Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1908
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    23   1.8  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    23   3.1  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    23   3.1  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   4.1  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   4.1  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   4.1  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   4.1  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.1  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.2  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   9.5  

>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = -3

Query: 601 TPFLVDYELTKVPLDEVTNRPGSAPSSETSRADARCHRSHQLFRTDQI*RLCLL*SSEC 425
           +P  + +  TK    ++  + G    S  ++ D+ C   + LFR  Q+  LC    SEC
Sbjct: 35  SPAFLPHHFTKRSFFDIQCK-GVYDKSIFAKLDSICEDCYMLFREPQLHNLC---RSEC 89


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/52 (25%), Positives = 24/52 (46%)
 Frame = -3

Query: 601 TPFLVDYELTKVPLDEVTNRPGSAPSSETSRADARCHRSHQLFRTDQI*RLC 446
           +P  + +  TK    ++  + G    S  ++ D+ C   + LFR  Q+  LC
Sbjct: 35  SPAFLPHHFTKRSFFDIQCK-GVYDKSIFAKLDSICEDCYMLFREPQLHNLC 85


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/52 (25%), Positives = 24/52 (46%)
 Frame = -3

Query: 601 TPFLVDYELTKVPLDEVTNRPGSAPSSETSRADARCHRSHQLFRTDQI*RLC 446
           +P  + +  TK    ++  + G    S  ++ D+ C   + LFR  Q+  LC
Sbjct: 35  SPAFLPHHFTKRSFFDIQCK-GVYDKSIFAKLDSICEDCYMLFREPQLHNLC 85


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 313 TNYQQLNELHEKYHQ 357
           TNY  + E+H K H+
Sbjct: 238 TNYSAVQEMHRKGHE 252


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +2

Query: 326 NSTSYTKSTTRKVYVYWPF 382
           NS    K+   ++Y YW F
Sbjct: 308 NSLRQMKNNLERIYFYWSF 326


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +2

Query: 326 NSTSYTKSTTRKVYVYWPF 382
           NS    K+   ++Y YW F
Sbjct: 308 NSLRQMKNNLERIYFYWSF 326


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +2

Query: 326 NSTSYTKSTTRKVYVYWPF 382
           NS    K+   ++Y YW F
Sbjct: 308 NSLRQMKNNLERIYFYWSF 326


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 415 TPKDILNFTKDRGVKFDLFEKVDVNGD 495
           TP+ +    ++RG+K+    K+DV G+
Sbjct: 51  TPEQLFLAERERGLKYYPIYKLDVCGN 77


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 415 TPKDILNFTKDRGVKFDLFEKVDVNG 492
           TP+ +    ++RG+K+    K+DV G
Sbjct: 51  TPEQMFLADRERGLKYYPIYKLDVCG 76


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 100 PSVQDIPWQRSDHRPPPQYS 41
           P+V  +P+ R  +RP P Y+
Sbjct: 248 PAVPYVPFYRYCYRPYPVYN 267


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,426
Number of Sequences: 336
Number of extensions: 3162
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)