Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1935
(505 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 2.4
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 2.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 2.4
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 23 2.4
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 4.2
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 4.2
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 4.2
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 4.2
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 22 4.2
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 4.2
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 21 5.5
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 21 5.5
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 5.5
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 9.6
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 9.6
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.6 bits (46), Expect = 2.4
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -1
Query: 433 SLLVTARVVHSTTAVPPPLLISVTNSVGGPKLRGRRLLNESKHSRIYFPY 284
++L++ R STT PP K R R LN + SR++FP+
Sbjct: 370 AMLLSGRSQKSTTGPPP-------GPTPAQKAR-MRALNIDRVSRVFFPF 411
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.6 bits (46), Expect = 2.4
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = -1
Query: 310 KHSRIYFPYCREPLFQLYLRVKFLVAKLYYNF 215
K + IY+ C EP + V LYY F
Sbjct: 205 KRNEIYYNCCPEPYIDITFVVIIRRRTLYYFF 236
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.6 bits (46), Expect = 2.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 463 RALLEDSSGLSLLVTARVVHSTTAVPPPLLIS 368
R + + L+VTA+ VHS P +IS
Sbjct: 276 RTTEQQHKAMFLVVTAQPVHSAYKAPEETIIS 307
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 306 CLDSFSKRRPRSFGPPT 356
CLD+ S RR G PT
Sbjct: 645 CLDASSSRRGSKIGSPT 661
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 4.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 343 KLRGRRLLNESKHSRIYFPYC 281
KL G + K+SRI FP C
Sbjct: 395 KLYGMTPSDIDKYSRIVFPVC 415
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 4.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 343 KLRGRRLLNESKHSRIYFPYC 281
KL G + K+SRI FP C
Sbjct: 395 KLYGMTPSDIDKYSRIVFPVC 415
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.8 bits (44), Expect = 4.2
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 25 DGYSGTTKWKVVH 63
D Y+ T+W++VH
Sbjct: 200 DMYNNNTEWEIVH 212
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.8 bits (44), Expect = 4.2
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -1
Query: 310 KHSRIYFPYCREPLFQLYLRVKFLVAKLYY 221
+H + Y+P C EP ++ + L+Y
Sbjct: 210 RHKK-YYPCCDEPYPDIFFNITLRRKTLFY 238
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 21.8 bits (44), Expect = 4.2
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1
Query: 91 FYVPHHGVPKFLLGV*IPKKRNNIFSVSETY 183
+Y+ H V + G+ +P NNIF E +
Sbjct: 78 YYIYHTLVAEQSYGLTLPSWTNNIFPKGELF 108
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.8 bits (44), Expect = 4.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 343 KLRGRRLLNESKHSRIYFPYC 281
KL G + K+SRI FP C
Sbjct: 333 KLYGMTPSDIDKYSRIVFPVC 353
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 21.4 bits (43), Expect = 5.5
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1
Query: 91 FYVPHHGVPKFLLGV*IPKKRNNIFSVSETY 183
+Y+ H V + G+ +P NNIF E +
Sbjct: 175 YYIYHTLVAEQSYGLTLPSWTNNIFPRGELF 205
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 21.4 bits (43), Expect = 5.5
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1
Query: 91 FYVPHHGVPKFLLGV*IPKKRNNIFSVSETY 183
+Y+ H V + G+ +P NNIF E +
Sbjct: 190 YYIYHTLVAEQSYGLTLPSWTNNIFPRGELF 220
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 5.5
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +3
Query: 36 WYYEVEGSTRSSLIQI 83
WY +EGS+R +Q+
Sbjct: 246 WYKFIEGSSRRQPVQL 261
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 20.6 bits (41), Expect = 9.6
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = -2
Query: 78 VLGYFVYYLPLRSTTISIQSHITLLE 1
++GY+ STT+S+++ I+ +E
Sbjct: 1 MVGYYQMKQITNSTTMSVKNEISTVE 26
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 20.6 bits (41), Expect = 9.6
Identities = 7/25 (28%), Positives = 11/25 (44%)
Frame = -1
Query: 295 YFPYCREPLFQLYLRVKFLVAKLYY 221
Y+P C EP + + L+Y
Sbjct: 228 YYPCCTEPYSDITFNITMRRKTLFY 252
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,995
Number of Sequences: 438
Number of extensions: 3202
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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