Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1928
(699 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0782 - 31716860-31717150,31717400-31717612,31718497-317186... 73 2e-13
09_04_0008 + 13651997-13652072,13652440-13652541,13653138-136531... 71 9e-13
01_05_0009 - 17101633-17101836,17101948-17102040,17102122-171023... 69 3e-12
06_01_0830 + 6261629-6261704,6261829-6261974,6262086-6262310,626... 66 3e-11
05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 61 7e-10
08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107 57 1e-08
09_03_0079 + 12142390-12142459,12142792-12143006,12143050-121432... 44 2e-04
09_04_0360 - 16944990-16945202,16945288-16945377,16945525-169457... 41 8e-04
04_03_0920 + 20826876-20829293 31 0.88
06_01_0820 + 6202348-6203313 31 1.2
12_01_0471 - 3672309-3672740,3673159-3673251,3673271-3673399,367... 29 2.7
05_07_0015 + 27065104-27065428,27065539-27066257 29 2.7
09_04_0202 - 15544498-15545037,15546043-15546449,15546874-155469... 29 3.5
04_03_0923 + 20843477-20845044,20846081-20846996 29 3.5
05_01_0267 + 2050854-2051682,2051864-2051921,2052518-2052608 29 4.7
12_01_0461 + 3618414-3618782,3619664-3619794,3620177-3620294,362... 28 8.2
10_01_0167 + 1876793-1877402,1877423-1877642,1877760-1879534,188... 28 8.2
03_05_0721 + 27134277-27134666,27135401-27135466,27137036-271371... 28 8.2
02_05_1224 + 35045268-35045270,35045735-35045863,35046037-350461... 28 8.2
>02_05_0782 -
31716860-31717150,31717400-31717612,31718497-31718642,
31718742-31718817
Length = 241
Score = 73.3 bits (172), Expect = 2e-13
Identities = 47/145 (32%), Positives = 68/145 (46%), Gaps = 11/145 (7%)
Frame = +3
Query: 171 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 350
LRKA KG+GT+EK II +L R QR I + YG++L+ L E+ G E ++V
Sbjct: 20 LRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHGKFE-LLVP 78
Query: 351 LM-----------TPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQL 497
L+ T L H AK LH+ + ++ II IL T S + Y
Sbjct: 79 LVTVYRYDGPEVNTSLAHSEAKILHEKIHDKAYSDDEIIRILTTRSKAQLLATFNSYNDQ 138
Query: 498 YGKSLESDLKGDTSGHFKEIVRVVV 572
+G + DLK D F +R ++
Sbjct: 139 FGHPITKDLKADPKDEFLGTLRAII 163
Score = 53.2 bits (122), Expect = 2e-07
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Frame = +3
Query: 186 KGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYG----KDLISELKSELTGNLENVIVAL 353
K + DE II +L R Q L ++ +G KDL ++ K E G L +I
Sbjct: 109 KAYSDDE--IIRILTTRSKAQLLATFNSYNDQFGHPITKDLKADPKDEFLGTLRAIIRCF 166
Query: 354 MTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGD 533
P ++ K + A+ G+GTDE ++ I+ T + ++ I Y++ LE + D
Sbjct: 167 TCP-DRYFEKVIRLALGGMGTDENSLTRIITTRAEVDLKLIKEAYQKRNSVPLERAVAKD 225
Query: 534 TSGHFKEIV 560
T+ +++I+
Sbjct: 226 TTRDYEDIL 234
Score = 35.1 bits (77), Expect = 0.054
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +3
Query: 381 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKEIV 560
++L A G GT+E+ II IL R I Y + YG+ L L + G F+ +V
Sbjct: 18 EQLRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHGKFELLV 77
Query: 561 RVV 569
+V
Sbjct: 78 PLV 80
Score = 32.3 bits (70), Expect = 0.38
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +3
Query: 171 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 350
+R A+ G GTDE ++ ++ R V I E ++ L + + T + E++++A
Sbjct: 177 IRLALGGMGTDENSLTRIITTRAEVDLKLIKEAYQKRNSVPLERAVAKDTTRDYEDILLA 236
Query: 351 LM 356
L+
Sbjct: 237 LL 238
>09_04_0008 +
13651997-13652072,13652440-13652541,13653138-13653142,
13653970-13654188,13654686-13654901,13654989-13655078,
13656307-13656507
Length = 302
Score = 70.9 bits (166), Expect = 9e-13
Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Frame = +3
Query: 186 KGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALMTPL 365
K GTDEK I + R +A + Y + L +KSE +GN E ++ ++
Sbjct: 168 KRLGTDEKTFIRIFTERSWAHMASVASAYHHMYDRSLEKVVKSETSGNFELALLTILRCA 227
Query: 366 PH---FYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDT 536
+ ++AK L ++ G+GTD+ +I ++ T + ++ I A Y + Y KSL + +T
Sbjct: 228 ENPAKYFAKVLRKSMKGMGTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKKSLAEAIHSET 287
Query: 537 SGHFKEIVRVVV 572
SG+++ + +V
Sbjct: 288 SGNYRTFLLSLV 299
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +3
Query: 171 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 350
LRK+MKG GTD+ +I V+ R + I + Y K L + SE +GN +++
Sbjct: 238 LRKSMKGMGTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKKSLAEAIHSETSGNYRTFLLS 297
Query: 351 LM 356
L+
Sbjct: 298 LV 299
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +3
Query: 378 AKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKEI 557
A L +A+SG D A EI+C+ + ++ + Y +G LE D+ TSG +++
Sbjct: 76 ATVLREALSGDTIDLRAATEIICSRTPSQLQIMKQTYHAKFGTYLEHDIGQRTSGDHQKL 135
Query: 558 VRVVV 572
+ V
Sbjct: 136 LLAYV 140
>01_05_0009 -
17101633-17101836,17101948-17102040,17102122-17102334,
17102514-17102651,17102764-17102909,17106264-17106339
Length = 289
Score = 69.3 bits (162), Expect = 3e-12
Identities = 38/96 (39%), Positives = 56/96 (58%)
Frame = +3
Query: 171 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 350
L KA +G+GTDE+A+I VL R QR +I T++ NY ++LI L+SEL+G+LE +
Sbjct: 20 LLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENYNENLIQRLQSELSGDLERAMYH 79
Query: 351 LMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSN 458
+ A ++ A I D I+EI CT S+
Sbjct: 80 WVLDPVERQAVMVNTATKCIHEDYAVIVEIACTNSS 115
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/71 (32%), Positives = 36/71 (50%)
Frame = +3
Query: 330 LENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKS 509
+ ++V +TP P A L A G GTDE+A+I +L + I YE+ Y ++
Sbjct: 1 MATIVVPPVTPSPAEDADALLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENYNEN 60
Query: 510 LESDLKGDTSG 542
L L+ + SG
Sbjct: 61 LIQRLQSELSG 71
>06_01_0830 +
6261629-6261704,6261829-6261974,6262086-6262310,
6262910-6263122,6264007-6264300
Length = 317
Score = 66.1 bits (154), Expect = 3e-11
Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
Frame = +3
Query: 171 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 350
LRKA +G+GT+E II +L R QR I + YG++L+ + E++G+ E ++
Sbjct: 20 LRKAFQGWGTNEALIISILAHRDAAQRRAIRRAYADTYGEELLRSITDEISGDFERAVI- 78
Query: 351 LMTPLPHFYAKELHDAVSG---IGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESD 521
L T P L + V+ G+ ++EI C + + Y + + +SLE D
Sbjct: 79 LWTLDPAERDAVLANEVARKWYPGSGSRVLVEIACARGPAQLFAVRQAYHERFKRSLEED 138
Query: 522 LKGDTSGHFKEIV 560
+ +G F++++
Sbjct: 139 VAAHATGDFRKLL 151
