Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1938
(588 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein. 39 0.015
L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein. 38 0.020
BC035621-1|AAH35621.1| 893|Homo sapiens chromosome 12 open read... 29 9.2
BC027450-1|AAH27450.1| 469|Homo sapiens SETD1A protein protein. 29 9.2
AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein. 29 9.2
>AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein.
Length = 1943
Score = 38.7 bits (86), Expect = 0.015
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 7/168 (4%)
Frame = -1
Query: 498 QQARSTSQLRV*RGRSMRRWLE-HREQSMSRKMVIHERLWTSKKILRKQLEKWSWSQPEM 322
QQ R QLR R + +RR + REQ R HE+ +++ R+Q E+ W + E
Sbjct: 405 QQLRREQQLR--REQQLRREQQLRREQEEERHEQKHEQERREQRLKREQEERRDWLKREE 462
Query: 321 QHKRTMVQWRTNMLGQ*HMS------MLVQQHKRRQEQQWS**RLEQHRRQRCGHRERCE 160
+ +R + R L + + +++ +RR++Q+ R EQ R+ R
Sbjct: 463 ETERHEQERRKQQLKRDQEEERRERWLKLEEEERREQQE----RREQQLRREQEERREQR 518
Query: 159 LSKKRPKTQLD*WF*LPQQEPR*CGCKPREQLRGDHQRGLRLQRTEQR 16
L ++ + +L QQ R + + L+ + ++ L +R EQR
Sbjct: 519 LKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQR 566
Score = 31.5 bits (68), Expect = 2.3
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 4/165 (2%)
Frame = -1
Query: 498 QQARSTSQLRV*RGRSMRRWLEHREQSMSRKMVIHERLWTSKKILRKQ-LEKWSWSQPEM 322
Q+ R QLR + R REQ R+ ++L +++ R+Q L + + E
Sbjct: 343 QEERREQQLRREQEEERREQQLRREQEEERR---EQQLRREQQLRREQQLRREQQLRREQ 399
Query: 321 QHKRTMVQWRTNMLGQ*HMSMLVQQHKRRQEQQWS**RLEQHRRQRCGHR---ERCELSK 151
Q +R R L + QQ +R QE++ + EQ RR++ R ER + K
Sbjct: 400 QLRREQQLRREQQLRREQQLRREQQLRREQEEERHEQKHEQERREQRLKREQEERRDWLK 459
Query: 150 KRPKTQLD*WF*LPQQEPR*CGCKPREQLRGDHQRGLRLQRTEQR 16
+ +T+ +QE R K R+Q +R L+L+ E+R
Sbjct: 460 REEETERH------EQERRKQQLK-RDQEEERRERWLKLEEEERR 497
>L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein.
Length = 1898
Score = 38.3 bits (85), Expect = 0.020
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 7/168 (4%)
Frame = -1
Query: 498 QQARSTSQLRV*RGRSMRRWLE-HREQSMSRKMVIHERLWTSKKILRKQLEKWSWSQPEM 322
QQ R QLR R + +RR + REQ R HE+ +++ R+Q E+ W + E
Sbjct: 424 QQLRREQQLR--REQQLRREQQLRREQEEERHEQKHEQERREQRLKREQEERRDWLKREE 481
Query: 321 QHKRTMVQWRTNMLGQ*HMS------MLVQQHKRRQEQQWS**RLEQHRRQRCGHRERCE 160
+ +R + R L + + +++ +RR++Q+ R EQ R+ R
Sbjct: 482 ETERHEQERRKQQLKRDQEEERRERWLKLEEEERREQQE----RREQQLRREQEERREQR 537
Query: 159 LSKKRPKTQLD*WF*LPQQEPR*CGCKPREQLRGDHQRGLRLQRTEQR 16
L ++ + +L QQ R + + L+ + ++ L +R EQR
Sbjct: 538 LKRQEEEERLQQRLRSEQQLRREQEERLEQLLKREEEKRLEQERREQR 585
Score = 30.3 bits (65), Expect = 5.3
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 4/166 (2%)
Frame = -1
Query: 501 RQQARSTSQLRV*RGRSMRRWLEHREQSMSRKMVIHERLWTSKKILRKQ-LEKWSWSQPE 325
R+Q Q R + +RR E E+ +++ ++L +++ R+Q L + + E
Sbjct: 360 REQQLRREQEEERREQQLRR--EQEEERREQQLRREQQLRREQQLRREQQLRREQQLRRE 417
Query: 324 MQHKRTMVQWRTNMLGQ*HMSMLVQQHKRRQEQQWS**RLEQHRRQRCGHR---ERCELS 154
Q +R R L + QQ +R QE++ + EQ RR++ R ER +
Sbjct: 418 QQLRREQQLRREQQLRREQQLRREQQLRREQEEERHEQKHEQERREQRLKREQEERRDWL 477
Query: 153 KKRPKTQLD*WF*LPQQEPR*CGCKPREQLRGDHQRGLRLQRTEQR 16
K+ +T+ +QE R K R+Q +R L+L+ E+R
Sbjct: 478 KREEETERH------EQERRKQQLK-RDQEEERRERWLKLEEEERR 516
>BC035621-1|AAH35621.1| 893|Homo sapiens chromosome 12 open reading
frame 25 protein.
Length = 893
Score = 29.5 bits (63), Expect = 9.2
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = -1
Query: 426 EQSMSRKMVIHERLWTSKKILRKQLEKWSWSQPEMQHKRTMVQWRTNMLGQ*HMSMLVQQ 247
E+ R+M +LW ++ + +Q +K W+ E +H+ + QW L + VQ
Sbjct: 481 EEEFGREM--RRQLWLEEEEMWQQRQK-KWALLEQEHQEKLRQWNLEDLAREQQRRWVQL 537
Query: 246 HKRRQ 232
K ++
Sbjct: 538 EKEQE 542
>BC027450-1|AAH27450.1| 469|Homo sapiens SETD1A protein protein.
Length = 469
Score = 29.5 bits (63), Expect = 9.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 379 RPQPLMDHHLSRHTLLTVLQPSPHTPPTLHPQ 474
RP+PL+ H L H ++P+P P P+
Sbjct: 50 RPRPLLSHILLEHNYALAVKPTPPAPALRPPE 81
>AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein.
Length = 1709
Score = 29.5 bits (63), Expect = 9.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 379 RPQPLMDHHLSRHTLLTVLQPSPHTPPTLHPQ 474
RP+PL+ H L H ++P+P P P+
Sbjct: 1290 RPRPLLSHILLEHNYALAVKPTPPAPALRPPE 1321
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,186,062
Number of Sequences: 237096
Number of extensions: 1291257
Number of successful extensions: 4496
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4491
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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