SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1914
         (498 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF182154-1|AAD56033.1|  395|Drosophila melanogaster dsRBD-contai...    33   0.16 
BT021433-1|AAX33581.1|  378|Drosophila melanogaster GH20159p pro...    33   0.21 
AY217028-1|AAO37650.1|  278|Drosophila melanogaster DIP1-d splic...    33   0.21 
AY121664-1|AAM51991.1|  378|Drosophila melanogaster RE10847p pro...    33   0.21 
AF218310-1|AAF67101.1|  410|Drosophila melanogaster Ultrabithora...    33   0.21 
AF213338-1|AAF25886.1|  374|Drosophila melanogaster disco intera...    33   0.21 
AF182444-3|AAF03831.1|  309|Drosophila melanogaster disco-intera...    33   0.21 
AF182444-2|AAF03832.1|  395|Drosophila melanogaster disco-intera...    33   0.21 
AF182444-1|AAF03833.1|  410|Drosophila melanogaster disco-intera...    33   0.21 
AF175713-1|AAD50503.1|  309|Drosophila melanogaster dsRBD-contai...    33   0.21 
AF175712-3|AAD50504.1|  309|Drosophila melanogaster dsRBD-contai...    33   0.21 
AF175712-2|AAD50506.1|  395|Drosophila melanogaster dsRBD-contai...    33   0.21 
AF175712-1|AAD50505.1|  410|Drosophila melanogaster dsRBD-contai...    33   0.21 
AF175711-1|AAD50502.1|  410|Drosophila melanogaster dsRBD-contai...    33   0.21 
AE014298-3169|AAN09008.1|  409|Drosophila melanogaster CG17686-P...    33   0.21 
AE014298-3168|AAF45390.2|  409|Drosophila melanogaster CG17686-P...    33   0.21 
AE014298-3167|AAN09007.1|  410|Drosophila melanogaster CG17686-P...    33   0.21 
AE014298-3166|AAN09006.1|  395|Drosophila melanogaster CG17686-P...    33   0.21 
AJ250870-4|CAC17711.1|  409|Drosophila melanogaster chromatin co...    32   0.50 
AJ250870-3|CAC17710.1|  394|Drosophila melanogaster chromatin co...    32   0.50 
AJ250870-2|CAC17709.1|  395|Drosophila melanogaster chromatin co...    32   0.50 
AJ250870-1|CAC17708.1|  410|Drosophila melanogaster chromatin co...    32   0.50 
AJ250869-1|CAC17707.1|  395|Drosophila melanogaster chromatin co...    32   0.50 
AJ250868-1|CAC17706.1|  410|Drosophila melanogaster chromatin co...    32   0.50 
AJ250867-1|CAC17705.1|  394|Drosophila melanogaster chromatin co...    32   0.50 
AJ250866-1|CAC17704.1|  409|Drosophila melanogaster chromatin co...    32   0.50 
AE014297-2719|AAF55707.2| 1362|Drosophila melanogaster CG4562-PA...    31   0.87 
AE013599-3412|AAF46861.2| 1301|Drosophila melanogaster CG4294-PA...    30   1.5  
AE014297-1321|AAF54656.1| 1307|Drosophila melanogaster CG14709-P...    29   3.5  
AY075291-1|AAL68158.2| 1193|Drosophila melanogaster AT30755p pro...    28   6.1  
AE014297-3139|AAN14374.2| 1304|Drosophila melanogaster CG31169-P...    28   6.1  
AE014297-3138|AAF55983.2| 1469|Drosophila melanogaster CG31169-P...    28   6.1  
AE014296-2182|AAF49887.2| 3892|Drosophila melanogaster CG32113-P...    28   6.1  
AY069804-1|AAL39949.1| 2555|Drosophila melanogaster SD04476p pro...    28   8.1  
AF032870-1|AAC38820.1| 2559|Drosophila melanogaster Shar pei/DRh...    28   8.1  
AF031930-1|AAB88816.1| 2559|Drosophila melanogaster putative gua...    28   8.1  
AE013599-2404|AAF57915.2| 2205|Drosophila melanogaster CG9635-PE...    28   8.1  
AE013599-2403|AAM68490.2| 2559|Drosophila melanogaster CG9635-PF...    28   8.1  
AE013599-2402|AAM68489.1| 2559|Drosophila melanogaster CG9635-PD...    28   8.1  

