Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1935
(505 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118946-1|AAM50806.1| 470|Drosophila melanogaster LD31082p pro... 55 6e-08
AF221066-1|AAF32365.1| 470|Drosophila melanogaster kurtz arrest... 55 6e-08
AE014297-4839|AAF57212.1| 470|Drosophila melanogaster CG1487-PA... 55 6e-08
M32141-1|AAA28833.1| 401|Drosophila melanogaster phosphoprotein... 41 8e-04
BT024256-1|ABC86318.1| 209|Drosophila melanogaster IP15846p pro... 41 8e-04
BT021234-1|AAX33382.1| 390|Drosophila melanogaster RH28686p pro... 41 8e-04
AE014296-1502|AAF50380.1| 401|Drosophila melanogaster CG5962-PA... 41 8e-04
M30140-1|AAA28380.1| 364|Drosophila melanogaster protein ( D.me... 34 0.095
AY061824-1|AAL27635.1| 364|Drosophila melanogaster GH19095p pro... 34 0.095
AE014134-2899|AAF53644.1| 364|Drosophila melanogaster CG5711-PA... 34 0.095
BT011430-1|AAR99088.1| 804|Drosophila melanogaster RH70434p pro... 30 2.0
AE014298-1817|AAF48207.2| 633|Drosophila melanogaster CG4661-PA... 30 2.0
AE014298-1451|AAF46586.2| 804|Drosophila melanogaster CG32683-P... 30 2.0
BT025847-1|ABF85747.1| 268|Drosophila melanogaster IP14615p pro... 29 3.6
AE014297-895|AAF54351.1| 268|Drosophila melanogaster CG12952-PA... 29 3.6
BT003762-1|AAO41441.1| 918|Drosophila melanogaster RE34257p pro... 28 8.3
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 28 8.3
AE013599-1610|AAM68617.1| 918|Drosophila melanogaster CG3845-PB... 28 8.3
AE013599-1609|AAF58443.2| 918|Drosophila melanogaster CG3845-PA... 28 8.3
AE013599-1608|ABC66062.1| 1526|Drosophila melanogaster CG3845-PC... 28 8.3
AB096103-1|BAD83642.1| 1526|Drosophila melanogaster hypothetical... 28 8.3
>AY118946-1|AAM50806.1| 470|Drosophila melanogaster LD31082p
protein.
Length = 470
Score = 54.8 bits (126), Expect = 6e-08
Identities = 27/39 (69%), Positives = 31/39 (79%), Gaps = 2/39 (5%)
Frame = +2
Query: 395 GGRMDDAG--SNKQRQATRVFKKSSPNGKITVYLGKRDF 505
G D+ G ++ +RQATRVFKKSS NGKITVYLGKRDF
Sbjct: 30 GSAGDETGGDASSRRQATRVFKKSSSNGKITVYLGKRDF 68
>AF221066-1|AAF32365.1| 470|Drosophila melanogaster kurtz arrestin
protein.
Length = 470
Score = 54.8 bits (126), Expect = 6e-08
Identities = 27/39 (69%), Positives = 31/39 (79%), Gaps = 2/39 (5%)
Frame = +2
Query: 395 GGRMDDAG--SNKQRQATRVFKKSSPNGKITVYLGKRDF 505
G D+ G ++ +RQATRVFKKSS NGKITVYLGKRDF
Sbjct: 30 GSAGDETGGDASSRRQATRVFKKSSSNGKITVYLGKRDF 68
>AE014297-4839|AAF57212.1| 470|Drosophila melanogaster CG1487-PA
protein.
Length = 470
Score = 54.8 bits (126), Expect = 6e-08
Identities = 27/39 (69%), Positives = 31/39 (79%), Gaps = 2/39 (5%)
Frame = +2
Query: 395 GGRMDDAG--SNKQRQATRVFKKSSPNGKITVYLGKRDF 505
G D+ G ++ +RQATRVFKKSS NGKITVYLGKRDF
Sbjct: 30 GSAGDETGGDASSRRQATRVFKKSSSNGKITVYLGKRDF 68
>M32141-1|AAA28833.1| 401|Drosophila melanogaster phosphoprotein
protein.
