Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1921
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   4.5  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    22   5.9  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    21   7.8  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   7.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.8  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   7.8  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 333  LRVAPEEHPVLLTEAPLNPKANREKM 410
            LR+ P  H V+ T   +NP  + EK+
Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL 1486


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +2

Query: 524 RCLPHRAHLRGDTHFPTPSCVWTWAGRDPSQDYLMKI 634
           RC P        T   T     T+ G  PS DY +++
Sbjct: 459 RCYPRYDDATNATVIQTSELSATFKGLKPSTDYAIQV 495


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/22 (31%), Positives = 10/22 (45%)
 Frame = +2

Query: 545 HLRGDTHFPTPSCVWTWAGRDP 610
           H++   H P P C+    G  P
Sbjct: 324 HIKSPYHTPEPDCIHELLGHMP 345


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 536 VGDTVAGVQHDTGGTTGRVQREHGLDGDVHG 444
           VGD +A ++ D  G    +  E+G  G   G
Sbjct: 42  VGDDIAWMKFDKEGRLRAINPEYGFFGVAPG 72


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +2

Query: 533 PHRAHLRGDTHFPTPSCVWTWAGRDPSQD 619
           P R H+  D   P    V+ W+  D + D
Sbjct: 140 PGRGHIEDDYVGPAMELVYAWSTIDYTYD 168


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 610  RVTTGPSPNAGWRGEV 563
            +VT  P P   W GE+
Sbjct: 994  KVTWKPPPREDWNGEI 1009


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 96  GMCKAGFAGD 125
           GMCK G +GD
Sbjct: 130 GMCKEGISGD 139


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,284
Number of Sequences: 438
Number of extensions: 5094
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)