>AF182154-1|AAD56033.1|  395|Drosophila melanogaster
           dsRBD-containing protein dip1-b splice isoform protein.
          Length = 395

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
 Frame = +1

Query: 157 NLEMDSAVSDEPRDVAEDAACVGQNNAPFEFDTNGMEGIEEKKLAGSKEELPSWMKSKLP 336
           N + D+  S  P  V      +  N+ P   D            +GS  ++P   K    
Sbjct: 75  NPDADAIASKLPMPVIIKEEPISVNDEP-SVDNIEDNTSASTSASGSGGKIP--FKKIFQ 131

Query: 337 GVKKVTNKERRRK--QNQHLRRLLTPKNAVMVINEM 438
             KK + + R +K  QN+ LR+ + PKNA+M +NE+
Sbjct: 132 KRKKSSERTRDKKLRQNRQLRKSMLPKNALMALNEV 167


>BT021433-1|AAX33581.1|  378|Drosophila melanogaster GH20159p
           protein.
          Length = 378

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 11/27 (40%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ LR+ + PKNA+M +NE+
Sbjct: 124 RDKKLRQNRQLRKSMLPKNALMALNEV 150


>AY217028-1|AAO37650.1|  278|Drosophila melanogaster DIP1-d splice
           isoform protein.
          Length = 278

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 11/27 (40%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ LR+ + PKNA+M +NE+
Sbjct: 24  RDKKLRQNRQLRKSMLPKNALMALNEV 50


>AY121664-1|AAM51991.1|  378|Drosophila melanogaster RE10847p
           protein.
          Length = 378

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 11/27 (40%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ LR+ + PKNA+M +NE+
Sbjct: 124 RDKKLRQNRQLRKSMLPKNALMALNEV 150


>AF218310-1|AAF67101.1|  410|Drosophila melanogaster Ultrabithorax
           binding protein 1 protein.
          Length = 410

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 11/27 (40%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ LR+ + PKNA+M +NE+
Sbjct: 156 RDKKLRQNRQLRKSMLPKNALMALNEV 182


>AF213338-1|AAF25886.1|  374|Drosophila melanogaster disco
           interacting protein isoformTO67 protein.
          Length = 374

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 11/27 (40%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ LR+ + PKNA+M +NE+
Sbjct: 124 RDKKLRQNRQLRKSMLPKNALMALNEV 150


>AF182444-3|AAF03831.1|  309|Drosophila melanogaster
           disco-interacting protein protein.
          Length = 309

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 11/27 (40%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ LR+ + PKNA+M +NE+
Sbjct: 55  RDKKLRQNRQLRKSMLPKNALMALNEV 81


>AF182444-2|AAF03832.1|  395|Drosophila melanogaster
           disco-interacting protein protein.
          Length = 395

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 11/27 (40%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ LR+ + PKNA+M +NE+
Sbjct: 141 RDKKLRQNRQLRKSMLPKNALMALNEV 167


>AF182444-1|AAF03833.1|  410|Drosophila melanogaster
           disco-interacting protein protein.
          Length = 410

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 11/27 (40%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ LR+ + PKNA+M +NE+
Sbjct: 156 RDKKLRQNRQLRKSMLPKNALMALNEV 182


>AF175713-1|AAD50503.1|  309|Drosophila melanogaster
           dsRBD-containing protein dip1-a splice isoform protein.
          Length = 309

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 11/27 (40%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ LR+ + PKNA+M +NE+
Sbjct: 55  RDKKLRQNRQLRKSMLPKNALMALNEV 81


>AF175712-3|AAD50504.1|  309|Drosophila melanogaster
           dsRBD-containing protein dip1-a protein.
          Length = 309

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 11/27 (40%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ LR+ + PKNA+M +NE+
Sbjct: 55  RDKKLRQNRQLRKSMLPKNALMALNEV 81


