Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1911
(638 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039717-4|AAO21385.1| 303|Caenorhabditis elegans Abnormal daue... 31 0.70
AF039717-3|AAK82917.1| 530|Caenorhabditis elegans Abnormal daue... 31 0.70
AF039717-2|AAK82918.1| 508|Caenorhabditis elegans Abnormal daue... 31 0.70
AF039717-1|AAK82919.1| 510|Caenorhabditis elegans Abnormal daue... 31 0.70
AF032112-1|AAC47803.1| 510|Caenorhabditis elegans DAF-16 protein. 31 0.70
AF020344-1|AAB84392.1| 530|Caenorhabditis elegans fork head-rel... 31 0.70
AF020343-1|AAB84391.1| 508|Caenorhabditis elegans fork head-rel... 31 0.70
AF020342-1|AAB84390.1| 510|Caenorhabditis elegans fork head-rel... 31 0.70
Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical pr... 29 2.1
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 29 2.1
Z83228-9|CAB05737.2| 539|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z73969-17|CAI79127.1| 111|Caenorhabditis elegans Hypothetical p... 29 2.8
U67079-1|AAB40716.1| 539|Caenorhabditis elegans C2-HC type zinc... 29 2.8
U41034-8|AAA82382.1| 669|Caenorhabditis elegans Hypothetical pr... 28 4.9
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 28 4.9
>AF039717-4|AAO21385.1| 303|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform e protein.
Length = 303
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 366 QPYAAYPPPHNTNN-RSSCKATPTYLSAYGMSGVGSVPTTGFGTQPSPYAYSSY-NGGLS 539
+P A P H N+ R SC P + VP+T F P P AY +Y NGG++
Sbjct: 177 EPIAPPPSYHELNSVRGSCAQNPLLRNPI-------VPSTNFKPMPLPGAYGNYQNGGIT 229
>AF039717-3|AAK82917.1| 530|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform a protein.
Length = 530
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 366 QPYAAYPPPHNTNN-RSSCKATPTYLSAYGMSGVGSVPTTGFGTQPSPYAYSSY-NGGLS 539
+P A P H N+ R SC P + VP+T F P P AY +Y NGG++
Sbjct: 404 EPIAPPPSYHELNSVRGSCAQNPLLRNPI-------VPSTNFKPMPLPGAYGNYQNGGIT 456
>AF039717-2|AAK82918.1| 508|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform b protein.
Length = 508
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 366 QPYAAYPPPHNTNN-RSSCKATPTYLSAYGMSGVGSVPTTGFGTQPSPYAYSSY-NGGLS 539
+P A P H N+ R SC P + VP+T F P P AY +Y NGG++
Sbjct: 382 EPIAPPPSYHELNSVRGSCAQNPLLRNPI-------VPSTNFKPMPLPGAYGNYQNGGIT 434
>AF039717-1|AAK82919.1| 510|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform c protein.
Length = 510
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 366 QPYAAYPPPHNTNN-RSSCKATPTYLSAYGMSGVGSVPTTGFGTQPSPYAYSSY-NGGLS 539
+P A P H N+ R SC P + VP+T F P P AY +Y NGG++
Sbjct: 384 EPIAPPPSYHELNSVRGSCAQNPLLRNPI-------VPSTNFKPMPLPGAYGNYQNGGIT 436
>AF032112-1|AAC47803.1| 510|Caenorhabditis elegans DAF-16 protein.
Length = 510
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 366 QPYAAYPPPHNTNN-RSSCKATPTYLSAYGMSGVGSVPTTGFGTQPSPYAYSSY-NGGLS 539
+P A P H N+ R SC P + VP+T F P P AY +Y NGG++
Sbjct: 384 EPIAPPPSYHELNSVRGSCAQNPLLRNPI-------VPSTNFKPMPLPGAYGNYQNGGIT 436
>AF020344-1|AAB84392.1| 530|Caenorhabditis elegans fork
head-related transcriptionfactor DAF-16b protein.
Length = 530
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 366 QPYAAYPPPHNTNN-RSSCKATPTYLSAYGMSGVGSVPTTGFGTQPSPYAYSSY-NGGLS 539
+P A P H N+ R SC P + VP+T F P P AY +Y NGG++
Sbjct: 404 EPIAPPPSYHELNSVRGSCAQNPLLRNPI-------VPSTNFKPMPLPGAYGNYQNGGIT 456
>AF020343-1|AAB84391.1| 508|Caenorhabditis elegans fork
head-related transcriptionfactor DAF-16a2 protein.
