Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1910
(527 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D21852-1|BAA04878.2| 974|Homo sapiens KIAA0029 protein. 32 1.1
BC041093-1|AAH41093.1| 1099|Homo sapiens R3H domain containing 1... 32 1.1
AC016742-1|AAY14728.1| 784|Homo sapiens unknown protein. 32 1.1
BC008794-1|AAH08794.1| 984|Homo sapiens POM121 membrane glycopr... 32 1.4
AB014518-1|BAA31593.2| 1052|Homo sapiens KIAA0618 protein protein. 32 1.4
BC100980-1|AAI00981.1| 415|Homo sapiens PPP4R1L protein protein. 29 7.6
BC100979-1|AAI00980.1| 415|Homo sapiens PPP4R1L protein protein. 29 7.6
AY336717-1|AAQ01561.1| 196|Homo sapiens interleukin 28C protein. 29 7.6
AL354834-1|CAI94892.2| 386|Homo sapiens protein phosphatase 4, ... 29 7.6
AL354776-1|CAI94993.2| 386|Homo sapiens protein phosphatase 4, ... 29 7.6
AK057583-1|BAB71529.1| 272|Homo sapiens 1 (PP4R1) mRNA. protein. 29 7.6
>D21852-1|BAA04878.2| 974|Homo sapiens KIAA0029 protein.
Length = 974
Score = 32.3 bits (70), Expect = 1.1
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 230 STSYVSSIPLISQPIAYSAHFIKKRSPQWPVSYIAPSSY 346
+ Y +S +SQP+ +I++ SPQ P Y AP Y
Sbjct: 489 TAGYPASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHY 527
>BC041093-1|AAH41093.1| 1099|Homo sapiens R3H domain containing 1
protein.
Length = 1099
Score = 32.3 bits (70), Expect = 1.1
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 230 STSYVSSIPLISQPIAYSAHFIKKRSPQWPVSYIAPSSY 346
+ Y +S +SQP+ +I++ SPQ P Y AP Y
Sbjct: 614 TAGYPASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHY 652
>AC016742-1|AAY14728.1| 784|Homo sapiens unknown protein.
Length = 784
Score = 32.3 bits (70), Expect = 1.1
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 230 STSYVSSIPLISQPIAYSAHFIKKRSPQWPVSYIAPSSY 346
+ Y +S +SQP+ +I++ SPQ P Y AP Y
Sbjct: 614 TAGYPASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHY 652
>BC008794-1|AAH08794.1| 984|Homo sapiens POM121 membrane
glycoprotein (rat) protein.
Length = 984
Score = 31.9 bits (69), Expect = 1.4
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Frame = +2
Query: 215 TPLLASTSYVSSIPLISQPIAYSAHFIKKRSPQWP---VSYIAPSSYITPNTYIASGPLG 385
+P + SS P + +PI + +K P P V+ APSS P T + P
Sbjct: 447 SPSSPAAPAASSAPPMFKPIFTAPPKSEKEGPTPPGPSVTATAPSSSSLPTTTSTTAP-- 504
Query: 386 ATTYTTPFVQTVPIASTASLPVEAHLIKKKVCPRLAKTYTGPTTYTG 526
T+ F P AS+P+ A K+ P A T T P +TG
Sbjct: 505 --TFQPVFSSMGP---PASVPLPAPFFKQTTTPATAPTTTAP-LFTG 545
>AB014518-1|BAA31593.2| 1052|Homo sapiens KIAA0618 protein protein.
Length = 1052
Score = 31.9 bits (69), Expect = 1.4
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Frame = +2
Query: 215 TPLLASTSYVSSIPLISQPIAYSAHFIKKRSPQWP---VSYIAPSSYITPNTYIASGPLG 385
+P + SS P + +PI + +K P P V+ APSS P T + P
Sbjct: 500 SPSSPAAPAASSAPPMFKPIFTAPPKSEKEGPTPPGPSVTATAPSSSSLPTTTSTTAP-- 557
Query: 386 ATTYTTPFVQTVPIASTASLPVEAHLIKKKVCPRLAKTYTGPTTYTG 526
T+ F P AS+P+ A K+ P A T T P +TG
Sbjct: 558 --TFQPVFSSMGP---PASVPLPAPFFKQTTTPATAPTTTAP-LFTG 598
>BC100980-1|AAI00981.1| 415|Homo sapiens PPP4R1L protein protein.
Length = 415
Score = 29.5 bits (63), Expect = 7.6
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +2
Query: 314 WPVSYIAPSSYITPNTYIASGPLGATTYTTPFVQTVPIASTASLPVEAHLIKKKVCPRLA 493
WP++ S + + + +SG G T+ + P+ S LPVE K CP +
Sbjct: 291 WPLTQDLDSGFASGSPAPSSG--GNTSPASLTRSAKPVRSEPELPVEGTSAKTSDCPHSS 348
Query: 494 KTYTGP 511
+ GP
Sbjct: 349 SSSDGP 354
>BC100979-1|AAI00980.1| 415|Homo sapiens PPP4R1L protein protein.
Length = 415
Score = 29.5 bits (63), Expect = 7.6
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +2
Query: 314 WPVSYIAPSSYITPNTYIASGPLGATTYTTPFVQTVPIASTASLPVEAHLIKKKVCPRLA 493
WP++ S + + + +SG G T+ + P+ S LPVE K CP +
Sbjct: 291 WPLTQDLDSGFASGSPAPSSG--GNTSPASLTRSAKPVRSEPELPVEGTSAKTSDCPHSS 348
Query: 494 KTYTGP 511
+ GP
Sbjct: 349 SSSDGP 354
>AY336717-1|AAQ01561.1| 196|Homo sapiens interleukin 28C protein.
Length = 196
Score = 29.5 bits (63), Expect = 7.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 375 ALLEPLPTRHPSCRPCRSHRLHHFPSKLI*SRKRSAPG 488
A ++P PT P R RLHH+P +L + K+ +PG
Sbjct: 135 ACIQPQPTAGPRTRG----RLHHWPHRLQEAPKKESPG 168
>AL354834-1|CAI94892.2| 386|Homo sapiens protein phosphatase 4,
regulatory subunit 1-like protein.
Length = 386
Score = 29.5 bits (63), Expect = 7.6
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +2
Query: 314 WPVSYIAPSSYITPNTYIASGPLGATTYTTPFVQTVPIASTASLPVEAHLIKKKVCPRLA 493
WP++ S + + + +SG G T+ + P+ S LPVE K CP +
Sbjct: 262 WPLTQDLDSGFASGSPAPSSG--GNTSPASLTRSAKPVRSEPELPVEGTSAKTSDCPHSS 319
Query: 494 KTYTGP 511
+ GP
Sbjct: 320 SSSDGP 325
>AL354776-1|CAI94993.2| 386|Homo sapiens protein phosphatase 4,
regulatory subunit 1-like protein.
Length = 386
Score = 29.5 bits (63), Expect = 7.6
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +2
Query: 314 WPVSYIAPSSYITPNTYIASGPLGATTYTTPFVQTVPIASTASLPVEAHLIKKKVCPRLA 493
WP++ S + + + +SG G T+ + P+ S LPVE K CP +
Sbjct: 262 WPLTQDLDSGFASGSPAPSSG--GNTSPASLTRSAKPVRSEPELPVEGTSAKTSDCPHSS 319
Query: 494 KTYTGP 511
+ GP
Sbjct: 320 SSSDGP 325
>AK057583-1|BAB71529.1| 272|Homo sapiens 1 (PP4R1) mRNA. protein.
Length = 272
Score = 29.5 bits (63), Expect = 7.6
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +2
Query: 314 WPVSYIAPSSYITPNTYIASGPLGATTYTTPFVQTVPIASTASLPVEAHLIKKKVCPRLA 493
WP++ S + + + +SG G T+ + P+ S LPVE K CP +
Sbjct: 148 WPLTQDLDSGFASGSPAPSSG--GNTSPASLTRSAKPVRSEPELPVEGTSAKTSDCPHSS 205
Query: 494 KTYTGP 511
+ GP
Sbjct: 206 SSSDGP 211
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,594,151
Number of Sequences: 237096
Number of extensions: 1666343
Number of successful extensions: 8469
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8468
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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