Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1931
         (511 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    28   0.16 
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    27   0.49 
AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.    24   2.6  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 28.3 bits (60), Expect = 0.16
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = -1

Query: 493 CVCGISCEWCSMRSISCNRCGNGVSRYRSDSF 398
           C+   +C WC+M + +  RC   + +Y  + +
Sbjct: 45  CIQTTNCRWCTMPNFTHPRCHGQIEKYCPEEY 76


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 26.6 bits (56), Expect = 0.49
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -3

Query: 506 KQQGLRVRHKLRVVQHAQHKLQQVRQRRKSLQER 405
           +QQ LR R + R  Q  Q + QQ +Q+++  Q+R
Sbjct: 175 RQQRLRRRERERQQQQQQQQQQQQQQQQQQQQQR 208



 Score = 25.4 bits (53), Expect = 1.1
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = -3

Query: 506 KQQGLRVRHKLRVVQHAQHKLQQVRQRRKSLQER 405
           +QQ  + +H+ +  Q  Q + QQ RQ+++  Q+R
Sbjct: 303 RQQRQQQQHQQQQQQQQQQRQQQQRQQQRQQQQR 336


>AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.
          Length = 144

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = -1

Query: 469 WCSMRSISCNRCGNGVSRYRSDSFGEE 389
           WC+   +  N C    S  R D  G++
Sbjct: 79  WCAEGKVGANECKLQCSSLRDDDIGDD 105


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 291,294
Number of Sequences: 2352
Number of extensions: 3021
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46091631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)