Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1928
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     25   0.45 
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.4  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   4.2  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   7.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.3  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   9.7  

>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
 Frame = +2

Query: 479 RILRTTVRQEPGIG----LKRRHVGTLQRDCACRCAWP 580
           RILR     +PG+     L  +   TL RDC    +WP
Sbjct: 1   RILRGLGAIQPGVNRCKLLSCKDFDTLYRDCTTASSWP 38


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +1

Query: 370 TSTLRSSTMLSQELEPTKKPSSRSCARFPTMVSVP 474
           ++T+ +S+     + PT   +S SC   P+M   P
Sbjct: 10  STTMATSSNAMSPMTPTYSMNSMSCVSMPSMNCSP 44


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +3

Query: 417  DEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGH 545
            D ++  +++C  +N+      A+Y Q  GK L SD+  D   H
Sbjct: 1818 DPKSEFKVVCYFTNW------AWYRQGVGKYLPSDIDPDLCTH 1854


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 595 QGIDEGSTKADAEALARRW*RSMGEPDEINLQ 690
           +GI + ST     A++R      GE DEI +Q
Sbjct: 143 EGICDRSTAPSVSAISRLLRGKGGECDEITIQ 174


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -2

Query: 662 IDLHQRRASASASALVEPSSMPWFSSRLA 576
           + + +R   +S+  L EP    WF +R A
Sbjct: 140 LSIAERAEFSSSLRLTEPQVKIWFQNRRA 168


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 82  LRFFCLTATHPTTEDRREFRN 20
           +R++C TAT    ++  EF N
Sbjct: 291 MRWYCQTATMEEKQELYEFSN 311


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 109 TSAPPRCTPRSLSTRPRMPRP 171
           + A P   PRS++T   +P P
Sbjct: 207 SKASPAAAPRSVATPTGIPTP 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,199
Number of Sequences: 336
Number of extensions: 3689
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)