Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1933
         (539 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   3.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   3.5  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   3.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   4.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   4.6  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -1

Query: 404 LYFSVIFLMITFYYIVKESYGYYKTIDLLF 315
           ++FS+   ++ +Y+  KE+   Y T +L F
Sbjct: 416 VFFSIYKTILDYYHKYKENLPKYTTEELNF 445


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -1

Query: 404 LYFSVIFLMITFYYIVKESYGYYKTIDLLF 315
           ++FS+   ++ +Y+  KE+   Y T +L F
Sbjct: 416 VFFSIYKTILDYYHKYKENLPKYTTEELNF 445


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -1

Query: 404 LYFSVIFLMITFYYIVKESYGYYKTIDLLF 315
           ++FS+   ++ +Y+  KE+   Y T +L F
Sbjct: 42  VFFSIYKTILDYYHKYKENLPKYTTEELNF 71


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -1

Query: 464 LQQTQLWRLQHLLYTNNS 411
           L +++  RLQ+ LYTN+S
Sbjct: 200 LTESEQHRLQNRLYTNDS 217


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -1

Query: 464 LQQTQLWRLQHLLYTNNS 411
           L +++  RLQ+ LYTN+S
Sbjct: 238 LTESEQHRLQNRLYTNDS 255


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,750
Number of Sequences: 438
Number of extensions: 2959
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)