Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1939
         (583 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           23   2.9  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           23   2.9  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   6.7  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    21   8.9  

>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 178 TWKYIRRNQIRAGIATKQHF 119
           TW  +R++++ +GIA    F
Sbjct: 35  TWAVVRKDEVASGIAVMTAF 54


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 178 TWKYIRRNQIRAGIATKQHF 119
           TW  +R++++ +GIA    F
Sbjct: 35  TWAVVRKDEVASGIAVMTAF 54


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 204 HSGERVILRRGNIYVETKSERGSQQNNTLSTVY 106
           H   RVI    NI ++    + +QQN  +   Y
Sbjct: 166 HLDSRVIQEAQNIAIQNTQGKNNQQNILIPVNY 198


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 318 ASSIHPPPT*AASTVGHL 265
           A+ IH   T AAS VG+L
Sbjct: 146 ATKIHAVDTYAASVVGYL 163


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,047
Number of Sequences: 438
Number of extensions: 2125
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)