Score = 60.9 bits (141), Expect = 1e-09
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Frame = +3
Query: 186 KGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYG----KDLISELKSELTGNLENVIVAL 353
K +G DE II +L R Q + + YG KDL ++ K E L +I
Sbjct: 184 KAYGDDE--IIRILTTRSKAQLIATFNRYNDEYGHPINKDLKADPKDEFLSTLRAIIRCF 241
Query: 354 MTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGD 533
P ++ K + A++G+GTDE ++ I+ T + ++ I+ Y++ LE + GD
Sbjct: 242 CCP-DRYFEKVIRLAIAGMGTDENSLTRIITTRAEVDLKLITEAYQKRNSVPLERAVAGD 300
Query: 534 TSGHFKEIVRVVVHGQSR 587
TSG ++ ++ ++ GQ +
Sbjct: 301 TSGDYERMLLALL-GQEQ 317
Score = 54.8 bits (126), Expect = 6e-08
Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 11/137 (8%)
Frame = +3
Query: 195 GTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALM------ 356
G+ + ++++ C RG Q + + + + + L ++ + TG+ ++V L+
Sbjct: 102 GSGSRVLVEIACARGPAQLFAVRQAYHERFKRSLEEDVAAHATGDFRKLLVPLISAYRYE 161
Query: 357 -----TPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESD 521
T L H AK LH+ + ++ II IL T S + Y YG + D
Sbjct: 162 GPEVNTKLAHSEAKILHEKIQHKAYGDDEIIRILTTRSKAQLIATFNRYNDEYGHPINKD 221
Query: 522 LKGDTSGHFKEIVRVVV 572
LK D F +R ++
Sbjct: 222 LKADPKDEFLSTLRAII 238
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +3
Query: 384 ELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKEIV 560
+L A G GT+E II IL R I Y YG+ L + + SG F+ V
Sbjct: 19 QLRKAFQGWGTNEALIISILAHRDAAQRRAIRRAYADTYGEELLRSITDEISGDFERAV 77
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +3
Query: 171 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 350
+R A+ G GTDE ++ ++ R V I E ++ L + + +G+ E +++A
Sbjct: 252 IRLAIAGMGTDENSLTRIITTRAEVDLKLITEAYQKRNSVPLERAVAGDTSGDYERMLLA 311
Query: 351 LM 356
L+
Sbjct: 312 LL 313
>05_04_0139 +
18355597-18355696,18356665-18356778,18357118-18357263,
18357365-18357910,18358397-18358600
Length = 369
Score = 61.3 bits (142), Expect = 7e-10
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Frame = +3
Query: 168 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIV 347
++RKA++G+GTDE A+I++L R QR EIA ++ Y + L+ L SEL+G+ + ++
Sbjct: 65 SIRKAVQGWGTDENALIEILGHRTAAQRAEIAVAYEGLYDETLLDRLHSELSGDFRSALM 124
Query: 348 ALMTPLPHFYAKELHDAVSGIGTDE----EAIIEILCTLSNYGIRTISAFYEQLYGKSLE 515
AK ++A+ E ++E+ C S + + Y Y SLE
Sbjct: 125 LWTMDPAARDAKLANEALKKKKKGELRHIWVLVEVACASSPDHLVAVRKAYRAAYASSLE 184
Query: 516 SDL 524
D+
Sbjct: 185 EDV 187
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/124 (22%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Frame = +3
Query: 213 IIDVLCRRGIVQRLEIAETFKTNYGKDLISELKS----ELTGNLENVIVALMTPLPHFYA 380
++ ++ R Q E ++ +GK + L +L L+ + L +P HF A
Sbjct: 243 VVRIVGTRSKAQLAVTLERYRQEHGKGIDEVLDGRRGDQLAAVLKAALWCLTSPEKHF-A 301
Query: 381 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKEIV 560
+ + ++ G+GTDEE + + + + + + Y+ Y ++ +D++GDTSG++ +
Sbjct: 302 EVIRTSILGLGTDEEMLTRGIVSRAEVDMEKVKEEYKVRYNTTVTADVRGDTSGYYMNTL 361
Query: 561 RVVV 572
+V
Sbjct: 362 LTLV 365
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/74 (35%), Positives = 38/74 (51%)
Frame = +3
Query: 330 LENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKS 509
+ ++ V P P A+ + AV G GTDE A+IEIL + I+ YE LY ++
Sbjct: 47 MASISVPNPAPSPTEDAESIRKAVQGWGTDENALIEILGHRTAAQRAEIAVAYEGLYDET 106
