Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1925
(577 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 270 6e-73
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 269 8e-73
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 269 8e-73
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 268 2e-72
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 267 4e-72
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 267 4e-72
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 263 7e-71
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 263 7e-71
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 263 7e-71
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 248 3e-66
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 198 2e-51
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 168 2e-42
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 138 2e-33
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 113 1e-25
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 106 1e-23
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 104 5e-23
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 77 1e-14
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 75 3e-14
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 66 2e-11
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.078
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.2
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.2
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 5.1
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 28 5.1
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 6.8
At3g05750.1 68416.m00646 expressed protein 27 6.8
At5g17960.1 68418.m02106 DC1 domain-containing protein contains ... 27 9.0
At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit, ... 27 9.0
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 9.0
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 270 bits (661), Expect = 6e-73
Identities = 122/132 (92%), Positives = 127/132 (96%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 317
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 318 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 497
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 498 MFETFNTPAMYV 533
MFETFNTPAMYV
Sbjct: 125 MFETFNTPAMYV 136
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 269 bits (660), Expect = 8e-73
Identities = 122/132 (92%), Positives = 126/132 (95%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 317
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 318 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 497
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 498 MFETFNTPAMYV 533
MFETFNTPAMYV
Sbjct: 125 MFETFNTPAMYV 136
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 269 bits (660), Expect = 8e-73
Identities = 122/132 (92%), Positives = 126/132 (95%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 317
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 318 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 497
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 498 MFETFNTPAMYV 533
MFETFNTPAMYV
Sbjct: 125 MFETFNTPAMYV 136
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 268 bits (656), Expect = 2e-72
Identities = 121/132 (91%), Positives = 126/132 (95%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 317
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 318 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 497
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 498 MFETFNTPAMYV 533
MFETFN PAMYV
Sbjct: 125 MFETFNVPAMYV 136
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 267 bits (654), Expect = 4e-72
Identities = 120/132 (90%), Positives = 125/132 (94%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 317
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 318 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 497
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 498 MFETFNTPAMYV 533
MFETFN PAMYV
Sbjct: 125 MFETFNAPAMYV 136
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 267 bits (654), Expect = 4e-72
Identities = 120/132 (90%), Positives = 125/132 (94%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 317
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 318 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 497
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 498 MFETFNTPAMYV 533
MFETFN PAMYV
Sbjct: 125 MFETFNAPAMYV 136
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 263 bits (644), Expect = 7e-71
Identities = 115/132 (87%), Positives = 126/132 (95%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 317
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 318 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 497
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 498 MFETFNTPAMYV 533
MFETFN+PAMYV
Sbjct: 125 MFETFNSPAMYV 136
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 263 bits (644), Expect = 7e-71
Identities = 115/132 (87%), Positives = 126/132 (95%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 317
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 318 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 497
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 498 MFETFNTPAMYV 533
MFETFN+PAMYV
Sbjct: 125 MFETFNSPAMYV 136
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 263 bits (644), Expect = 7e-71
Identities = 115/132 (87%), Positives = 126/132 (95%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 317
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 318 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 497
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 498 MFETFNTPAMYV 533
MFETFN+PAMYV
Sbjct: 125 MFETFNSPAMYV 136
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 248 bits (606), Expect = 3e-66
Identities = 106/133 (79%), Positives = 124/133 (93%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 317
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 318 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 497
GIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQI
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 498 MFETFNTPAMYVG 536
MFE+F P+MY+G
Sbjct: 126 MFESFAFPSMYIG 138
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 198 bits (483), Expect = 2e-51
Identities = 91/131 (69%), Positives = 104/131 (79%)
Frame = +3
Query: 153 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 332
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 333 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 512
K P+EHGIV NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQIMFE+F
