Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1913
(705 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical p... 29 2.4
AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical... 29 3.2
AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical... 29 3.2
AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical ... 29 3.2
AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical... 29 3.2
AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical... 29 3.2
AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical ... 29 3.2
Z72515-1|CAA96681.1| 419|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF101309-5|ABD94097.1| 543|Caenorhabditis elegans Hypothetical ... 28 7.5
AF101309-4|AAV58863.1| 669|Caenorhabditis elegans Hypothetical ... 28 7.5
AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical ... 28 7.5
AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical ... 28 7.5
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z50858-6|CAD44135.1| 949|Caenorhabditis elegans Hypothetical pr... 27 9.9
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 27 9.9
AL021567-6|CAD44122.1| 949|Caenorhabditis elegans Hypothetical ... 27 9.9
AL021567-2|CAD44121.1| 947|Caenorhabditis elegans Hypothetical ... 27 9.9
AL021567-1|CAA16508.2| 898|Caenorhabditis elegans Hypothetical ... 27 9.9
>Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical
protein F44D12.1 protein.
Length = 1034
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 7/46 (15%)
Frame = -3
Query: 274 TANSLNTFRG--KSKSFLSNHTASDARPYYV-----CGTLISGQPN 158
T + +++ RG +SF SN T SDARPY + T++ G+P+
Sbjct: 513 TMSQISSHRGGWDGRSFSSNTTTSDARPYSMHFTPTSSTIMEGKPH 558
>AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6c protein.
Length = 1245
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 198 PTTCAELSFRDNRMLFLEVFPLTLPAKDFQLFLVLSF 88
P CA+ +R + LF EVFP LP +F++ F
Sbjct: 857 PDPCAQSQYRLDYDLFSEVFPRLLPWPVTNIFIIRVF 893
>AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 198 PTTCAELSFRDNRMLFLEVFPLTLPAKDFQLFLVLSF 88
P CA+ +R + LF EVFP LP +F++ F
Sbjct: 857 PDPCAQSQYRLDYDLFSEVFPRLLPWPVTNIFIIRVF 893
>AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 198 PTTCAELSFRDNRMLFLEVFPLTLPAKDFQLFLVLSF 88
P CA+ +R + LF EVFP LP +F++ F
Sbjct: 857 PDPCAQSQYRLDYDLFSEVFPRLLPWPVTNIFIIRVF 893
>AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6c protein.
Length = 1245
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 198 PTTCAELSFRDNRMLFLEVFPLTLPAKDFQLFLVLSF 88
P CA+ +R + LF EVFP LP +F++ F
Sbjct: 857 PDPCAQSQYRLDYDLFSEVFPRLLPWPVTNIFIIRVF 893
>AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 198 PTTCAELSFRDNRMLFLEVFPLTLPAKDFQLFLVLSF 88
P CA+ +R + LF EVFP LP +F++ F
Sbjct: 857 PDPCAQSQYRLDYDLFSEVFPRLLPWPVTNIFIIRVF 893
>AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 198 PTTCAELSFRDNRMLFLEVFPLTLPAKDFQLFLVLSF 88
P CA+ +R + LF EVFP LP +F++ F
Sbjct: 857 PDPCAQSQYRLDYDLFSEVFPRLLPWPVTNIFIIRVF 893
>Z72515-1|CAA96681.1| 419|Caenorhabditis elegans Hypothetical
protein T11A5.1 protein.
Length = 419
Score = 28.7 bits (61), Expect = 4.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 343 RLLDSRFRFAFKPHHFHGYT 284
+L+ + F F+FKP HFH ++
Sbjct: 383 KLISNLFEFSFKPSHFHEFS 402
>AF101309-5|ABD94097.1| 543|Caenorhabditis elegans Hypothetical
protein H24G06.1e protein.
Length = 543
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 488 QERRDESDESLYESADGHSDAISASDDAIPRLKTPRLARNLSSSPLR 628
Q+RR SD S SA D + S DA+ +L R + SS LR
Sbjct: 121 QQRRRGSDVSYVRSATRGRDEMRKSTDALNKLMAVRSKLHQSSENLR 167
>AF101309-4|AAV58863.1| 669|Caenorhabditis elegans Hypothetical
protein H24G06.1d protein.
Length = 669
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 488 QERRDESDESLYESADGHSDAISASDDAIPRLKTPRLARNLSSSPLR 628
Q+RR SD S SA D + S DA+ +L R + SS LR
Sbjct: 247 QQRRRGSDVSYVRSATRGRDEMRKSTDALNKLMAVRSKLHQSSENLR 293
>AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical
protein H24G06.1b protein.