Query: 510 LESDLKGDTSGHFK 551
L L + SG F+
Sbjct: 107 LLDRLHSELSGDFR 120
Score = 36.3 bits (80), Expect = 0.023
Identities = 15/64 (23%), Positives = 34/64 (53%)
Frame = +3
Query: 171 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 350
+R ++ G GTDE+ + + R V ++ E +K Y + ++++ + +G N ++
Sbjct: 304 IRTSILGLGTDEEMLTRGIVSRAEVDMEKVKEEYKVRYNTTVTADVRGDTSGYYMNTLLT 363
Query: 351 LMTP 362
L+ P
Sbjct: 364 LVGP 367
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 378 AKELHDAVSGIG--TDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFK 551
A ELHDAV G G + ++ I+ T S + Y Q +GK ++ L G
Sbjct: 224 AAELHDAVVGRGQALHGDDVVRIVGTRSKAQLAVTLERYRQEHGKGIDEVLDGRRGDQLA 283
Query: 552 EIVRVVV 572
+++ +
Sbjct: 284 AVLKAAL 290
>08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107
Length = 346
Score = 57.2 bits (132), Expect = 1e-08
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 4/134 (2%)
Frame = +3
Query: 171 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 350
L +A KGFG D A+ +L R QR I + Y +DL+ L +EL+G+ + ++
Sbjct: 20 LHRAFKGFGCDATAVTAILAHRDASQRALIRRHYAAVYHQDLLHRLAAELSGHHKRAVLL 79
Query: 351 LMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLY----GKSLES 518
+ A LH A++G TD A E++C+ + + + Y + G LE
Sbjct: 80 WVLDPASRDAAVLHQALNGDVTDMRAATEVVCSRTPSQLLVVRQAYLARFGGGGGGGLEH 139
Query: 519 DLKGDTSGHFKEIV 560
D+ SG + ++
Sbjct: 140 DVAVRASGDHQRLL 153
Score = 51.6 bits (118), Expect = 6e-07
Identities = 29/98 (29%), Positives = 57/98 (58%), Gaps = 4/98 (4%)
Frame = +3
Query: 306 LKSELTGN----LENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRT 473
+KSE +GN L ++ +P +F AK LH+A+ G+GT++ +I ++ T + ++
Sbjct: 251 VKSETSGNFGFGLLTILRCAESPAKYF-AKVLHEAMKGLGTNDTTLIRVVTTRAEVDMQY 309
Query: 474 ISAFYEQLYGKSLESDLKGDTSGHFKEIVRVVVHGQSR 587
I A Y + Y +SL + +TSG+++ + ++ G+ R
Sbjct: 310 IKAEYHRSYKRSLADAVHSETSGNYRTFLLSLI-GRDR 346
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +3
Query: 171 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 350
L +AMKG GT++ +I V+ R V I + +Y + L + SE +GN +++
Sbjct: 281 LHEAMKGLGTNDTTLIRVVTTRAEVDMQYIKAEYHRSYKRSLADAVHSETSGNYRTFLLS 340
Query: 351 LM 356
L+
Sbjct: 341 LI 342
Score = 35.5 bits (78), Expect = 0.041
Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 18/133 (13%)
Frame = +3
Query: 171 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKD----LISELKSELTGNLEN 338
L +A+ G TD +A +V+C R Q L + + + +G L ++ +G+ +
Sbjct: 92 LHQALNGDVTDMRAATEVVCSRTPSQLLVVRQAYLARFGGGGGGGLEHDVAVRASGDHQR 151
Query: 339 VIVALMTPLPHFYAKELHDAVSG--------------IGTDEEAIIEILCTLSNYGIRTI 476
+++A + P + E+ D + +GTDE I + S + +
Sbjct: 152 LLLAYLRS-PRYEGPEVVDMAAAARDARELYRAGERRLGTDERTFIRVFSERSAAHMAAV 210
Query: 477 SAFYEQLYGKSLE 515
+A Y +Y +SLE
Sbjct: 211 AAAYHHMYDRSLE 223
Score = 32.3 bits (70), Expect = 0.38
Identities = 21/65 (32%), Positives = 26/65 (40%)
Frame = +3
Query: 366 PHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGH 545
P A +LH A G G D A+ IL I Y +Y + L L + SGH
Sbjct: 13 PRRDAIDLHRAFKGFGCDATAVTAILAHRDASQRALIRRHYAAVYHQDLLHRLAAELSGH 72
Query: 546 FKEIV 560
K V
Sbjct: 73 HKRAV 77
>09_03_0079 +
12142390-12142459,12142792-12143006,12143050-12143268,
12143345-12143932
Length = 363
Score = 43.6 bits (98), Expect = 2e-04
