Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1912
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033043-1|AAH33043.1|  815|Homo sapiens echinoderm microtubule ...    36   0.11 
BC032541-1|AAH32541.1|  815|Homo sapiens echinoderm microtubule ...    36   0.11 
AJ420603-1|CAD12600.2|  815|Homo sapiens echinoderm microtubule ...    36   0.11 
AY193890-1|AAO24709.1|  424|Homo sapiens zygote arrest 1 protein.      32   2.3  
AY191416-1|AAO24707.1|  424|Homo sapiens zygote arrest 1 protein.      32   2.3  
BC146799-1|AAI46800.1|  923|Homo sapiens EML4 protein protein.         31   4.0  
BC104647-1|AAI04648.1|  173|Homo sapiens EML4 protein protein.         31   4.0  
AF177377-1|AAG09279.2|  981|Homo sapiens cytoplasmic protein pro...    31   4.0  
AC096668-1|AAY14895.1|   60|Homo sapiens unknown protein.              31   4.0  
AB275889-1|BAF73612.1| 1310|Homo sapiens EML4-ALK variant 2 prot...    31   4.0  
AB274722-1|BAF73611.1| 1059|Homo sapiens EML4-ALK variant 1 prot...    31   4.0  
BC002828-1|AAH02828.1|  109|Homo sapiens AGGF1 protein protein.        31   5.2  

>BC033043-1|AAH33043.1|  815|Homo sapiens echinoderm microtubule
           associated protein like 1 protein.
          Length = 815

 Score = 36.3 bits (80), Expect = 0.11
 Identities = 21/52 (40%), Positives = 29/52 (55%)
 Frame = +3

Query: 318 NDDHANEMLEGEGAGLAARVAELEVRCARQAEELLCLRSTLADALRRLNALE 473
           NDD A+     E   +  R+A LE R   Q +++  L+S LAD +RRLN  E
Sbjct: 22  NDDSASAASSME---VTDRIASLEQRVQMQEDDIQLLKSALADVVRRLNITE 70


>BC032541-1|AAH32541.1|  815|Homo sapiens echinoderm microtubule
           associated protein like 1 protein.
          Length = 815

 Score = 36.3 bits (80), Expect = 0.11
 Identities = 21/52 (40%), Positives = 29/52 (55%)
 Frame = +3

Query: 318 NDDHANEMLEGEGAGLAARVAELEVRCARQAEELLCLRSTLADALRRLNALE 473
           NDD A+     E   +  R+A LE R   Q +++  L+S LAD +RRLN  E
Sbjct: 22  NDDSASAASSME---VTDRIASLEQRVQMQEDDIQLLKSALADVVRRLNITE 70


>AJ420603-1|CAD12600.2|  815|Homo sapiens echinoderm microtubule
           associated protein protein.
          Length = 815

 Score = 36.3 bits (80), Expect = 0.11
 Identities = 21/52 (40%), Positives = 29/52 (55%)
 Frame = +3

Query: 318 NDDHANEMLEGEGAGLAARVAELEVRCARQAEELLCLRSTLADALRRLNALE 473
           NDD A+     E   +  R+A LE R   Q +++  L+S LAD +RRLN  E
Sbjct: 22  NDDSASAASSME---VTDRIASLEQRVQMQEDDIQLLKSALADVVRRLNITE 70


>AY193890-1|AAO24709.1|  424|Homo sapiens zygote arrest 1 protein.
          Length = 424

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 19/38 (50%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +3

Query: 447 ALRRLNA-LEGRAPPPSTGTQRNGTYTGSSGTPTRELR 557
           ALRRL A LEG  P P+ G QR+G   G  G P   L+
Sbjct: 186 ALRRLTAFLEG--PGPAAGEQRSGASDGERGPPPARLQ 221


>AY191416-1|AAO24707.1|  424|Homo sapiens zygote arrest 1 protein.
          Length = 424

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 19/38 (50%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +3

Query: 447 ALRRLNA-LEGRAPPPSTGTQRNGTYTGSSGTPTRELR 557
           ALRRL A LEG  P P+ G QR+G   G  G P   L+
Sbjct: 186 ALRRLTAFLEG--PGPAAGEQRSGASDGERGPPPARLQ 221


>BC146799-1|AAI46800.1|  923|Homo sapiens EML4 protein protein.
          Length = 923

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +3

Query: 372 RVAELEVRCARQAEELLCLRSTLADALRRL 461
           R++ LE R  +Q +E+  L++ LAD LRRL
Sbjct: 23  RLSALESRVQQQEDEITVLKAALADVLRRL 52


>BC104647-1|AAI04648.1|  173|Homo sapiens EML4 protein protein.
          Length = 173

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +3

Query: 372 RVAELEVRCARQAEELLCLRSTLADALRRL 461
           R++ LE R  +Q +E+  L++ LAD LRRL
Sbjct: 23  RLSALESRVQQQEDEITVLKAALADVLRRL 52


>AF177377-1|AAG09279.2|  981|Homo sapiens cytoplasmic protein
           protein.
          Length = 981

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +3

Query: 372 RVAELEVRCARQAEELLCLRSTLADALRRL 461
           R++ LE R  +Q +E+  L++ LAD LRRL
Sbjct: 23  RLSALESRVQQQEDEITVLKAALADVLRRL 52


>AC096668-1|AAY14895.1|   60|Homo sapiens unknown protein.
          Length = 60

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +3

Query: 372 RVAELEVRCARQAEELLCLRSTLADALRRL 461
           R++ LE R  +Q +E+  L++ LAD LRRL
Sbjct: 14  RLSALESRVQQQEDEITVLKAALADVLRRL 43


>AB275889-1|BAF73612.1| 1310|Homo sapiens EML4-ALK variant 2
           protein.
          Length = 1310

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +3

Query: 372 RVAELEVRCARQAEELLCLRSTLADALRRL 461
           R++ LE R  +Q +E+  L++ LAD LRRL
Sbjct: 23  RLSALESRVQQQEDEITVLKAALADVLRRL 52


>AB274722-1|BAF73611.1| 1059|Homo sapiens EML4-ALK variant 1
           protein.
          Length = 1059

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +3

Query: 372 RVAELEVRCARQAEELLCLRSTLADALRRL 461
           R++ LE R  +Q +E+  L++ LAD LRRL
Sbjct: 23  RLSALESRVQQQEDEITVLKAALADVLRRL 52


>BC002828-1|AAH02828.1|  109|Homo sapiens AGGF1 protein protein.
          Length = 109

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +1

Query: 478 ELHHPPRVHRETERIQDHQEHQQENSG*DNRRIVRQLKGLPVMGPPRPRCP 630
           EL    R  RE E++  H E   +N+  +N+ +  Q++G     PP+PR P
Sbjct: 35  ELRSCKRQVREIEKLLHHTERLYQNAESNNQELRTQVRG-----PPQPRAP 80


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,614,465
Number of Sequences: 237096
Number of extensions: 2014172
Number of successful extensions: 5455
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5441
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)