>AF175712-2|AAD50506.1|  395|Drosophila melanogaster
           dsRBD-containing protein dip1-b protein.
          Length = 395

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 11/27 (40%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ LR+ + PKNA+M +NE+
Sbjct: 141 RDKKLRQNRQLRKSMLPKNALMALNEV 167


>AF175712-1|AAD50505.1|  410|Drosophila melanogaster
           dsRBD-containing protein dip1-c protein.
          Length = 410

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 11/27 (40%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ LR+ + PKNA+M +NE+
Sbjct: 156 RDKKLRQNRQLRKSMLPKNALMALNEV 182


>AF175711-1|AAD50502.1|  410|Drosophila melanogaster
           dsRBD-containing protein dip1-c splice isoform protein.
          Length = 410

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 11/27 (40%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ LR+ + PKNA+M +NE+
Sbjct: 156 RDKKLRQNRQLRKSMLPKNALMALNEV 182


>AE014298-3169|AAN09008.1|  409|Drosophila melanogaster CG17686-PB,
           isoform B protein.
          Length = 409

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 11/27 (40%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ LR+ + PKNA+M +NE+
Sbjct: 155 RDKKLRQNRQLRKSMLPKNALMALNEV 181


>AE014298-3168|AAF45390.2|  409|Drosophila melanogaster CG17686-PA,
           isoform A protein.
          Length = 409

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 11/27 (40%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ LR+ + PKNA+M +NE+
Sbjct: 155 RDKKLRQNRQLRKSMLPKNALMALNEV 181


>AE014298-3167|AAN09007.1|  410|Drosophila melanogaster CG17686-PD,
           isoform D protein.
          Length = 410

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 11/27 (40%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ LR+ + PKNA+M +NE+
Sbjct: 156 RDKKLRQNRQLRKSMLPKNALMALNEV 182


>AE014298-3166|AAN09006.1|  395|Drosophila melanogaster CG17686-PC,
           isoform C protein.
          Length = 395

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 11/27 (40%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ LR+ + PKNA+M +NE+
Sbjct: 141 RDKKLRQNRQLRKSMLPKNALMALNEV 167


>AJ250870-4|CAC17711.1|  409|Drosophila melanogaster chromatin
           component KLETT protein.
          Length = 409

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ +R+ + PKNA+M +NE+
Sbjct: 155 RDKKLRQNRQVRKSMLPKNALMALNEV 181


>AJ250870-3|CAC17710.1|  394|Drosophila melanogaster chromatin
           component KLETT protein.
          Length = 394

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ +R+ + PKNA+M +NE+
Sbjct: 140 RDKKLRQNRQVRKSMLPKNALMALNEV 166


>AJ250870-2|CAC17709.1|  395|Drosophila melanogaster chromatin
           component KLETT protein.
          Length = 395

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ +R+ + PKNA+M +NE+
Sbjct: 141 RDKKLRQNRQVRKSMLPKNALMALNEV 167


>AJ250870-1|CAC17708.1|  410|Drosophila melanogaster chromatin
           component KLETT protein.
          Length = 410

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ +R+ + PKNA+M +NE+
Sbjct: 156 RDKKLRQNRQVRKSMLPKNALMALNEV 182


>AJ250869-1|CAC17707.1|  395|Drosophila melanogaster chromatin
           component KLETT protein.
          Length = 395

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ +R+ + PKNA+M +NE+
Sbjct: 141 RDKKLRQNRQVRKSMLPKNALMALNEV 167


>AJ250868-1|CAC17706.1|  410|Drosophila melanogaster chromatin
           component KLETT protein.
          Length = 410

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ +R+ + PKNA+M +NE+
Sbjct: 156 RDKKLRQNRQVRKSMLPKNALMALNEV 182


>AJ250867-1|CAC17705.1|  394|Drosophila melanogaster chromatin
           component KLETT protein.
          Length = 394

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ +R+ + PKNA+M +NE+
Sbjct: 140 RDKKLRQNRQVRKSMLPKNALMALNEV 166