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
Frame = +3
Query: 231 RRGIVQRLEIAET-FKTNYGKD-LISELKSELTGNLENVIVALMTPLPHFYAKEL-HDAV 401
R+ ++Q L +T F D L+S+ S L+G++ + L P ++ DA+
Sbjct: 58 RQDLIQLLSQQKTTFAVIPASDPLVSKHISILSGSIAIRVACLRASEPCVRDADIARDAL 117
Query: 402 SGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKEIV 560
G D + ++E++CT + + I Y+ Y SLE D+ TSG E++
Sbjct: 118 FGRRIDGDVLVEVVCTRPSGEVALIRQAYQARYSASLERDVSSRTSGSLNEVL 170
>09_04_0360 -
16944990-16945202,16945288-16945377,16945525-16945746,
16945854-16946081,16946163-16946372
Length = 320
Score = 41.1 bits (92), Expect = 8e-04
Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 14/142 (9%)
Frame = +3
Query: 189 GFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLEN-VIVALMTPL 365
G TD + ++++ RR Q + + + K+L ++ +E + + ++VAL T
Sbjct: 97 GGATDYRVLVEIFTRRKQNQLFFTNQAYLARFKKNLEQDMVTEPSHPYQRQLLVALATSH 156
Query: 366 PHFY-----------AKELHDAV-SGIGT-DEEAIIEILCTLSNYGIRTISAFYEQLYGK 506
+ A+ L+DA SG+G+ DE I+E+ S +R Y+ +YG
Sbjct: 157 KSHHDELSRHIAKCDARRLYDAKNSGMGSVDEAVILEMFSKRSIPQLRLAFCSYKHIYGH 216
Query: 507 SLESDLKGDTSGHFKEIVRVVV 572
LK + G F++ +RVVV
Sbjct: 217 DYTKALKKNGFGEFEQSLRVVV 238
>04_03_0920 + 20826876-20829293
Length = 805
Score = 31.1 bits (67), Expect = 0.88
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 363 LPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSG 542
LPH A+ + A SG + + CT +YG S ++++LY SD D +G
Sbjct: 366 LPH-NAENVQAATSGDECSQVCLSNCSCTAYSYGKDGCSIWHDELYNVKQLSDASSDRNG 424
>06_01_0820 + 6202348-6203313
Length = 321
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 506 EPGIGLKRRHVGTLQRDCACRCAWPIAMKTRASMKAPL 619
+ G G VG +R C +CAWP A +PL
Sbjct: 183 DAGAGYAYAWVGNAERQCPGQCAWPFAAPPYGPQGSPL 220
>12_01_0471 -
3672309-3672740,3673159-3673251,3673271-3673399,
3673400-3673448,3674291-3674378,3674477-3674573,
3675195-3675278,3675377-3675464,3676589-3676715,
3676774-3676848,3676934-3677042,3677125-3677448,
3677863-3678039
Length = 623
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +3
Query: 297 ISELKSELTGNLENVIVALMTPLPHFY---AKELHDAVSGIGTDEEAIIEILCTLSNYGI 467
IS+L S+ ++++ + PL H + AKE HD + G+G+ + + + L + G
Sbjct: 159 ISDLNSQDKDPIKSIHFSNSNPLCHAFDPEAKEGHDLIIGMGSGDVYSMSLRQQLQDSGR 218
Query: 468 RTISAFYEQLYGKSLESD 521
+ ++A Q Y K + D
Sbjct: 219 KPVAA---QHYNKGVRYD 233
>05_07_0015 + 27065104-27065428,27065539-27066257
Length = 347
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -2
Query: 620 LVEPSSMPWFSSRLAMHNDTHNLFEVSRRVAF*VRFQA 507
LV PW ++R+A+H H+L E+SRR F ++ +A
Sbjct: 175 LVNNPPYPWATNRVAVH---HSLVELSRRGIFTIKGEA 209
>09_04_0202 -
15544498-15545037,15546043-15546449,15546874-15546977,
15547580-15547788,15548092-15549428,15551680-15551941
Length = 952
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = +3
Query: 324 GNLENV-IVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQL- 497
GN V +++ P Y+ L V D + I C + YG R + YE
Sbjct: 116 GNRSQVPVISFTATSPSLYSASLPYFVRATLNDSAQVQSIACLIKTYGWREVVPIYEDTD 175
Query: 498 YGKSL 512
YG+ +
Sbjct: 176 YGRGI 180
>04_03_0923 + 20843477-20845044,20846081-20846996
Length = 827
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = +3
Query: 309 KSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFY 488
