Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1927
         (473 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    26   0.18 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    26   0.18 
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   2.9  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              22   3.8  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 26.2 bits (55), Expect = 0.18
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 131 ITSAMSVCCFFFYHKNTP 78
           I + M+V C  F+H++TP
Sbjct: 527 IVATMAVACLLFHHRDTP 544


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 26.2 bits (55), Expect = 0.18
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 131 ITSAMSVCCFFFYHKNTP 78
           I + M+V C  F+H++TP
Sbjct: 617 IVATMAVACLLFHHRDTP 634


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +2

Query: 152 DVKKTIRRLRVFKFN*FYLCHSSSNRDKPERDKLG*LLN 268
           D  KT+R   V+     ++CH    R +   +K G L N
Sbjct: 35  DNNKTVREFNVYWNVPTFMCHKYGLRFEEVSEKYGILQN 73


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 1  VFFFFFCIKPFLAPRRSVINK 63
          +F F FC+   LA     INK
Sbjct: 5  IFIFAFCLVGILAVSEESINK 25


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,354
Number of Sequences: 438
Number of extensions: 2152
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)