Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1932
         (392 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    20   7.6  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    20   7.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   7.6  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 263 LILSRLFIQLNASEGDRHYINKFKG 189
           L + R+FI  N  E    Y+N  KG
Sbjct: 352 LYVRRVFIMDNCEELIPEYLNFIKG 376


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 310 NYYTLCILSR 339
           NYY  C+LS+
Sbjct: 41  NYYAACLLSK 50


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 136  SFIRKLSAVFTNQTYLYTAS 77
            +F+R+LSA F  +  L +A+
Sbjct: 2465 AFVRELSAAFKPKNLLLSAA 2484


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,923
Number of Sequences: 336
Number of extensions: 1516
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8330471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)