Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1914
(498 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016420-7|AAB65303.1| 428|Caenorhabditis elegans Serpentine re... 31 0.46
Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical pr... 31 0.61
U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical p... 31 0.61
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 30 1.1
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 30 1.1
U70852-15|AAK29824.1| 543|Caenorhabditis elegans Hypothetical p... 29 2.5
U39853-5|AAK39223.1| 231|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr... 27 5.7
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 27 5.7
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein. 27 5.7
U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical p... 27 7.6
U88314-1|AAF99885.1| 342|Caenorhabditis elegans Hypothetical pr... 27 10.0
U13875-8|AAN63443.1| 633|Caenorhabditis elegans Hypothetical pr... 27 10.0
U13875-7|AAN63444.1| 635|Caenorhabditis elegans Hypothetical pr... 27 10.0
AF022974-8|AAX22288.1| 289|Caenorhabditis elegans Serpentine re... 27 10.0
AF003134-6|AAB54146.3| 827|Caenorhabditis elegans Hypothetical ... 27 10.0
AC006662-3|AAF39895.1| 368|Caenorhabditis elegans Hypothetical ... 27 10.0
>AF016420-7|AAB65303.1| 428|Caenorhabditis elegans Serpentine
receptor, class r protein8 protein.
Length = 428
Score = 31.1 bits (67), Expect = 0.46
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = -1
Query: 300 LGASQFLFFDSLHTIRVKLKWCIVLSDAGCILGDITRLIRYCRIHFEVEMIGGP 139
LG +FL SL K K C V + C+LG + ++ RI F +E +G P
Sbjct: 61 LGPFRFLVKASLLDCSTKSKCCSVFT---CLLGVVMVVVTLIRISFLMEAVGAP 111
>Z37139-3|CAA85492.2| 793|Caenorhabditis elegans Hypothetical
protein C14B1.6 protein.
Length = 793
Score = 30.7 bits (66), Expect = 0.61
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +1
Query: 328 KLPGVKKVTNKERRRKQNQHLRRLLTPKNAVMVINEMIPREQIA 459
K PGVK +N +++R+QN L R T + + V ++P QIA
Sbjct: 515 KYPGVKD-SNYDQKRRQNFGLLRYYTLEELIEVFGLLLPDVQIA 557
>U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical
protein F45F2.1 protein.
Length = 475
Score = 30.7 bits (66), Expect = 0.61
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -2
Query: 482 LGSTLKLLAICSLGIISLITMTAFFGVRSRLRCWFCLRRRSLFVTF 345
LG T K I S+G I L ++ F +R W C+ R L++ F
Sbjct: 4 LGPTFK--TIFSIGAIVLWSIELFLAFAQSVRPWICILRTCLYIIF 47
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +3
Query: 321 EK*TTGSEESDKQGTSPQTEPAPKATP--HAEKCSHGDQRND 440
EK + S++S P +P PKATP A+K D +D
Sbjct: 458 EKAASSSDDSSDDEKKPTAKPTPKATPKQSAKKADSSDDSSD 499
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +3
Query: 321 EK*TTGSEESDKQGTSPQTEPAPKATP--HAEKCSHGDQRND 440
EK + S++S P +P PKATP A+K D +D
Sbjct: 733 EKAASSSDDSSDDEKKPTAKPTPKATPKQSAKKADSSDDSSD 774
>U70852-15|AAK29824.1| 543|Caenorhabditis elegans Hypothetical
protein F45E4.11 protein.
Length = 543
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 458 AICSLGIISLITMTAFFGVRSRLRCWFCLRRRSLFVTFFTPG 333
A+ S G+ I+ FF S FCL +F TPG
Sbjct: 383 AVASAGLAICISFVPFFNKESAFLAVFCLCGAMIFAGLHTPG 424
>U39853-5|AAK39223.1| 231|Caenorhabditis elegans Hypothetical
protein F13B9.2 protein.
Length = 231
Score = 27.9 bits (59), Expect = 4.3
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 307 LPSWMKSKLPGVKKVTNKERRRKQNQHLRRL 399
+P+ +K +P +K K RR+ + HLRR+
Sbjct: 93 IPASVKPIIPKKRKTKRKPRRKPKKMHLRRV 123
>Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical protein
C10C5.6b protein.
Length = 1782
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 203 PRMQPASDKTMHHLSLTRMVWRESKKRNWLAPRK 304
P MQ D TM HLS +M+ R++ K PRK
Sbjct: 1042 PEMQANIDNTMAHLS-RKMIARKNSKATVEMPRK 1074
>Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical protein
C10C5.6a protein.