Length = 401
Score = 41.1 bits (92), Expect = 8e-04
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = +2
Query: 437 ATRVFKKSSPNGKITVYLGKRDF 505
+ +VFKK++PNGK+T YLG+RDF
Sbjct: 4 SVKVFKKATPNGKVTFYLGRRDF 26
>BT024256-1|ABC86318.1| 209|Drosophila melanogaster IP15846p
protein.
Length = 209
Score = 41.1 bits (92), Expect = 8e-04
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = +2
Query: 437 ATRVFKKSSPNGKITVYLGKRDF 505
+ +VFKK++PNGK+T YLG+RDF
Sbjct: 4 SVKVFKKATPNGKVTFYLGRRDF 26
>BT021234-1|AAX33382.1| 390|Drosophila melanogaster RH28686p
protein.
Length = 390
Score = 41.1 bits (92), Expect = 8e-04
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = +2
Query: 437 ATRVFKKSSPNGKITVYLGKRDF 505
+ +VFKK++PNGK+T YLG+RDF
Sbjct: 4 SVKVFKKATPNGKVTFYLGRRDF 26
>AE014296-1502|AAF50380.1| 401|Drosophila melanogaster CG5962-PA
protein.
Length = 401
Score = 41.1 bits (92), Expect = 8e-04
Identities = 15/23 (65%), Positives = 21/23 (91%)
Frame = +2
Query: 437 ATRVFKKSSPNGKITVYLGKRDF 505
+ +VFKK++PNGK+T YLG+RDF
Sbjct: 4 SVKVFKKATPNGKVTFYLGRRDF 26
>M30140-1|AAA28380.1| 364|Drosophila melanogaster protein (
D.melanogaster arrestin(Arr) gene, complete cds. ).
Length = 364
Score = 34.3 bits (75), Expect = 0.095
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 443 RVFKKSSPNGKITVYLGKRDF 505
+VFKK SPN IT+Y+ +RDF
Sbjct: 6 KVFKKCSPNNMITLYMNRRDF 26
>AY061824-1|AAL27635.1| 364|Drosophila melanogaster GH19095p
protein.
Length = 364
Score = 34.3 bits (75), Expect = 0.095
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 443 RVFKKSSPNGKITVYLGKRDF 505
+VFKK SPN IT+Y+ +RDF
Sbjct: 6 KVFKKCSPNNMITLYMNRRDF 26
>AE014134-2899|AAF53644.1| 364|Drosophila melanogaster CG5711-PA
protein.
Length = 364
Score = 34.3 bits (75), Expect = 0.095
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 443 RVFKKSSPNGKITVYLGKRDF 505
+VFKK SPN IT+Y+ +RDF
Sbjct: 6 KVFKKCSPNNMITLYMNRRDF 26
>BT011430-1|AAR99088.1| 804|Drosophila melanogaster RH70434p
protein.
Length = 804
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 362 RDTDEQRWWNRGGRMDDAGSNKQRQATRVFKKSSPNGKITVYLGKRD 502
RD D +R D+ G+ RV+KK+SPN +T+YL R+
Sbjct: 82 RDRDRDSHGDRSTHRDEFGTQ------RVYKKTSPNCVLTLYLPTRE 122
>AE014298-1817|AAF48207.2| 633|Drosophila melanogaster CG4661-PA
protein.
Length = 633
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 389 NRGGRMDDAGSNKQRQATRVFKKSSPNGKITVYLGKRD 502
+R + D + KQ+ +R+F+K PNGK V G D
Sbjct: 584 SRNNQADRTENMKQQFESRIFRKPQPNGKAAVGGGMGD 621
>AE014298-1451|AAF46586.2| 804|Drosophila melanogaster CG32683-PA
protein.