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 513 NTPAMYVGHPS 545
+ PAMYV S
Sbjct: 119 DVPAMYVSMQS 129
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 168 bits (409), Expect = 2e-42
Identities = 71/92 (77%), Positives = 85/92 (92%)
Frame = +3
Query: 261 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 440
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 441 LLTEAPLNPKANREKMTQIMFETFNTPAMYVG 536
LLTEAPLNPKA+REKMTQIMFETF P+MY+G
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIG 92
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 138 bits (334), Expect = 2e-33
Identities = 60/129 (46%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Frame = +3
Query: 153 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 326
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 327 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 506
+ YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MFE
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFE 126
Query: 507 TFNTPAMYV 533
+N +++
Sbjct: 127 KYNFAGVFI 135
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 113 bits (271), Expect = 1e-25
Identities = 62/154 (40%), Positives = 90/154 (58%), Gaps = 22/154 (14%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 287
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 288 -----------YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 431
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 432 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYV 533
HP+LL E PLN + REK ++MFE + PA+++
Sbjct: 125 HPMLLAEPPLNTQQQREKAAELMFEKYKVPALFM 158
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 106 bits (254), Expect = 1e-23
Identities = 62/149 (41%), Positives = 84/149 (56%), Gaps = 21/149 (14%)
Frame = +3
Query: 150 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 275
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 276 QKDSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 446
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 447 TEAPLNPKANREKMTQIMFETFNTPAMYV 533
TE+PL P +RE +I+FETFN P +Y+
Sbjct: 125 TESPLTPPESREYTGEILFETFNVPGLYI 153
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 104 bits (249), Expect = 5e-23
Identities = 55/132 (41%), Positives = 79/132 (59%), Gaps = 16/132 (12%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 272
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 273 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 449
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 450 EAPLNPKANREK 485
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 76.6 bits (180), Expect = 1e-14
Identities = 40/130 (30%), Positives = 67/130 (51%)
Frame = +3
Query: 153 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 332
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 333 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 512
+ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE F
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Query: 513 NTPAMYVGHP 542
++Y+ HP
Sbjct: 122 GFSSLYIAHP 131
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 75.4 bits (177), Expect = 3e-14
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 6/134 (4%)
Frame = +3
Query: 153 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 332
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 333 -----KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQ 494
+ P + +V ++ ME I + F + +HP+L+TE NP +R KM +
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAE 137
Query: 495 IMFETFNTPAMYVG 536
++FET+ PA+ G
Sbjct: 138 LLFETYGVPAVAFG 151
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 65.7 bits (153), Expect = 2e-11
Identities = 49/137 (35%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Frame = +3
Query: 150 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 326
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 327 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMF 503
TL PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MF
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMF 112
Query: 504 ETFNTPAMYVGHPSPCS 554
ETFN Y + S
Sbjct: 113 ETFNVSGFYASEQAVLS 129
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.078
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 274 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 137
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 297 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 476
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 477 REK 485
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 297 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 476
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 477 REK 485
REK
Sbjct: 225 REK 227
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 385 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 296
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 377 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLSH 270
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 250 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 128
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At3g05750.1 68416.m00646 expressed protein
Length = 798
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 138 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR-HQGVMVGMGQKDSYVGDEAQSK 314
++V ++V+NG+ K GF A ++ S+ + + G +++ V + + K
Sbjct: 386 KKVNKVLVENGTTTKKPGFTATSAKKSTSSSLSRKKNLSRSKKPANGVQEAGVNSDKRIK 445
Query: 315 RG--ILTLKYPIEHGIVTNWDDMEK 383
+G ++ ++ G+ T DD +K
Sbjct: 446 KGEKVIKCNITVDGGLKTGDDDRKK 470
>At5g17960.1 68418.m02106 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 599
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 436 GCSSGATRSSL*-KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*ESF 278
GC G T++ L C+ +S+ + TIP + Y + PL LC T + +
Sbjct: 454 GCKRGLTKNRLQCSTLCE-YSICYECATIPSELHYKYDKHPLTLCYGEDTDDKY 506
>At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit,
putative similar to cellulose synthase-1 [gi:9622874]
and -2 [gi:9622876] from Zea mays
Length = 1081
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 446 H*GSPQPQGQQREDDPDHVRN 508
H GSP+ +G + EDD D + N
Sbjct: 91 HRGSPRVEGDEDEDDVDDIEN 111
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 363 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 512
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,179,938
Number of Sequences: 28952
Number of extensions: 331476
Number of successful extensions: 931
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1121903184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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