Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1929
         (490 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73976-2|CAA98285.1|  360|Caenorhabditis elegans Hypothetical pr...    27   5.5  
AC025726-27|AAK73932.2|  383|Caenorhabditis elegans Hypothetical...    27   7.3  

>Z73976-2|CAA98285.1|  360|Caenorhabditis elegans Hypothetical
           protein T07C12.6 protein.
          Length = 360

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 11  PPFLDKYVGSCLHFNFIIFLLISDYST 91
           PPFL  +V +C++ N  +   ++ YST
Sbjct: 280 PPFLCHFVENCIYLNPFLICTVTMYST 306


>AC025726-27|AAK73932.2|  383|Caenorhabditis elegans Hypothetical
           protein Y71G12B.6 protein.
          Length = 383

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = -2

Query: 174 NLLLLHMRRQYPFELINPLSSSLINV*NVL*SEINKKIIK 55
           N++LLH     P  LIN  S +LIN+     S IN++ IK
Sbjct: 26  NVVLLHNNEAIPTNLINNPSLTLINL-----SSINEEAIK 60


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,444,876
Number of Sequences: 27780
Number of extensions: 199344
Number of successful extensions: 374
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 374
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)