Length = 1776
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 203 PRMQPASDKTMHHLSLTRMVWRESKKRNWLAPRK 304
P MQ D TM HLS +M+ R++ K PRK
Sbjct: 1042 PEMQANIDNTMAHLS-RKMIARKNSKATVEMPRK 1074
>Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical protein
C10C5.6b protein.
Length = 1782
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 203 PRMQPASDKTMHHLSLTRMVWRESKKRNWLAPRK 304
P MQ D TM HLS +M+ R++ K PRK
Sbjct: 1042 PEMQANIDNTMAHLS-RKMIARKNSKATVEMPRK 1074
>Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical protein
C10C5.6a protein.
Length = 1776
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 203 PRMQPASDKTMHHLSLTRMVWRESKKRNWLAPRK 304
P MQ D TM HLS +M+ R++ K PRK
Sbjct: 1042 PEMQANIDNTMAHLS-RKMIARKNSKATVEMPRK 1074
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/42 (26%), Positives = 25/42 (59%)
Frame = +1
Query: 340 VKKVTNKERRRKQNQHLRRLLTPKNAVMVINEMIPREQIANN 465
+K + ++E+R+K+ + R K + +I +M+P + + NN
Sbjct: 798 LKAIADEEKRKKEREEKARQEAEKPSNHLIADMMPSQTLYNN 839
>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
Length = 1800
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 203 PRMQPASDKTMHHLSLTRMVWRESKKRNWLAPRK 304
P MQ D TM HLS +M+ R++ K PRK
Sbjct: 1066 PEMQANIDNTMAHLS-RKMIARKNSKATVEMPRK 1098
>U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical
protein C43E11.11 protein.
Length = 656
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 316 WMKSKLPGVKKVTNKERRRKQNQHLRRLLTPKNAVMVIN 432
W+K+ + KV E RR + L+R L N+ MV++
Sbjct: 166 WLKNMVDTKLKVAENEVRRSGAEELKRGLASLNSSMVVS 204
>U88314-1|AAF99885.1| 342|Caenorhabditis elegans Hypothetical
protein C46H11.6 protein.
Length = 342
Score = 26.6 bits (56), Expect = 10.0
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = +1
Query: 142 AANHFNLEMDSAVSDEPRDVAEDAACVGQNNAPFEFDTNGMEGIEEKKLAGSKEELPSWM 321
+AN ++S D +A DA C+G+N + + N ++ ++ K + S++
Sbjct: 220 SANTLRHLIESVAPDPDVKMANDAICIGRNASNMHY--NVLKKLQPKSIL-SRDV----F 272
Query: 322 KSKLPGVKKVTNKERRRKQN 381
K K P KK K + K N
Sbjct: 273 KGKNPREKKPGKKLSKEKDN 292
>U13875-8|AAN63443.1| 633|Caenorhabditis elegans Hypothetical
protein C26E6.7a protein.
Length = 633
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +3
Query: 333 TGSEESDKQGTSPQTEPAPKA-TPHAEKCSHGDQRND 440
T S D+Q +PA K TP E C+ ++ ND
Sbjct: 9 TPSTSEDEQVVRKSEKPASKPPTPEVEDCTFSEKNND 45
>U13875-7|AAN63444.1| 635|Caenorhabditis elegans Hypothetical
protein C26E6.7b protein.
Length = 635
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +3
Query: 333 TGSEESDKQGTSPQTEPAPKA-TPHAEKCSHGDQRND 440
T S D+Q +PA K TP E C+ ++ ND
Sbjct: 9 TPSTSEDEQVVRKSEKPASKPPTPEVEDCTFSEKNND 45
>AF022974-8|AAX22288.1| 289|Caenorhabditis elegans Serpentine
receptor, class sx protein10 protein.
Length = 289
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 383 WFCLRRRSLFVTFFTPGSLLFIH 315
+F + F+TF T G+LLFIH
Sbjct: 9 YFAAAYKVFFITFGTIGNLLFIH 31
>AF003134-6|AAB54146.3| 827|Caenorhabditis elegans Hypothetical
protein ZC581.9 protein.
Length = 827
Score = 26.6 bits (56), Expect = 10.0
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -3
Query: 109 DMCDFFSIVCMYQCLCICN 53
D CD SIV ++ C+ +CN
Sbjct: 538 DRCDVSSIVHLFGCISLCN 556
>AC006662-3|AAF39895.1| 368|Caenorhabditis elegans Hypothetical
protein H23L24.4 protein.
Length = 368
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = -1
Query: 477 LHFEIIGNLLPRNHFVDHHDCIFRREESP*VLVLFAATFLVCH 349
L+F I+ N+ R DH + S +L+ F +CH
Sbjct: 226 LNFRILSNISNRRVSFDHKSRFAQERRSVTLLISIVTMFFLCH 268
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,697,493
Number of Sequences: 27780
Number of extensions: 280269
Number of successful extensions: 915
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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