Length = 804
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 362 RDTDEQRWWNRGGRMDDAGSNKQRQATRVFKKSSPNGKITVYLGKRD 502
RD D +R D+ G+ RV+KK+SPN +T+YL R+
Sbjct: 82 RDRDRDSHGDRSTHRDEFGTQ------RVYKKTSPNCVLTLYLPTRE 122
>BT025847-1|ABF85747.1| 268|Drosophila melanogaster IP14615p
protein.
Length = 268
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = -1
Query: 424 VTARVVHSTTAVP---PPLLISVTNSVGGPKLRG 332
+T +++ ST VP PP+L+ V+ + GGP L G
Sbjct: 1 MTDQLLSSTAGVPGDPPPVLVPVSATTGGPYLSG 34
>AE014297-895|AAF54351.1| 268|Drosophila melanogaster CG12952-PA,
isoform A protein.
Length = 268
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = -1
Query: 424 VTARVVHSTTAVP---PPLLISVTNSVGGPKLRG 332
+T +++ ST VP PP+L+ V+ + GGP L G
Sbjct: 1 MTDQLLSSTAGVPGDPPPVLVPVSATTGGPYLSG 34
>BT003762-1|AAO41441.1| 918|Drosophila melanogaster RE34257p
protein.
Length = 918
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +2
Query: 335 SEFWTANGVRDTDEQRWWNRGGR---MDDAGSNKQRQATRVFKKSSPNG 472
S F T+N RD D +++ NRG R D GS R + K + NG
Sbjct: 250 SPFATSNRDRDRDNRQYNNRGDRNRDRDQGGSGGANYGNR-YNKHNQNG 297
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 436 LSLLVTARVVHSTTAVPPPLLISVTNSVGGPKLRGRRLL 320
LS AR A+ L + +VGGP+L RRLL
Sbjct: 728 LSFKAHARYASKKAAMTAAALARIMPNVGGPRLPARRLL 766
>AE013599-1610|AAM68617.1| 918|Drosophila melanogaster CG3845-PB,
isoform B protein.
Length = 918
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +2
Query: 335 SEFWTANGVRDTDEQRWWNRGGR---MDDAGSNKQRQATRVFKKSSPNG 472
S F T+N RD D +++ NRG R D GS R + K + NG
Sbjct: 250 SPFATSNRDRDRDNRQYNNRGDRNRDRDQGGSGGANYGNR-YNKHNQNG 297
>AE013599-1609|AAF58443.2| 918|Drosophila melanogaster CG3845-PA,
isoform A protein.
Length = 918
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +2
Query: 335 SEFWTANGVRDTDEQRWWNRGGR---MDDAGSNKQRQATRVFKKSSPNG 472
S F T+N RD D +++ NRG R D GS R + K + NG
Sbjct: 250 SPFATSNRDRDRDNRQYNNRGDRNRDRDQGGSGGANYGNR-YNKHNQNG 297
>AE013599-1608|ABC66062.1| 1526|Drosophila melanogaster CG3845-PC,
isoform C protein.
Length = 1526
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +2
Query: 335 SEFWTANGVRDTDEQRWWNRGGR---MDDAGSNKQRQATRVFKKSSPNG 472
S F T+N RD D +++ NRG R D GS R + K + NG
Sbjct: 858 SPFATSNRDRDRDNRQYNNRGDRNRDRDQGGSGGANYGNR-YNKHNQNG 905
>AB096103-1|BAD83642.1| 1526|Drosophila melanogaster hypothetical
protein protein.
Length = 1526
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +2
Query: 335 SEFWTANGVRDTDEQRWWNRGGR---MDDAGSNKQRQATRVFKKSSPNG 472
S F T+N RD D +++ NRG R D GS R + K + NG
Sbjct: 858 SPFATSNRDRDRDNRQYNNRGDRNRDRDQGGSGGANYGNR-YNKHNQNG 905
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,499,229
Number of Sequences: 53049
Number of extensions: 480198
Number of successful extensions: 1333
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1333
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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