Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1922
(573 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73971-1|CAA98249.2| 929|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF224743-1|AAF82248.1| 929|Caenorhabditis elegans leucine-rich ... 29 2.3
Z81568-10|CAB04600.1| 441|Caenorhabditis elegans Hypothetical p... 29 3.1
L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy c... 28 4.1
L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated p... 28 4.1
AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical... 28 4.1
AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical... 28 4.1
AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding p... 28 4.1
AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding p... 28 4.1
AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy... 28 4.1
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 28 5.4
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 28 5.4
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 28 5.4
Z81517-2|CAB04209.1| 973|Caenorhabditis elegans Hypothetical pr... 27 7.2
U39848-7|AAA80693.3| 230|Caenorhabditis elegans Hypothetical pr... 27 9.5
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z73971-1|CAA98249.2| 929|Caenorhabditis elegans Hypothetical
protein C50H2.1 protein.
Length = 929
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +1
Query: 322 LHNLVTDQQTNSDLKPMNSIGNSDVENNKHVETLDDGQLRAL--LDEAITYKCPKDRE 489
LHN T + SI +++N+ H+E +D L L L + KCP RE
Sbjct: 90 LHNTSISVITPNFFDKFPSIRELEIDNSAHLEHIDGSSLSVLSKLRKLSVVKCPNLRE 147
>AF224743-1|AAF82248.1| 929|Caenorhabditis elegans leucine-rich
repeat-containingG protein-coupled receptor protein.
Length = 929
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +1
Query: 322 LHNLVTDQQTNSDLKPMNSIGNSDVENNKHVETLDDGQLRAL--LDEAITYKCPKDRE 489
LHN T + SI +++N+ H+E +D L L L + KCP RE
Sbjct: 90 LHNTSISVITPNFFDKFPSIRELEIDNSAHLEHIDGSSLSVLSKLRKLSVVKCPNLRE 147
>Z81568-10|CAB04600.1| 441|Caenorhabditis elegans Hypothetical
protein K08E3.8 protein.
Length = 441
Score = 28.7 bits (61), Expect = 3.1
Identities = 22/78 (28%), Positives = 35/78 (44%)
Frame = +1
Query: 202 IRPVSSDYSSFKMAPSPEYDKEPKAPDKSATCVSSDDTKVLHNLVTDQQTNSDLKPMNSI 381
++P S S +A + + KEP P++ + D ++ NLV NS L MN
Sbjct: 263 VQPPPSAASGSTVAGA-QSSKEPLKPNEEQIRMVQDPVDLVRNLVQKDLRNS-LVEMNKR 320
Query: 382 GNSDVENNKHVETLDDGQ 435
G V + E +DG+
Sbjct: 321 GAELVRQKQEGEVNEDGK 338
>L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy
chain protein.
Length = 815
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +1
Query: 217 SDYSSFK-MAPSPEYDKEPKAPDKSATCVSSDDTKVLHNLVTDQQTNSDLKPMNSIGNSD 393
S+YS+ K + + E+D E K A S D + L+ Q ++KP+ N +
Sbjct: 602 SEYSAAKESSTAAEHDAEAKLAADVARVESGQDAGRMKQLLVKDQAAKEIKPLTDRVNME 661
Query: 394 VENNKHVE 417
+ K+++
Sbjct: 662 LTTLKNLK 669
>L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated
protein 116 protein.
Length = 815
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +1
Query: 217 SDYSSFK-MAPSPEYDKEPKAPDKSATCVSSDDTKVLHNLVTDQQTNSDLKPMNSIGNSD 393
S+YS+ K + + E+D E K A S D + L+ Q ++KP+ N +
Sbjct: 602 SEYSAAKESSTAAEHDAEAKLAADVARVESGQDAGRMKQLLVKDQAAKEIKPLTDRVNME 661
Query: 394 VENNKHVE 417
+ K+++
Sbjct: 662 LTTLKNLK 669
>AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical
protein Y75B8A.35b protein.
Length = 463
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/88 (27%), Positives = 37/88 (42%)
Frame = +1
Query: 208 PVSSDYSSFKMAPSPEYDKEPKAPDKSATCVSSDDTKVLHNLVTDQQTNSDLKPMNSIGN 387
P D + ++ P+ + D E A DK+ KVL L + Q L +N+
Sbjct: 48 PAEEDLAPMEILPNNQGDVEMTAVDKNPD-------KVLFELRVETQIEPTLNYINAENE 100
Query: 388 SDVENNKHVETLDDGQLRALLDEAITYK 471
+ + K D+ Q A DEA TY+
Sbjct: 101 AVEWDIKSYYDFDNPQRPAQADEAATYQ 128
>AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical
protein Y75B8A.35a protein.
