Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1935
(505 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 27 0.095
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 27 0.095
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 25 0.29
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 22 3.6
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 22 3.6
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 22 3.6
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 22 3.6
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 22 3.6
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 22 3.6
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 21 4.7
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 6.3
AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory recept... 21 6.3
AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory recept... 21 6.3
AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory recept... 21 6.3
AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve co... 21 8.3
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 27.1 bits (57), Expect = 0.095
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 157 NIFSVSETYQ*NLRFSV*RKSCSKALLRGTLLSDIIGITALY 282
N+FS+ +Q L FS +C L+ GTLL I+G +Y
Sbjct: 331 NLFSLQLAHQ-KLEFS----ACGFFLINGTLLHTIVGAVTVY 367
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor
candidate 25 protein.
Length = 314
Score = 27.1 bits (57), Expect = 0.095
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 157 NIFSVSETYQ*NLRFSV*RKSCSKALLRGTLLSDIIGITALY 282
N+FS+ +Q L FS +C L+ GTLL I+G +Y
Sbjct: 156 NLFSLQLAHQ-KLEFS----ACGFFLINGTLLHTIVGAVTVY 192
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 25.4 bits (53), Expect = 0.29
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1
Query: 409 VHSTTAVPPPLLISVTNSVGGPK 341
VHS+T VPPP S T S+ PK
Sbjct: 1799 VHSSTVVPPP-QHSTTQSLVDPK 1820
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.8 bits (44), Expect = 3.6
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -1
Query: 310 KHSRIYFPYCREPLFQLYLRVKFLVAKLYYNF 215
K + I + C EP + +K LYY F
Sbjct: 185 KKNTIVYACCPEPYVDVTFTIKIRRRTLYYFF 216
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.8 bits (44), Expect = 3.6
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -1
Query: 310 KHSRIYFPYCREPLFQLYLRVKFLVAKLYYNF 215
K + I + C EP + +K LYY F
Sbjct: 185 KKNTIVYACCPEPYVDVTFTIKIRRRTLYYFF 216
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.8 bits (44), Expect = 3.6
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -1
Query: 310 KHSRIYFPYCREPLFQLYLRVKFLVAKLYYNF 215
K + I + C EP + +K LYY F
Sbjct: 185 KKNTIVYACCPEPYVDVTFTIKIRRRTLYYFF 216
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.8 bits (44), Expect = 3.6
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -1
Query: 310 KHSRIYFPYCREPLFQLYLRVKFLVAKLYYNF 215
K + I + C EP + +K LYY F
Sbjct: 185 KKNTIVYACCPEPYVDVTFTIKIRRRTLYYFF 216
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.8 bits (44), Expect = 3.6
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -1
Query: 310 KHSRIYFPYCREPLFQLYLRVKFLVAKLYYNF 215
K + I + C EP + +K LYY F
Sbjct: 185 KKNTIVYACCPEPYVDVTFTIKIRRRTLYYFF 216
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 21.8 bits (44), Expect = 3.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 363 VTLMSSGGGTAVVEWTTRAVTS 428
V M+ GGTA+V +T TS
Sbjct: 287 VGTMTGAGGTAIVSISTSVSTS 308
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 21.4 bits (43), Expect = 4.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 367 VTNSVGGPKLRGRRLLNE 314
+TN +G KLRG R++ E
Sbjct: 286 ITNLLGYAKLRGVRIIIE 303
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.0 bits (42), Expect = 6.3
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +3
Query: 36 WYYEVEGSTRSSLIQI 83
WY VEG+TR + +
Sbjct: 266 WYKFVEGTTRKQAVTL 281
>AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory receptor
candidate 44 protein.
Length = 313
Score = 21.0 bits (42), Expect = 6.3
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -3
Query: 206 TLKRRFY**VSLTLKILFLFFGIY 135
T ++FY +L ++ LFLFF ++
Sbjct: 258 TYDKQFYIHNALIVRALFLFFQLW 281
>AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory receptor
candidate 31 protein.
Length = 250
Score = 21.0 bits (42), Expect = 6.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 436 LSLLVTARVVHSTTAVPPPLLISVTNS 356
+S+ + VHS ++ PLL SV++S
Sbjct: 209 ISVCLCGASVHSESSKVLPLLFSVSSS 235
>AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory receptor
candidate 4 protein.
Length = 309
Score = 21.0 bits (42), Expect = 6.3
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -3
Query: 206 TLKRRFY**VSLTLKILFLFFGIY 135
T ++FY +L ++ LFLFF ++
Sbjct: 254 TYDKQFYIHNALIVRALFLFFQLW 277
>AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve cord
defective protein protein.
Length = 168
Score = 20.6 bits (41), Expect = 8.3
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 145 KKRNNIFSVSETYQ*NLRF 201
+KR +FS ++TY+ RF
Sbjct: 41 RKRRVLFSKAQTYELERRF 59
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,757
Number of Sequences: 336
Number of extensions: 2806
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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