Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1923
(319 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 77 2e-16
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 77 2e-16
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 77 2e-16
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 77 2e-16
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 24 1.2
EF382662-1|ABN54495.1| 178|Anopheles gambiae CPF family cuticle... 24 1.6
EF519478-1|ABP73565.1| 165|Anopheles gambiae CTLMA2 protein. 22 4.8
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 21 8.4
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 76.6 bits (180), Expect = 2e-16
Identities = 34/38 (89%), Positives = 34/38 (89%)
Frame = +3
Query: 111 DNGSGMCKDGFAGDDAPRAVFPLIVGRPRHQGVMVRYG 224
DNGSGMCK GFAGDDAPRAVFP IVGRPRHQGVMV G
Sbjct: 12 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 49
Score = 57.2 bits (132), Expect = 1e-10
Identities = 37/81 (45%), Positives = 40/81 (49%)
Frame = +2
Query: 77 MCDEEVAGLVVRQWLRYVQGXXXXXXXXXXXVPLDRGKAPPSGRDGSLWDINDSYV*DEA 256
MCDEEVA LVV + P G+ G + DSYV DEA
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ-KDSYVGDEA 59
Query: 257 QSKICILTLKYPI*HGIFTNW 319
QSK ILTLKYPI HGI TNW
Sbjct: 60 QSKRGILTLKYPIEHGIVTNW 80
Score = 22.2 bits (45), Expect = 4.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 73 QDVRRRSCRVGSTTMAPVCARTVSQEMMLLAP 168
+D+ + G TTM P A + +E+ LAP
Sbjct: 292 KDLYANTVLSGGTTMYPGIADRMQKEITALAP 323
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 76.6 bits (180), Expect = 2e-16
Identities = 34/38 (89%), Positives = 34/38 (89%)
Frame = +3
Query: 111 DNGSGMCKDGFAGDDAPRAVFPLIVGRPRHQGVMVRYG 224
DNGSGMCK GFAGDDAPRAVFP IVGRPRHQGVMV G
Sbjct: 12 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 49
Score = 57.2 bits (132), Expect = 1e-10
Identities = 37/81 (45%), Positives = 40/81 (49%)
Frame = +2
Query: 77 MCDEEVAGLVVRQWLRYVQGXXXXXXXXXXXVPLDRGKAPPSGRDGSLWDINDSYV*DEA 256
MCDEEVA LVV + P G+ G + DSYV DEA
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ-KDSYVGDEA 59
Query: 257 QSKICILTLKYPI*HGIFTNW 319
QSK ILTLKYPI HGI TNW
Sbjct: 60 QSKRGILTLKYPIEHGIVTNW 80
Score = 22.2 bits (45), Expect = 4.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 73 QDVRRRSCRVGSTTMAPVCARTVSQEMMLLAP 168
+D+ + G TTM P A + +E+ LAP
Sbjct: 292 KDLYANTVLSGGTTMYPGIADRMQKEITALAP 323
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 76.6 bits (180), Expect = 2e-16
Identities = 34/38 (89%), Positives = 34/38 (89%)
Frame = +3
Query: 111 DNGSGMCKDGFAGDDAPRAVFPLIVGRPRHQGVMVRYG 224
DNGSGMCK GFAGDDAPRAVFP IVGRPRHQGVMV G
Sbjct: 12 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 49
Score = 57.2 bits (132), Expect = 1e-10
Identities = 37/81 (45%), Positives = 40/81 (49%)
Frame = +2
Query: 77 MCDEEVAGLVVRQWLRYVQGXXXXXXXXXXXVPLDRGKAPPSGRDGSLWDINDSYV*DEA 256
MCDEEVA LVV + P G+ G + DSYV DEA
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ-KDSYVGDEA 59
Query: 257 QSKICILTLKYPI*HGIFTNW 319
QSK ILTLKYPI HGI TNW
Sbjct: 60 QSKRGILTLKYPIEHGIVTNW 80
Score = 22.2 bits (45), Expect = 4.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 73 QDVRRRSCRVGSTTMAPVCARTVSQEMMLLAP 168
+D+ + G TTM P A + +E+ LAP
Sbjct: 292 KDLYANTVLSGGTTMYPGIADRMQKEITALAP 323
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 76.6 bits (180), Expect = 2e-16
Identities = 34/38 (89%), Positives = 34/38 (89%)
Frame = +3
Query: 111 DNGSGMCKDGFAGDDAPRAVFPLIVGRPRHQGVMVRYG 224
DNGSGMCK GFAGDDAPRAVFP IVGRPRHQGVMV G
Sbjct: 12 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG 49
Score = 51.2 bits (117), Expect = 9e-09
Identities = 32/81 (39%), Positives = 39/81 (48%)
Frame = +2
Query: 77 MCDEEVAGLVVRQWLRYVQGXXXXXXXXXXXVPLDRGKAPPSGRDGSLWDINDSYV*DEA 256
MCD++ LVV + P G+ G + + D+YV DEA
Sbjct: 1 MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGN-KDAYVGDEA 59
Query: 257 QSKICILTLKYPI*HGIFTNW 319
QSK ILTLKYPI HGI TNW
Sbjct: 60 QSKRGILTLKYPIEHGIITNW 80
Score = 23.0 bits (47), Expect = 2.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 73 QDVRRRSCRVGSTTMAPVCARTVSQEMMLLAP 168
+D+ S G TTM P A + +E+ LAP
Sbjct: 292 KDLYANSVLSGGTTMYPGIADRMQKEITSLAP 323
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 24.2 bits (50), Expect = 1.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 187 PTIKGNTARGASSPAKPSLHIPEPLSYYQPGNFFV 83
P+I +TA +SSPA S+ EP + N FV
Sbjct: 230 PSISWSTADPSSSPAYSSITHYEPTARSLANNTFV 264
>EF382662-1|ABN54495.1| 178|Anopheles gambiae CPF family cuticle
protein protein.
Length = 178
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -1
Query: 157 ASSPAKPSLHIPEPLSYYQPGNFFVAHLELV 65
A+ A P++H P Y P + AH +V
Sbjct: 106 AAHYAAPAVHYPAAAHYAAPAVHYAAHAPIV 136
>EF519478-1|ABP73565.1| 165|Anopheles gambiae CTLMA2 protein.
Length = 165
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -3
Query: 191 PSHDQGEHGARSIISCETV 135
P+H +GEHG + C V
Sbjct: 121 PNHARGEHGQQPAERCVAV 139
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 21.4 bits (43), Expect = 8.4
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 175 GNTARGASSPAKPSLHIPEPLSYY 104
G A +SP P +P+P S Y
Sbjct: 1256 GGFASPPASPLVPDTAVPDPHSLY 1279
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 356,118
Number of Sequences: 2352
Number of extensions: 8333
Number of successful extensions: 29
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 21181083
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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