Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1912
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        28   0.33 
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    27   0.43 
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    24   5.3  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   9.2  

>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 15/65 (23%), Positives = 32/65 (49%)
 Frame = +3

Query: 282 ASEKQHRYHNLLNDDHANEMLEGEGAGLAARVAELEVRCARQAEELLCLRSTLADALRRL 461
           A+E++ R  ++   +   +  +   A + A + E+E +  R+AEE +  R    + LR +
Sbjct: 384 AAEEKDRIASIKEREQTEQQRQLRAARMQAHLDEIEWQRQREAEEAVLTRREYEERLRNI 443

Query: 462 NALEG 476
           +   G
Sbjct: 444 DVTFG 448


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 27.5 bits (58), Expect = 0.43
 Identities = 15/58 (25%), Positives = 26/58 (44%)
 Frame = +1

Query: 496 RVHRETERIQDHQEHQQENSG*DNRRIVRQLKGLPVMGPPRPRCPKDVVHNTQSTGSL 669
           R H   +  Q  Q+HQ E++G   + +  +     V   P P+ P     +T  +G+L
Sbjct: 147 RHHLPQQYQQQQQQHQLEHNGGREQMMKNETSIDEVPNAPAPKAPCQPAGSTSDSGTL 204


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -1

Query: 493 EGGGALPSKALSLLRASARVDRRQSSSSACLA 398
           E GG LPS        SA    + S+SS C A
Sbjct: 169 ENGGELPSNKQQQQLTSASSSNQLSNSSLCSA 200


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 15/49 (30%), Positives = 20/49 (40%)
 Frame = +3

Query: 288 EKQHRYHNLLNDDHANEMLEGEGAGLAARVAELEVRCARQAEELLCLRS 434
           E Q  +  L       E    +GA   ARV ELE R      +L  +R+
Sbjct: 165 EVQQWFEELKEKRSLQEKSTNQGAEGTARVRELEARLEALEAQLQSMRA 213


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,941
Number of Sequences: 2352
Number of extensions: 15135
Number of successful extensions: 38
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)