+++ TG + LPH A+ + A S + + CT +YG S ++
Sbjct: 348 RTDRTGLTDKFYPVQSIRLPHS-AENVKVATSADECSQACLSNCSCTAYSYGKSGCSVWH 406
Query: 489 EQLYGKSLESDLKGDTSG 542
++LY SD D +G
Sbjct: 407 DELYNVKQLSDSSSDGNG 424
>05_01_0267 + 2050854-2051682,2051864-2051921,2052518-2052608
Length = 325
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 527 RRHVGTLQRDCACRCAWPIAMKTRASMKAPLKPMLKHWPAAGEGQWGNPTKS 682
R+H L D ACR A P A++ + +AP+ P P + + P KS
Sbjct: 171 RKHARELL-DAACRAAEPEALEAKKKAEAPVAPAAAPPPPPPQPKKKAPPKS 221
>12_01_0461 +
3618414-3618782,3619664-3619794,3620177-3620294,
3620602-3620654,3620758-3620807,3620912-3621010,
3621511-3621620,3621773-3621900,3622071-3622161,
3622610-3622693,3622863-3623083,3623449-3623527,
3624134-3624283,3624326-3624470,3624604-3624983,
3625096-3625197
Length = 769
Score = 27.9 bits (59), Expect = 8.2
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = -2
Query: 545 VSRRVAF*VRFQALAVQLFVKCGYGTDTIVGKRAQDLDDGF--FVGSNS*DSI---VELL 381
+ RR+ VR L QL V G+ D ++GK + D+D G N + + ELL
Sbjct: 96 IFRRLLDVVRHFGLGTQLRVAGGWVRDKLLGKDSTDIDIALDNMTGQNFCEKVNEYSELL 155
Query: 380 SVE-VGQGSHQCDDD 339
E G G QC+ D
Sbjct: 156 GEEQKGIGVIQCNPD 170
>10_01_0167 +
1876793-1877402,1877423-1877642,1877760-1879534,
1880019-1880199,1881313-1881529
Length = 1000
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 387 LHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFY 488
L D +S T EE ++ LC LS+Y ++++ Y
Sbjct: 703 LSDKLSKCKTKEEMLLASLCKLSSYKLQSLHIIY 736
>03_05_0721 +
27134277-27134666,27135401-27135466,27137036-27137191,
27137286-27137453,27137544-27137711
Length = 315
Score = 27.9 bits (59), Expect = 8.2
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 9/64 (14%)
Frame = -2
Query: 221 VDDSLLIGAEALHSLAKGLGIR-GRVER-----LRGVHRGGALVRV---VLLSAHVEILL 69
VDDSL A+A+H L + LG + GR ++ + +H A+ R+ + L H+ I+
Sbjct: 140 VDDSLAQCAKAVHVLCRALGGKTGRSKKGWDIGVNCIHPTAAMARLFSPIKLPVHMPIIE 199
Query: 68 FNSD 57
F+ D
Sbjct: 200 FHQD 203
>02_05_1224 +
35045268-35045270,35045735-35045863,35046037-35046180,
35046306-35046451,35046583-35046739,35046838-35046896,
35046978-35047137,35047716-35047865,35047969-35048105,
35048186-35048332,35048428-35048540,35048880-35048971,
35049637-35049738,35050108-35050145,35050255-35050381,
35050462-35050632,35050721-35050852,35050929-35051038,
35051118-35051178,35051386-35051427,35051756-35051933,
35052043-35052248,35052843-35052962,35053138-35053182,
35053310-35053408,35053846-35054058,35054254-35054393,
35054469-35054583,35054684-35054722,35054816-35054899,
35054969-35055139,35055891-35056100,35056193-35056378,
35056473-35056601,35056679-35056749,35056834-35056933,
35057016-35057072,35057778-35057834,35057940-35058020,
35058256-35058338,35058448-35058562
Length = 1572
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 171 LRKAMKGFGTDEKAIIDVLCRRGIVQRLE 257
L+ A + F DEKA+ D LC+R IV R E
Sbjct: 354 LKTAAELFMCDEKALEDSLCKRIIVTRDE 382
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,736,612
Number of Sequences: 37544
Number of extensions: 464069
Number of successful extensions: 1525
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1521
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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