>AJ250866-1|CAC17704.1|  409|Drosophila melanogaster chromatin
           component KLETT protein.
          Length = 409

 Score = 31.9 bits (69), Expect = 0.50
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +1

Query: 358 KERRRKQNQHLRRLLTPKNAVMVINEM 438
           ++++ +QN+ +R+ + PKNA+M +NE+
Sbjct: 155 RDKKLRQNRQVRKSMLPKNALMALNEV 181


>AE014297-2719|AAF55707.2| 1362|Drosophila melanogaster CG4562-PA
            protein.
          Length = 1362

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
 Frame = +1

Query: 139  RAANHFNL-EMDSAVSDEPRDVAEDAACVGQNNAPFE--FDTNGMEGIEEKKLAGSKEEL 309
            R  N   L ++ S +S  P++    +  +  N  PF+   D    E +EE KL     +L
Sbjct: 1140 RDTNDLGLHDLRSKISIIPQEPVLFSGTMRYNLDPFDEYSDAKLWESLEEVKLKQVVADL 1199

Query: 310  PSWMKSKLPGVKKVTNKERRRKQNQHLRRLLTPKNAVMVINE 435
            PS ++SK+   +  TN    ++Q   L R +  +N ++V++E
Sbjct: 1200 PSGLQSKIS--EGGTNFSVGQRQLVCLARAILRENRILVMDE 1239


>AE013599-3412|AAF46861.2| 1301|Drosophila melanogaster CG4294-PA
           protein.
          Length = 1301

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 342 EESDKQGTSPQTEPAPKATPHA 407
           EE  K  TSP+T+P PK TP A
Sbjct: 868 EEPPKSVTSPKTQPPPKTTPVA 889


>AE014297-1321|AAF54656.1| 1307|Drosophila melanogaster CG14709-PA
            protein.
          Length = 1307

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
 Frame = +1

Query: 163  EMDSAVSDEPRDVAEDAACVGQNNAPFEF--DTNGMEGIEEKKLAGSKEELPSWMKSKLP 336
            ++ S +S  P++    +  +  N  PFE   D    + +EE KL     ELP+ ++SK+ 
Sbjct: 1117 DLRSKISIIPQEPVLFSGSMRYNLDPFEEYNDAKLWDALEEVKLKPLISELPNGLQSKIS 1176

Query: 337  GVKKVTNKERRRKQNQHLRRLLTPKNAVMVINE 435
              +  +N    ++Q   L R +  +N V+V++E
Sbjct: 1177 --EGGSNFSVGQRQLVCLARAILRENRVLVMDE 1207


>AY075291-1|AAL68158.2| 1193|Drosophila melanogaster AT30755p protein.
          Length = 1193

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 2/109 (1%)
 Frame = +1

Query: 157  NLEMDSAVSDEPRDVAEDAACVGQNNAPFEFDTNGMEGIEEK--KLAGSKEELPSWMKSK 330
            N  ++    DE  D+ E A+       P     +  E + E   K     E   S    K
Sbjct: 912  NAPVEFGNKDEAMDLNESAS---DQEVPKRKKISKTEAVIEPVAKDVSMAEPNESLHSKK 968

Query: 331  LPGVKKVTNKERRRKQNQHLRRLLTPKNAVMVINEMIPREQIANNFKVE 477
                  ++ +E +RKQ + LRR  +  ++    NE   + QI  N K +
Sbjct: 969  ETSPASLSKQESKRKQKRSLRRPSSDSDSTKTTNEFEKQRQIIENQKAQ 1017


>AE014297-3139|AAN14374.2| 1304|Drosophila melanogaster CG31169-PB,
            isoform B protein.
          Length = 1304

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 2/109 (1%)
 Frame = +1

Query: 157  NLEMDSAVSDEPRDVAEDAACVGQNNAPFEFDTNGMEGIEEK--KLAGSKEELPSWMKSK 330
            N  ++    DE  D+ E A+       P     +  E + E   K     E   S    K
Sbjct: 1023 NAPVEFGNKDEAMDLNESAS---DQEVPKRKKISKTEAVIEPVAKDVSMAEPNESLHSKK 1079