Length = 508
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 366 QPYAAYPPPHNTNN-RSSCKATPTYLSAYGMSGVGSVPTTGFGTQPSPYAYSSY-NGGLS 539
+P A P H N+ R SC P + VP+T F P P AY +Y NGG++
Sbjct: 382 EPIAPPPSYHELNSVRGSCAQNPLLRNPI-------VPSTNFKPMPLPGAYGNYQNGGIT 434
>AF020342-1|AAB84390.1| 510|Caenorhabditis elegans fork
head-related transcriptionfactor DAF-16a1 protein.
Length = 510
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 366 QPYAAYPPPHNTNN-RSSCKATPTYLSAYGMSGVGSVPTTGFGTQPSPYAYSSY-NGGLS 539
+P A P H N+ R SC P + VP+T F P P AY +Y NGG++
Sbjct: 384 EPIAPPPSYHELNSVRGSCAQNPLLRNPI-------VPSTNFKPMPLPGAYGNYQNGGIT 436
>Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical
protein K04D7.4 protein.
Length = 1159
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -2
Query: 196 PPVLSSFINQATAEDEEVAHRPPDDVKGSARPPKVVVVAHPLTIPQLSTSEVP 38
PP + I T+E EV PPD++ G V++ A TIP+ T + P
Sbjct: 240 PPQIQK-IRNITSECVEVTITPPDEMNGELDKYLVLIQAVNETIPRKMTFDKP 291
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 507 YAYSSYNGGLSQTFTPTQQDYSNYAAGYAEHNVAQYKWAITQHP 638
+++ + N + + T QD YAA E NV Y W + +P
Sbjct: 126 HSFMNENSPAAGSIAGTPQDQRMYAAASKEFNVKVYNWNLAGNP 169
>Z83228-9|CAB05737.2| 539|Caenorhabditis elegans Hypothetical
protein F52F12.6 protein.
Length = 539
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 6/83 (7%)
Frame = +3
Query: 369 PYAAYPPPHNTNNRSSCKATPTYLSAYGMSGVGSVPTTGF---GTQPSP---YAYSSYNG 530
P A PPH++ + S + T+ + + + PT F G+ PSP Y++S
Sbjct: 201 PLTASSPPHSSGSESRVMSPITHTNISDELSISTTPTVAFTPNGSIPSPGTGYSWSIRRE 260
Query: 531 GLSQTFTPTQQDYSNYAAGYAEH 599
G TP + Y H
Sbjct: 261 GKLACPTPGCDGSGHQTGLYTHH 283
>Z73969-17|CAI79127.1| 111|Caenorhabditis elegans Hypothetical
protein C12D8.18 protein.
Length = 111
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3
Query: 429 PTYLSAYGMSGVGSVPTTGFGTQPSPYAYSSYNGGLSQTFTPTQ 560
P+Y YG G+ GFG+ AY+ Y G F PTQ
Sbjct: 72 PSYYGGYGYGAYGAYGGYGFGS-----AYAGYYGKREAGFGPTQ 110
>U67079-1|AAB40716.1| 539|Caenorhabditis elegans C2-HC type zinc
finger proteinC.e-MyT1 protein.
Length = 539
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 6/83 (7%)
Frame = +3
Query: 369 PYAAYPPPHNTNNRSSCKATPTYLSAYGMSGVGSVPTTGF---GTQPSP---YAYSSYNG 530
P A PPH++ + S + T+ + + + PT F G+ PSP Y++S
Sbjct: 201 PLTASSPPHSSGSESRVMSPITHTNISDELSISTTPTVAFTPNGSIPSPGTGYSWSIRRE 260
Query: 531 GLSQTFTPTQQDYSNYAAGYAEH 599
G TP + Y H
Sbjct: 261 GKLACPTPGCDGSGHQTGLYTHH 283
>U41034-8|AAA82382.1| 669|Caenorhabditis elegans Hypothetical
protein M02D8.5 protein.
Length = 669
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 468 SVPTTGFGTQPSPYAYSSYNGGLSQTFTPTQQDYS 572
+V TGF T+ P Y NG + F+ T QD+S
Sbjct: 120 NVKITGFATEDEPVVYYFQNGA-NAIFSITHQDHS 153
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform a protein.
Length = 1256
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Frame = +3
Query: 360 YNQPYAAYPPPHNTN---NRSSCKATPTYLSAYGMSGVGSVPTTGFGTQPSPYAYSS 521
Y QP P T+ N KA +S+ +G S T FGT PSP Y+S
Sbjct: 221 YKQPTHPSPSQRETDFLRNLQRQKAEAHNMSSSWYAGDQSSRQTDFGTLPSPQHYNS 277
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,252,298
Number of Sequences: 27780
Number of extensions: 298173
Number of successful extensions: 1075
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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