Length = 1601
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 488 QERRDESDESLYESADGHSDAISASDDAIPRLKTPRLARNLSSSPLR 628
Q+RR SD S SA D + S DA+ +L R + SS LR
Sbjct: 1179 QQRRRGSDVSYVRSATRGRDEMRKSTDALNKLMAVRSKLHQSSENLR 1225
>AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical
protein H24G06.1a protein.
Length = 1680
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 488 QERRDESDESLYESADGHSDAISASDDAIPRLKTPRLARNLSSSPLR 628
Q+RR SD S SA D + S DA+ +L R + SS LR
Sbjct: 1258 QQRRRGSDVSYVRSATRGRDEMRKSTDALNKLMAVRSKLHQSSENLR 1304
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = +2
Query: 485 SQERRDESDESLYESADGHSDAISASDDAIPRLKTPRLARNLSSSPLRTKEIEVREERTQ 664
SQ R+ + S + + I DD + TP R+ +SP + E RE +
Sbjct: 44 SQSPRESREVSQETETSENQEKIKEKDDGDDQPGTPNSYRSRETSPAPKRSKETRESESP 103
Query: 665 E 667
E
Sbjct: 104 E 104
>Z50858-6|CAD44135.1| 949|Caenorhabditis elegans Hypothetical
protein F21A10.2c protein.
Length = 949
Score = 27.5 bits (58), Expect = 9.9
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Frame = +2
Query: 506 SDESLYESADGHSD-AISASDDAIPRLKTPRLARNLSSS-----PLRTK-EIEVREERTQ 664
+ +LY + + SD +I+ SDD IP K PR+ +N+ S P+ K EV EE Q
Sbjct: 200 AQSNLYNALNVSSDESINGSDD-IPNRKRPRMDQNMDPSFIMHAPVSGKLGAEVTEEGGQ 258
Query: 665 EN 670
N
Sbjct: 259 PN 260
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = +2
Query: 485 SQERRDESDESLYESADGHSDAISASDDAIPRLKTPRLARNLSSSPLRTKEIEVREERTQ 664
SQ R+ + S + + I DD + TP R+ +SP + E RE +
Sbjct: 44 SQSPRESREVSQETETSENQEKIKEKDDGDDQPGTPNSYRSRETSPAPKRSKETRESESP 103
Query: 665 E 667
E
Sbjct: 104 E 104
>AL021567-6|CAD44122.1| 949|Caenorhabditis elegans Hypothetical
protein F21A10.2c protein.
Length = 949
Score = 27.5 bits (58), Expect = 9.9
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Frame = +2
Query: 506 SDESLYESADGHSD-AISASDDAIPRLKTPRLARNLSSS-----PLRTK-EIEVREERTQ 664
+ +LY + + SD +I+ SDD IP K PR+ +N+ S P+ K EV EE Q
Sbjct: 200 AQSNLYNALNVSSDESINGSDD-IPNRKRPRMDQNMDPSFIMHAPVSGKLGAEVTEEGGQ 258
Query: 665 EN 670
N
Sbjct: 259 PN 260
>AL021567-2|CAD44121.1| 947|Caenorhabditis elegans Hypothetical
protein F21A10.2b protein.
Length = 947
Score = 27.5 bits (58), Expect = 9.9
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Frame = +2
Query: 506 SDESLYESADGHSD-AISASDDAIPRLKTPRLARNLSSS-----PLRTK-EIEVREERTQ 664
+ +LY + + SD +I+ SDD IP K PR+ +N+ S P+ K EV EE Q
Sbjct: 198 AQSNLYNALNVSSDESINGSDD-IPNRKRPRMDQNMDPSFIMHAPVSGKLGAEVTEEGGQ 256
Query: 665 EN 670
N
Sbjct: 257 PN 258
>AL021567-1|CAA16508.2| 898|Caenorhabditis elegans Hypothetical
protein F21A10.2a protein.
Length = 898
Score = 27.5 bits (58), Expect = 9.9
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Frame = +2
Query: 506 SDESLYESADGHSD-AISASDDAIPRLKTPRLARNLSSS-----PLRTK-EIEVREERTQ 664
+ +LY + + SD +I+ SDD IP K PR+ +N+ S P+ K EV EE Q
Sbjct: 149 AQSNLYNALNVSSDESINGSDD-IPNRKRPRMDQNMDPSFIMHAPVSGKLGAEVTEEGGQ 207
Query: 665 EN 670
N
Sbjct: 208 PN 209
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,891,380
Number of Sequences: 27780
Number of extensions: 198327
Number of successful extensions: 589
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 589
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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