Length = 480
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/88 (27%), Positives = 37/88 (42%)
Frame = +1
Query: 208 PVSSDYSSFKMAPSPEYDKEPKAPDKSATCVSSDDTKVLHNLVTDQQTNSDLKPMNSIGN 387
P D + ++ P+ + D E A DK+ KVL L + Q L +N+
Sbjct: 65 PAEEDLAPMEILPNNQGDVEMTAVDKNPD-------KVLFELRVETQIEPTLNYINAENE 117
Query: 388 SDVENNKHVETLDDGQLRALLDEAITYK 471
+ + K D+ Q A DEA TY+
Sbjct: 118 AVEWDIKSYYDFDNPQRPAQADEAATYQ 145
>AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 465
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/88 (27%), Positives = 37/88 (42%)
Frame = +1
Query: 208 PVSSDYSSFKMAPSPEYDKEPKAPDKSATCVSSDDTKVLHNLVTDQQTNSDLKPMNSIGN 387
P D + ++ P+ + D E A DK+ KVL L + Q L +N+
Sbjct: 65 PAEEDLAPMEILPNNQGDVEMTAVDKNPD-------KVLFELRVETQIEPTLNYINAENE 117
Query: 388 SDVENNKHVETLDDGQLRALLDEAITYK 471
+ + K D+ Q A DEA TY+
Sbjct: 118 AVEWDIKSYYDFDNPQRPAQADEAATYQ 145
>AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 463
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/88 (27%), Positives = 37/88 (42%)
Frame = +1
Query: 208 PVSSDYSSFKMAPSPEYDKEPKAPDKSATCVSSDDTKVLHNLVTDQQTNSDLKPMNSIGN 387
P D + ++ P+ + D E A DK+ KVL L + Q L +N+
Sbjct: 48 PAEEDLAPMEILPNNQGDVEMTAVDKNPD-------KVLFELRVETQIEPTLNYINAENE 100
Query: 388 SDVENNKHVETLDDGQLRALLDEAITYK 471
+ + K D+ Q A DEA TY+
Sbjct: 101 AVEWDIKSYYDFDNPQRPAQADEAATYQ 128
>AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy
chain protein.
Length = 815
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +1
Query: 217 SDYSSFK-MAPSPEYDKEPKAPDKSATCVSSDDTKVLHNLVTDQQTNSDLKPMNSIGNSD 393
S+YS+ K + + E+D E K A S D + L+ Q ++KP+ N +
Sbjct: 602 SEYSAAKESSTAAEHDAEAKLAADVARVESGQDAGRMKQLLVKDQAAKEIKPLTDRVNME 661
Query: 394 VENNKHVE 417
+ K+++
Sbjct: 662 LTTLKNLK 669
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 301 SSDDTKVLHNLVTDQQTNSDLKPMNSIGN-SDVENNKHVETLDDGQLRALLDEAITYKCP 477
S ++ K LH L+ + D P+ +GN +D+EN +HV + +L L
Sbjct: 103 SFEEVKKLHELICRIKDRDDF-PIILVGNKADLENERHVARHEAEELAHRLSIPYLECSA 161
Query: 478 KDREGKSSLFKELLEEVEQDQ 540
K R+ F +++ V + Q
Sbjct: 162 KIRKNVDEAFFDIVRLVRKYQ 182
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 301 SSDDTKVLHNLVTDQQTNSDLKPMNSIGN-SDVENNKHVETLDDGQLRALLDEAITYKCP 477
S ++ K LH L+ + D P+ +GN +D+EN +HV + +L L
Sbjct: 103 SFEEVKKLHELICRIKDRDDF-PIILVGNKADLENERHVARHEAEELAHRLSIPYLECSA 161
Query: 478 KDREGKSSLFKELLEEVEQDQ 540
K R+ F +++ V + Q
Sbjct: 162 KIRKNVDEAFFDIVRLVRKYQ 182
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 301 SSDDTKVLHNLVTDQQTNSDLKPMNSIGN-SDVENNKHVETLDDGQLRALLDEAITYKCP 477
S ++ K LH L+ + D P+ +GN +D+EN +HV + +L L
Sbjct: 103 SFEEVKKLHELICRIKDRDDF-PIILVGNKADLENERHVARHEAEELAHRLSIPYLECSA 161
Query: 478 KDREGKSSLFKELLEEVEQDQ 540
K R+ F +++ V + Q
Sbjct: 162 KIRKNVDEAFFDIVRLVRKYQ 182
>Z81517-2|CAB04209.1| 973|Caenorhabditis elegans Hypothetical
protein F28B1.2 protein.
Length = 973
Score = 27.5 bits (58), Expect = 7.2
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Frame = +1
Query: 259 DKEPKAPDK----SATCVSSDDTKVLHNLVTDQQTNSDLKPMNSIGNSDVENNKHVETLD 426
D+ P A D+ +ATC D T LH+ + + + S+ D+ K ET D
Sbjct: 140 DRMPSATDQCGFFNATCSEDDYTPFLHSSTSSFIFSQGTRHFKSVSYEDLLCVKEKETFD 199
Query: 427 --DGQLRALLDEAITYKCPKDRE 489
G L+ L D +IT K D +
Sbjct: 200 WYFGNLK-LGDASITCKPHTDNK 221
>U39848-7|AAA80693.3| 230|Caenorhabditis elegans Hypothetical
protein B0286.1 protein.
Length = 230
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 412 VETLDDGQLRALLDEAITYKCPKDREGKSSLFKELLEEVEQD 537
V+TL++ +++ L + K P+DR+ K E + EQD
Sbjct: 185 VQTLEEAKVKKLEEREQMDKHPQDRDNKDKEVNEQPDNEEQD 226
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 301 SSDDTKVLHNLVTDQQTNSDLKPMNSIGN-SDVENNKHV 414
S ++ K LH L+ + D P+ +GN +D+EN +HV
Sbjct: 103 SFEEVKKLHELICRIKDRDDF-PIILVGNKADLENERHV 140
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,795,064
Number of Sequences: 27780
Number of extensions: 252303
Number of successful extensions: 738
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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