Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1913
(705 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.6
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.6
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.6
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.6
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.6
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 22 5.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 5.6
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 5.6
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 5.6
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 5.6
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 21 7.4
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 21 7.4
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 21 9.8
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +2
Query: 458 YSDILDIRVSQERRDESDESLYESAD 535
Y + D+R++ + + D +Y SAD
Sbjct: 72 YGGVKDLRITPNKLWKPDVLMYNSAD 97
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +2
Query: 458 YSDILDIRVSQERRDESDESLYESAD 535
Y + D+R++ + + D +Y SAD
Sbjct: 72 YGGVKDLRITPNKLWKPDVLMYNSAD 97
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +2
Query: 458 YSDILDIRVSQERRDESDESLYESAD 535
Y + D+R++ + + D +Y SAD
Sbjct: 72 YGGVKDLRITPNKLWKPDVLMYNSAD 97
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +2
Query: 458 YSDILDIRVSQERRDESDESLYESAD 535
Y + D+R++ + + D +Y SAD
Sbjct: 72 YGGVKDLRITPNKLWKPDVLMYNSAD 97
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +2
Query: 458 YSDILDIRVSQERRDESDESLYESAD 535
Y + D+R++ + + D +Y SAD
Sbjct: 72 YGGVKDLRITPNKLWKPDVLMYNSAD 97
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 491 ERRDESDESLYESADGHSDAISASDDAIPR 580
++ DESDE ++ D+ S S+D PR
Sbjct: 81 KKEDESDEEKPTTSFKLKDSSSDSEDERPR 110
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 491 ERRDESDESLYESADGHSDAISA 559
E + E + YE+ H+DA SA
Sbjct: 529 EIQKEKGDEYYETISNHTDASSA 551
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 491 ERRDESDESLYESADGHSDAISA 559
E + E + YE+ H+DA SA
Sbjct: 529 EIQKEKGDEYYETISNHTDASSA 551
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 491 ERRDESDESLYESADGHSDAISA 559
E + E + YE+ H+DA SA
Sbjct: 529 EIQKEKGDEYYETISNHTDASSA 551
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 491 ERRDESDESLYESADGHSDAISA 559
E + E + YE+ H+DA SA
Sbjct: 529 EIQKEKGDEYYETISNHTDASSA 551
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory receptor
candidate 56 protein.
Length = 358
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/35 (22%), Positives = 18/35 (51%)
Frame = -3
Query: 157 VIFRSFSFNTSRKRFSIIFSAILSRHGTNLL*QIK 53
+ F S+ + T I+F ++ + NLL +++
Sbjct: 163 IFFASYQYGTKTYSLFIVFMTVILPYFINLLMELQ 197
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory receptor
candidate 21 protein.
Length = 386
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/35 (22%), Positives = 18/35 (51%)
Frame = -3
Query: 157 VIFRSFSFNTSRKRFSIIFSAILSRHGTNLL*QIK 53
+ F S+ + T I+F ++ + NLL +++
Sbjct: 163 IFFASYQYGTKTYSLFIVFMTVILPYFINLLMELQ 197
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -1
Query: 174 FRDNRMLFLEVFPLTLPAKDFQ 109
FRD +++F+E+ T+ K Q
Sbjct: 517 FRDQKIMFIELDKFTVNLKQGQ 538
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,885
Number of Sequences: 336
Number of extensions: 2123
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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