Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1916
         (631 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82078-7|CAB04947.3|  801|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z81142-10|CAB03503.2|  384|Caenorhabditis elegans Hypothetical p...    29   2.1  
AF497514-1|AAM33381.1|  801|Caenorhabditis elegans heavy metal t...    29   2.1  
AF497513-1|AAM33380.1|  801|Caenorhabditis elegans heavy metal t...    29   2.1  
AF490977-1|AAQ06435.1|  801|Caenorhabditis elegans ABC6 protein ...    29   2.1  

>Z82078-7|CAB04947.3|  801|Caenorhabditis elegans Hypothetical
           protein W09D6.6 protein.
          Length = 801

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 496 IFAYILVNIFLFAY*VY*YKYKHSLLTHFFGNVFFLI 606
           IFA I  +IF F +  Y + Y H LL      +FF I
Sbjct: 79  IFAVICQSIFYFCFTFYFHPYTHLLLAFCVSKLFFWI 115


>Z81142-10|CAB03503.2|  384|Caenorhabditis elegans Hypothetical
           protein ZK1037.4 protein.
          Length = 384

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
 Frame = -1

Query: 376 TKDLGEFYHDSSRNGLLDFERLTIFTHRDLWS--LVIQQPNNWLLAVEWKVITRSECLST 203
           T D    Y    R+  ++ ER ++  H DLW+  ++  + +N    V+W+   R   +  
Sbjct: 218 TLDTDPNYLQKMRDEYINEERPSVICHGDLWAPQILWDKEDNIAGIVDWQATHRGSPMED 277

Query: 202 VCPI*EWIKKLTMMAAFEKALVVRFINKFE 113
           +  I      +     F K L+  + NK +
Sbjct: 278 LHHILSTCTSVQNRKTFTKPLLDHYYNKLK 307


>AF497514-1|AAM33381.1|  801|Caenorhabditis elegans heavy metal
           tolerance factor 1 protein.
          Length = 801

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 496 IFAYILVNIFLFAY*VY*YKYKHSLLTHFFGNVFFLI 606
           IFA I  +IF F +  Y + Y H LL      +FF I
Sbjct: 79  IFAVICQSIFYFCFTFYFHPYTHLLLAFCVSKLFFWI 115


>AF497513-1|AAM33380.1|  801|Caenorhabditis elegans heavy metal
           tolerance factor 1 protein.
          Length = 801

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 496 IFAYILVNIFLFAY*VY*YKYKHSLLTHFFGNVFFLI 606
           IFA I  +IF F +  Y + Y H LL      +FF I
Sbjct: 79  IFAVICQSIFYFCFTFYFHPYTHLLLAFCVSKLFFWI 115


>AF490977-1|AAQ06435.1|  801|Caenorhabditis elegans ABC6 protein
           protein.
          Length = 801

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 496 IFAYILVNIFLFAY*VY*YKYKHSLLTHFFGNVFFLI 606
           IFA I  +IF F +  Y + Y H LL      +FF I
Sbjct: 79  IFAVICQSIFYFCFTFYFHPYTHLLLAFCVSKLFFWI 115


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,225,698
Number of Sequences: 27780
Number of extensions: 247568
Number of successful extensions: 446
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)