Query: 331  LPGVKKVTNKERRRKQNQHLRRLLTPKNAVMVINEMIPREQIANNFKVE 477
                  ++ +E +RKQ + LRR  +  ++    NE   + QI  N K +
Sbjct: 1080 ETSPASLSKQESKRKQKRSLRRPSSDSDSTKTTNEFEKQRQIIENQKAQ 1128


>AE014297-3138|AAF55983.2| 1469|Drosophila melanogaster CG31169-PA,
            isoform A protein.
          Length = 1469

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 2/109 (1%)
 Frame = +1

Query: 157  NLEMDSAVSDEPRDVAEDAACVGQNNAPFEFDTNGMEGIEEK--KLAGSKEELPSWMKSK 330
            N  ++    DE  D+ E A+       P     +  E + E   K     E   S    K
Sbjct: 1188 NAPVEFGNKDEAMDLNESAS---DQEVPKRKKISKTEAVIEPVAKDVSMAEPNESLHSKK 1244

Query: 331  LPGVKKVTNKERRRKQNQHLRRLLTPKNAVMVINEMIPREQIANNFKVE 477
                  ++ +E +RKQ + LRR  +  ++    NE   + QI  N K +
Sbjct: 1245 ETSPASLSKQESKRKQKRSLRRPSSDSDSTKTTNEFEKQRQIIENQKAQ 1293


>AE014296-2182|AAF49887.2| 3892|Drosophila melanogaster CG32113-PA
            protein.
          Length = 3892

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = +1

Query: 19   CFKKYLHRS--SGNCRYTNIDTCILLKKNHTYLVMAFLQHKGRAANHFNLEMDSAV 180
            CF  ++      G+ +YT+ +   L KK  +  ++ +  H GR+A +  LE  S++
Sbjct: 1538 CFYNHMQVKVFGGDQKYTSSNKNELGKKKESQTLVIYKSHTGRSAQNGKLEQTSSI 1593


>AY069804-1|AAL39949.1| 2555|Drosophila melanogaster SD04476p protein.
          Length = 2555

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +1

Query: 358  KERRRKQNQHLRRLLT 405
            +ER RK+NQHLR LL+
Sbjct: 2466 RERLRKENQHLRELLS 2481


>AF032870-1|AAC38820.1| 2559|Drosophila melanogaster Shar pei/DRhoGEF2
            protein.
          Length = 2559

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +1

Query: 358  KERRRKQNQHLRRLLT 405
            +ER RK+NQHLR LL+
Sbjct: 2470 RERLRKENQHLRELLS 2485


>AF031930-1|AAB88816.1| 2559|Drosophila melanogaster putative guanine
            nucleotide exchangefactor RhoGEF2 protein.
          Length = 2559

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +1

Query: 358  KERRRKQNQHLRRLLT 405
            +ER RK+NQHLR LL+
Sbjct: 2470 RERLRKENQHLRELLS 2485


>AE013599-2404|AAF57915.2| 2205|Drosophila melanogaster CG9635-PE,
            isoform E protein.
          Length = 2205

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +1

Query: 358  KERRRKQNQHLRRLLT 405
            +ER RK+NQHLR LL+
Sbjct: 2116 RERLRKENQHLRELLS 2131


>AE013599-2403|AAM68490.2| 2559|Drosophila melanogaster CG9635-PF,
            isoform F protein.
          Length = 2559

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +1

Query: 358  KERRRKQNQHLRRLLT 405
            +ER RK+NQHLR LL+
Sbjct: 2470 RERLRKENQHLRELLS 2485


>AE013599-2402|AAM68489.1| 2559|Drosophila melanogaster CG9635-PD,
            isoform D protein.
          Length = 2559

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +1

Query: 358  KERRRKQNQHLRRLLT 405
            +ER RK+NQHLR LL+
Sbjct: 2470 RERLRKENQHLRELLS 2485


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,534,781
Number of Sequences: 53049
Number of extensions: 541206
Number of successful extensions: 2390
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 2174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2390
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -