Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1910
(527 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical pr... 32 0.29
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 31 0.67
AF194964-1|AAF28314.1| 632|Caenorhabditis elegans polo-like kin... 30 1.2
AC024201-9|AAF36014.1| 632|Caenorhabditis elegans Polo kinase p... 30 1.2
Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical p... 29 2.1
Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical pr... 29 2.1
U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription f... 29 2.1
U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein ( Caeno... 29 2.1
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 29 2.7
U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF016428-3|AAO26000.3| 445|Caenorhabditis elegans Ground-like (... 29 2.7
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical pr... 28 4.8
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 27 6.3
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 27 6.3
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 27 6.3
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 27 8.3
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 27 8.3
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 27 8.3
>U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical
protein F53B3.2 protein.
Length = 634
Score = 31.9 bits (69), Expect = 0.29
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2
Query: 326 YIAPSSYITPNTYIASGPLGATTYTTPFVQTVPIASTASLPVEAHLI 466
+I PSS I N + P YTT T P++ TA LP E I
Sbjct: 295 FIRPSSIIRNNVWKKVTPSVTPEYTTSVFWTTPMSVTAELPSEPSTI 341
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 30.7 bits (66), Expect = 0.67
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 335 PSSYIT-PNTYIASGPLGATTYTTPFVQTVPIASTASLPVEAHLIKKKVCPRLAKTYTGP 511
PS+ +T PNT + S P ATT TT V T P ++ ++P + V + T P
Sbjct: 346 PSTVVTKPNTVVTSSPTVATTPTT--VVTTP-STVVTVPSTVVTVPTTVVTNPSTVVTAP 402
Query: 512 TT 517
+T
Sbjct: 403 ST 404
>AF194964-1|AAF28314.1| 632|Caenorhabditis elegans polo-like kinase
2 protein.
Length = 632
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 342 PTSLPTPTSQV--ALLEPLPTRHPSCRP-CRSH 431
PTS SQ+ LL+P+P+R P+ R CR H
Sbjct: 253 PTSASAAASQLIRVLLDPVPSRRPNARAVCRDH 285
>AC024201-9|AAF36014.1| 632|Caenorhabditis elegans Polo kinase
protein 2 protein.
Length = 632
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 342 PTSLPTPTSQV--ALLEPLPTRHPSCRP-CRSH 431
PTS SQ+ LL+P+P+R P+ R CR H
Sbjct: 253 PTSASAAASQLIRVLLDPVPSRRPNARAVCRDH 285
>Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 324 ATSLLAPTSLPTPTSQVALLEPLPTRHPS 410
+TS AP++ P PTS +LE PT P+
Sbjct: 100 STSTTAPSTAPAPTSTTDVLELKPTTAPA 128
>Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 324 ATSLLAPTSLPTPTSQVALLEPLPTRHPS 410
+TS AP++ P PTS +LE PT P+
Sbjct: 100 STSTTAPSTAPAPTSTTDVLELKPTTAPA 128
>Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical
protein T12G3.1 protein.
Length = 693
Score = 29.1 bits (62), Expect = 2.1
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2
Query: 350 TPNTYIASGPLGATTYTTPFVQTVPIASTASLPVEAHLIKKKVCPRLAKTYTGPTTYT 523
TPNT A+ L +TT TP V T P AS + A +++ + P L + P T
Sbjct: 520 TPNTEPATTELASTTSATPAV-TAP-ASIVPVTPTAPIVETLIVPPLPPVESNPEEVT 575
>U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription
factor E12/47 homolog protein.
Length = 399
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 324 ATSLLAPTSLPTPTSQVALLEPLPTRHPS 410
+TS AP++ P PTS +LE PT P+
Sbjct: 100 STSTTAPSTAPAPTSTTDVLELKPTTAPA 128
>U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein (
Caenorhabditis elegansN2 basic-helix-loop-helix
transcription factor E12/47homolog mRNA, complete cds.
).
Length = 399
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 324 ATSLLAPTSLPTPTSQVALLEPLPTRHPS 410
+TS AP++ P PTS +LE PT P+
Sbjct: 100 STSTTAPSTAPAPTSTTDVLELKPTTAPA 128
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 2 PVTSLTTVVSPGSTTISKLASSVVHPSPLVYST 100
P T+ TT +P TT K ++ P+P ST
Sbjct: 431 PTTTTTTTTTPAPTTTQKPTTTTTTPAPTTTST 463
>U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical
protein F56D3.1 protein.
Length = 441
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 353 PNTYIASGPLGATTYTT-PFVQTVPIASTASLPVEAHLIKKKVCPRLAKT 499
P T + P ATT T PFVQT P A+ A+LP + + + P + +T
Sbjct: 114 PTTIRTTRPPPATTIRTIPFVQTTP-ATFATLPPAPAVTRAPIQPFVPQT 162
>AF016428-3|AAO26000.3| 445|Caenorhabditis elegans Ground-like (grd
related) protein18 protein.
Length = 445
Score = 28.7 bits (61), Expect = 2.7
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = +2
Query: 200 TYHGKTPLLASTSYVSSIPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPN-TYIASG 376
+Y + PL S+SY+++IP Q +Y + P P + +Y TP+ T+I
Sbjct: 75 SYQNQQPLQPSSSYLANIPPFMQ--SYPQPPLFTTPPPLPQDN-SILNYPTPSQTFIPQQ 131
Query: 377 PLGATTYTTPFVQTVPIASTA-SLPVEAHLIKKK 475
L T+Y+T F P A +A L ++ +K+K
Sbjct: 132 TL-KTSYSTSFGSLGPPAPSAEKLNLQPPALKQK 164
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/56 (28%), Positives = 21/56 (37%)
Frame = +2
Query: 350 TPNTYIASGPLGATTYTTPFVQTVPIASTASLPVEAHLIKKKVCPRLAKTYTGPTT 517
TP T + TT TTP T P +T+ + + T T PTT
Sbjct: 223 TPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTT 278
>Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical
protein K02E2.8a protein.
Length = 188
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +2
Query: 290 FIKKRSPQWPVSYIAPSSYITPNTYIASGPLGATTYTTPFVQTVPIASTAS 442
F+K + P ++ P + P T + + A T T P T P+++T +
Sbjct: 7 FVKLAAACIPTQFVTP---LNPGTITTTTTISAPTTTVPITTTNPVSTTTT 54
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 27.5 bits (58), Expect = 6.3
Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 1/102 (0%)
Frame = +2
Query: 215 TPLLASTSYVSSIPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYI-TPNTYIASGPLGAT 391
TP A + SS + P+ ++ P PV+ P++ T T + T
Sbjct: 648 TPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVP--PVTTTTPTTTTSTTTTTTTTTTTTQT 705
Query: 392 TYTTPFVQTVPIASTASLPVEAHLIKKKVCPRLAKTYTGPTT 517
T TTP V T + + PV + P T T PTT
Sbjct: 706 TPTTPVVTTPSTITPTTRPVTQPASQPATQPATTPTTTIPTT 747
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical protein
C12D12.1c protein.
Length = 825
Score = 27.5 bits (58), Expect = 6.3
Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 1/102 (0%)
Frame = +2
Query: 215 TPLLASTSYVSSIPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYI-TPNTYIASGPLGAT 391
TP A + SS + P+ ++ P PV+ P++ T T + T
Sbjct: 704 TPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVP--PVTTTTPTTTTSTTTTTTTTTTTTQT 761
Query: 392 TYTTPFVQTVPIASTASLPVEAHLIKKKVCPRLAKTYTGPTT 517
T TTP V T + + PV + P T T PTT
Sbjct: 762 TPTTPVVTTPSTITPTTRPVTQPASQPATQPATTPTTTIPTT 803
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 27.5 bits (58), Expect = 6.3
Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 1/102 (0%)
Frame = +2
Query: 215 TPLLASTSYVSSIPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYI-TPNTYIASGPLGAT 391
TP A + SS + P+ ++ P PV+ P++ T T + T
Sbjct: 527 TPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVP--PVTTTTPTTTTSTTTTTTTTTTTTQT 584
Query: 392 TYTTPFVQTVPIASTASLPVEAHLIKKKVCPRLAKTYTGPTT 517
T TTP V T + + PV + P T T PTT
Sbjct: 585 TPTTPVVTTPSTITPTTRPVTQPASQPATQPATTPTTTIPTT 626
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 27.1 bits (57), Expect = 8.3
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +2
Query: 197 TTYHGKTPLLASTSYVSSIPLISQPIAYSAHFIKKRSPQWPVSY--IAPSSYITPNTYIA 370
+TY TP AS+S + IS +A + S S +PSS T +T
Sbjct: 248 STYGSSTPS-ASSSSAGTASTISGSTGSTATIVPGSSSSVGSSTQSASPSSPGTMST--V 304
Query: 371 SGPLGATTYTTPFVQTVPIASTASLP 448
SGP G+T P T P S++ P
Sbjct: 305 SGPTGSTVTVVPGSSTSPAPSSSPNP 330
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 27.1 bits (57), Expect = 8.3
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +2
Query: 197 TTYHGKTPLLASTSYVSSIPLISQPIAYSAHFIKKRSPQWPVSY--IAPSSYITPNTYIA 370
+TY TP AS+S + IS +A + S S +PSS T +T
Sbjct: 455 STYGSSTPS-ASSSSAGTASTISGSTGSTATIVPGSSSSVGSSTQSASPSSPGTMST--V 511
Query: 371 SGPLGATTYTTPFVQTVPIASTASLP 448
SGP G+T P T P S++ P
Sbjct: 512 SGPTGSTVTVVPGSSTSPAPSSSPNP 537
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 27.1 bits (57), Expect = 8.3
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +2
Query: 197 TTYHGKTPLLASTSYVSSIPLISQPIAYSAHFIKKRSPQWPVSY--IAPSSYITPNTYIA 370
+TY TP AS+S + IS +A + S S +PSS T +T
Sbjct: 455 STYGSSTPS-ASSSSAGTASTISGSTGSTATIVPGSSSSVGSSTQSASPSSPGTMST--V 511
Query: 371 SGPLGATTYTTPFVQTVPIASTASLP 448
SGP G+T P T P S++ P
Sbjct: 512 SGPTGSTVTVVPGSSTSPAPSSSPNP 537
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,944,358
Number of Sequences: 27780
Number of extensions: 241069
Number of successful extensions: 982
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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