Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1908
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81070-10|CAB03004.1| 163|Caenorhabditis elegans Hypothetical p... 140 9e-34
Z83119-3|CAB05581.1| 163|Caenorhabditis elegans Hypothetical pr... 133 1e-31
AF047660-2|AAQ01522.1| 188|Caenorhabditis elegans Hypothetical ... 122 2e-28
U51994-1|AAA96064.1| 193|Caenorhabditis elegans Hypothetical pr... 106 2e-23
Z81015-7|CAB02659.3| 223|Caenorhabditis elegans Hypothetical pr... 96 2e-20
Z81015-1|CAB02655.1| 224|Caenorhabditis elegans Hypothetical pr... 95 4e-20
AF047660-3|AAC04432.2| 125|Caenorhabditis elegans Hypothetical ... 91 7e-19
AC024876-1|AAF60893.2| 126|Caenorhabditis elegans Hypothetical ... 75 6e-14
AC006644-1|AAF39836.1| 145|Caenorhabditis elegans Hypothetical ... 52 4e-07
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical ... 29 3.1
Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z22177-5|CAA80150.1| 576|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical ... 29 4.1
AF095787-1|AAC64972.1| 563|Caenorhabditis elegans EAT-4 protein. 29 4.1
Z74028-4|CAC70073.1| 143|Caenorhabditis elegans Hypothetical pr... 28 7.2
U13876-2|AAM48539.1| 373|Caenorhabditis elegans Hypothetical pr... 28 7.2
U13876-1|AAM48538.1| 353|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF016448-14|AAB65960.2| 304|Caenorhabditis elegans Hypothetical... 28 7.2
U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical p... 27 9.5
U41534-10|AAK68177.1| 687|Caenorhabditis elegans Hypothetical p... 27 9.5
U41534-9|AAM22029.1| 690|Caenorhabditis elegans Hypothetical pr... 27 9.5
>Z81070-10|CAB03004.1| 163|Caenorhabditis elegans Hypothetical
protein F26E4.12 protein.
Length = 163
Score = 140 bits (339), Expect = 9e-34
Identities = 69/111 (62%), Positives = 81/111 (72%), Gaps = 2/111 (1%)
Frame = +1
Query: 199 TVYEFTVKSINGRDVKLSDYKGNVLLIVNVASQCGLTTTNYQQLNELHEKYHQKGLRILA 378
+VY+F VK+ NG DV LSDYKG VL+IVNVASQCGLT NY QL EL + Y + GL +LA
Sbjct: 3 SVYDFNVKNANGDDVSLSDYKGKVLIIVNVASQCGLTNKNYTQLKELLDVYKKDGLEVLA 62
Query: 379 FPCNQFNGQEPGTPKDILNFTKDRGVKFD--LFEKVDVNGDNAHPLWKFLK 525
FPCNQF GQEP DI F D+ KF+ LF+K+DVNGD PL+KFLK
Sbjct: 63 FPCNQFAGQEPSCEIDIQAFVADK-FKFEPTLFQKIDVNGDKQSPLFKFLK 112
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 539 GTIGDFIKWNFSKFVVDKERRAPSRRYAP 625
G + D IKWNF+KF+V ++ + +R+ P
Sbjct: 117 GFMFDAIKWNFTKFLVGRDGKI-IKRFGP 144
>Z83119-3|CAB05581.1| 163|Caenorhabditis elegans Hypothetical
protein R05H10.5 protein.
Length = 163
Score = 133 bits (321), Expect = 1e-31
Identities = 64/112 (57%), Positives = 80/112 (71%), Gaps = 2/112 (1%)
Frame = +1
Query: 199 TVYEFTVKSINGRDVKLSDYKGNVLLIVNVASQCGLTTTNYQQLNELHEKYHQKGLRILA 378
+V+ TVK+ G D LS+Y+G VL+IVNVASQCGLT +NY Q EL + Y + GL +LA
Sbjct: 3 SVHGITVKNAQGEDTPLSNYQGKVLIIVNVASQCGLTNSNYNQFKELLDVYKKDGLEVLA 62
Query: 379 FPCNQFNGQEPGTPKDILNFTKDRGVKFD--LFEKVDVNGDNAHPLWKFLKK 528
FPCNQF GQEP DI F D+ KF+ LF+K+DVNGDN PL+KFLK+
Sbjct: 63 FPCNQFGGQEPSCEIDIAAFVADK-FKFEPTLFQKIDVNGDNTAPLYKFLKQ 113
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 539 GTIGDFIKWNFSKFVVDKERRAPSRRYAPACQ 634
G + D IKWNF+KF+V ++ +R++P +
Sbjct: 117 GFLVDAIKWNFTKFLVGRDGHV-IKRFSPTTE 147
>AF047660-2|AAQ01522.1| 188|Caenorhabditis elegans Hypothetical
protein T09A12.2b protein.
Length = 188
Score = 122 bits (294), Expect = 2e-28
Identities = 55/111 (49%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Frame = +1
Query: 199 TVYEFTVKSINGRDVKLSDYKGNVLLIVNVASQCGLTTTNYQQLNELHEKYHQKGLRILA 378
T+Y+F K+I+G+ V + Y+ V+L NVAS CG T +NY EL Y +KG R+ A
Sbjct: 30 TIYQFQAKNIDGKMVSMEKYRDKVVLFTNVASYCGYTDSNYNAFKELDGIYREKGFRVAA 89
Query: 379 FPCNQFNGQEPGTPKDILNFTKDRGVKF-DLFEKVDVNGDNAHPLWKFLKK 528
FPCNQF QEP T IL+F K D++ K++VNG N HPLWKFLKK
Sbjct: 90 FPCNQFEKQEPETEGKILDFVKSSYTYAPDMYSKIEVNGQNTHPLWKFLKK 140
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 557 IKWNFSKFVVDKERRAPSR 613
I WNFSKF+VDK R
Sbjct: 150 IPWNFSKFLVDKNGHVVGR 168
>U51994-1|AAA96064.1| 193|Caenorhabditis elegans Hypothetical
protein R03G5.5 protein.
Length = 193
Score = 106 bits (254), Expect = 2e-23
Identities = 57/128 (44%), Positives = 78/128 (60%), Gaps = 5/128 (3%)
Frame = +1
Query: 166 NETPPLHETARTVYEFTVKSINGRDVKLSDYKGNVLLIVNVASQCGLTTTNYQQLNELHE 345
N+ + + T+Y+F+V+ +G V L Y G V++IVNVAS CGLT +NY++L L++
Sbjct: 21 NQRLKIDMSTGTIYDFSVRDNSGDLVSLDKYSGLVVIIVNVASYCGLTNSNYKELKSLND 80
Query: 346 KYHQKGLRILAFPCNQFNGQEPGTPKDILNFTKDR-GVKFDLFEKVDVNG----DNAHPL 510
KYH +GLR+ AFPCNQF Q DI F ++ + DL+ KV VNG PL
Sbjct: 81 KYHLRGLRVAAFPCNQFGFQ----ACDINKFVNEKFSFEPDLYGKVTVNGGPLIGEEEPL 136
Query: 511 WKFLKKAQ 534
W FLKK Q
Sbjct: 137 WTFLKKEQ 144
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +2
Query: 539 GTIGDFIKWNFSKFVVDKERRAPSR 613
GT+ D IKWNF+KF+V+++ + +R
Sbjct: 146 GTLFDAIKWNFTKFLVNRQGKVVAR 170
>Z81015-7|CAB02659.3| 223|Caenorhabditis elegans Hypothetical
protein C11E4.1 protein.
Length = 223
Score = 96.3 bits (229), Expect = 2e-20
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Frame = +1
Query: 187 ETARTVYEFTVKSINGRDVKLSDYKGNVLLIVNVASQCGLTTTNYQQLNELHEKYHQKGL 366
+T +++Y+F V+++ G LS Y+G VLL+VNVA+ C T Y N L EKY +G
Sbjct: 35 DTNQSIYDFQVETLQGEYTDLSQYRGQVLLMVNVATFCAYTQ-QYTDFNPLIEKYQSQGF 93
Query: 367 RILAFPCNQFNGQEPGTPKDILN----FTKDRGVK----FDLFEKVDVNGDNAHPLWKFL 522
++AFPCNQF QEP +++N G K ++ K+D NGDN HP+++F+
Sbjct: 94 TLIAFPCNQFYLQEPAENHELMNGIMYVRPGNGWKPHQNLHIYGKLDTNGDNQHPIYEFV 153
Query: 523 KKA 531
K++
Sbjct: 154 KES 156
>Z81015-1|CAB02655.1| 224|Caenorhabditis elegans Hypothetical
protein C11E4.2 protein.
Length = 224
Score = 95.1 bits (226), Expect = 4e-20
Identities = 47/122 (38%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Frame = +1
Query: 190 TARTVYEFTVKSINGRDVKLSDYKGNVLLIVNVASQCGLTTTNYQQLNELHEKYHQKGLR 369
T +++++F ++++ G LS Y+G V+L+VNVA+ C T Y N + EKY +GL
Sbjct: 37 TNQSIFDFQIETLQGEYTDLSQYRGKVILLVNVATFCAYTQ-QYTDFNPMLEKYQAQGLT 95
Query: 370 ILAFPCNQFNGQEPGTPKDILN-FTKDR-------GVKFDLFEKVDVNGDNAHPLWKFLK 525
++AFPCNQF QEP +++N T R + ++ K+DVNGDN HPL++F+K
Sbjct: 96 LVAFPCNQFYLQEPAENHELMNGLTYVRPGNGWTPHQELHIYGKIDVNGDNHHPLYEFVK 155
Query: 526 KA 531
++
Sbjct: 156 ES 157
>AF047660-3|AAC04432.2| 125|Caenorhabditis elegans Hypothetical
protein T09A12.2a protein.
Length = 125
Score = 91.1 bits (216), Expect = 7e-19
Identities = 43/95 (45%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Frame = +1
Query: 199 TVYEFTVKSINGRDVKLSDYKGNVLLIVNVASQCGLTTTNYQQLNELHEKYHQKGLRILA 378
T+Y+F K+I+G+ V + Y+ V+L NVAS CG T +NY EL Y +KG R+ A
Sbjct: 30 TIYQFQAKNIDGKMVSMEKYRDKVVLFTNVASYCGYTDSNYNAFKELDGIYREKGFRVAA 89
Query: 379 FPCNQFNGQEPGTPKDILNFTKDRGVKF-DLFEKV 480
FPCNQF QEP T IL+F K D++ KV
Sbjct: 90 FPCNQFEKQEPETEGKILDFVKSSYTYAPDMYSKV 124
>AC024876-1|AAF60893.2| 126|Caenorhabditis elegans Hypothetical
protein Y94H6A.4 protein.
Length = 126
Score = 74.5 bits (175), Expect = 6e-14
Identities = 35/82 (42%), Positives = 52/82 (63%)
Frame = +1
Query: 190 TARTVYEFTVKSINGRDVKLSDYKGNVLLIVNVASQCGLTTTNYQQLNELHEKYHQKGLR 369
T ++V++F ++++ G LS Y+G V L+VNVA+ C T Y N + +KY ++GL
Sbjct: 36 TNQSVFDFQIETLKGDYTDLSQYRGKVTLLVNVATFCAYTQ-QYTDFNPILDKYQKQGLV 94
Query: 370 ILAFPCNQFNGQEPGTPKDILN 435
I AFPCNQF QEP ++LN
Sbjct: 95 IAAFPCNQFYLQEPAENHELLN 116
>AC006644-1|AAF39836.1| 145|Caenorhabditis elegans Hypothetical
protein F55A3.5 protein.
Length = 145
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +1
Query: 349 YHQKGLRILAFPCNQFNGQEPGTPKDILNFTKDRGVKFDLFEKVDVNGDNAHPLWKFLKK 528
+H IL FPCNQ N +E D+ F K + +++K+DVNG N PL+K LKK
Sbjct: 26 FHDCSFEILVFPCNQSNNEESSWESDLPYFFK---YQPKIYQKIDVNGVNTDPLYKLLKK 82
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical
protein C05A9.1 protein.
Length = 1283
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Frame = +1
Query: 232 GRDVKLSDYKGNVLL--IVNVASQCGLTTTNYQQLNELHEKYHQKGLRILAFPCNQFN-- 399
G V++ D+K + + + N Q L +TNY+++NE E+ ++ FP N+ +
Sbjct: 617 GEIVEVGDHKQLIAMNGVYNNLVQTQLMSTNYEKMNENEERVTRQSSH-SDFPSNEISHQ 675
Query: 400 --GQEPGTPKDILNFTKDRGVK 459
QE K ++ K+ G K
Sbjct: 676 KIDQEDDYVKKLIAEIKEEGAK 697
>AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical
protein T20H9.6 protein.
Length = 758
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/79 (22%), Positives = 32/79 (40%)
Frame = +1
Query: 166 NETPPLHETARTVYEFTVKSINGRDVKLSDYKGNVLLIVNVASQCGLTTTNYQQLNELHE 345
N P L+ T+ E++ S LS + N+ ++ +A L + +QL+ +
Sbjct: 253 NSFPLLYPVYETIQEYSKISETLETTILSGIQKNIDNVIKIAKSAKLNAESVEQLSNMLL 312
Query: 346 KYHQKGLRILAFPCNQFNG 402
H K + FNG
Sbjct: 313 SRHSKSTKASKHITGFFNG 331
>Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical protein
F54F11.2 protein.
Length = 1589
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +1
Query: 265 NVLLIVNVASQCGLTTTNYQQLN--ELHEKYHQKGLRILAFPCNQFNGQEPGTPKDILNF 438
NV +NV + +T+TN ++N ++ Y+ K + PC+ F G ++F
Sbjct: 845 NVKTDINVVPEAPITSTNVDKMNAYQMAVDYYAKSVNTAIDPCDDFYSYACGNFNQSVSF 904
>Z22177-5|CAA80150.1| 576|Caenorhabditis elegans Hypothetical
protein ZK512.6 protein.
Length = 576
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +2
Query: 17 VSNTRSTCRVLWWRTVVTSLP-WNIL 91
VSNT T R + W+ +VTS P W I+
Sbjct: 286 VSNTHPTIRSIPWKAIVTSKPVWAII 311
>AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical
protein F52C12.4 protein.
Length = 1635
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 589 VDYELTKVPLDEVTNRPGSAP 527
VDY++T PLD V N P P
Sbjct: 1099 VDYQITSYPLDSVENSPKMTP 1119
>AF095787-1|AAC64972.1| 563|Caenorhabditis elegans EAT-4 protein.
Length = 563
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +2
Query: 17 VSNTRSTCRVLWWRTVVTSLP-WNIL 91
VSNT T R + W+ +VTS P W I+
Sbjct: 273 VSNTHPTIRSIPWKAIVTSKPVWAII 298
>Z74028-4|CAC70073.1| 143|Caenorhabditis elegans Hypothetical
protein C14C10.7 protein.
Length = 143
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -3
Query: 673 KFWAKFLFPDPSGLTCGGVSSRRGTPFLVDYELTKVPLDEV 551
K W + PDP L G S+ G+ FL + P+D V
Sbjct: 45 KLWDEDSGPDPDDLLDQGYSTSNGSFFLSGWTTETTPIDPV 85
>U13876-2|AAM48539.1| 373|Caenorhabditis elegans Hypothetical
protein F57B9.7b protein.
Length = 373
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 102 QRHHTSCD*ISKILEVRKTRI*RNAASPRDRENSIRIYS*INK--RTRRQAVRLQRERAP 275
+R+ ++ D K L+ KT++ + RD+EN++ NK ++R + +R+QR P
Sbjct: 313 KRYKSNADVAEKELDELKTQMRQTKKELRDKENALDEQKETNKHLQSRLEKMRMQRTGRP 372
>U13876-1|AAM48538.1| 353|Caenorhabditis elegans Hypothetical
protein F57B9.7a protein.
Length = 353
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 102 QRHHTSCD*ISKILEVRKTRI*RNAASPRDRENSIRIYS*INK--RTRRQAVRLQRERAP 275
+R+ ++ D K L+ KT++ + RD+EN++ NK ++R + +R+QR P
Sbjct: 293 KRYKSNADVAEKELDELKTQMRQTKKELRDKENALDEQKETNKHLQSRLEKMRMQRTGRP 352
>AF016448-14|AAB65960.2| 304|Caenorhabditis elegans Hypothetical
protein F41E6.12 protein.
Length = 304
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 628 CGGVSSRRGTPFLVDYELTKVPLDEVTNRPGSAPSSETS 512
CGG +S GTP V + + L +T P S +S T+
Sbjct: 40 CGGSASASGTPVQVASSVVPLILPPMTTLPPSTTTSTTA 78
>U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical
protein C16A3.1b protein.
Length = 686
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +2
Query: 545 IGDFIKWNFSKF---VVDKERRAPSRRYAPACQS 637
IGD IK F F V+D ++ PSR Y PA +S
Sbjct: 104 IGDRIKIEFYPFHSAVIDLIKQVPSRNYDPAKRS 137
>U41534-10|AAK68177.1| 687|Caenorhabditis elegans Hypothetical
protein C16A3.1a protein.
Length = 687
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +2
Query: 545 IGDFIKWNFSKF---VVDKERRAPSRRYAPACQS 637
IGD IK F F V+D ++ PSR Y PA +S
Sbjct: 105 IGDRIKIEFYPFHSAVIDLIKQVPSRNYDPAKRS 138
>U41534-9|AAM22029.1| 690|Caenorhabditis elegans Hypothetical
protein C16A3.1c protein.
Length = 690
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +2
Query: 545 IGDFIKWNFSKF---VVDKERRAPSRRYAPACQS 637
IGD IK F F V+D ++ PSR Y PA +S
Sbjct: 108 IGDRIKIEFYPFHSAVIDLIKQVPSRNYDPAKRS 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,657,601
Number of Sequences: 27780
Number of extensions: 305515
Number of successful extensions: 1037
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -