Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1908
(687 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g11600.1 68417.m01858 glutathione peroxidase, putative 142 2e-34
At2g31570.1 68415.m03857 glutathione peroxidase, putative 142 2e-34
At4g31870.1 68417.m04528 glutathione peroxidase, putative glutat... 137 7e-33
At2g25080.1 68415.m03001 phospholipid hydroperoxide glutathione ... 135 3e-32
At1g63460.1 68414.m07176 glutathione peroxidase, putative contai... 134 4e-32
At2g48150.1 68415.m06027 glutathione peroxidase, putative 130 8e-31
At3g63080.1 68416.m07085 glutathione peroxidase, putative phosph... 127 8e-30
At2g43350.1 68415.m05390 glutathione peroxidase, putative 122 3e-28
At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to pe... 31 0.95
At1g09170.1 68414.m01024 kinesin motor protein-related similar t... 30 1.3
At1g68350.1 68414.m07807 hypothetical protein 29 2.2
At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a '... 29 2.9
At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a '... 29 2.9
At2g26660.1 68415.m03198 SPX (SYG1/Pho81/XPR1) domain-containing... 28 6.7
At1g78660.3 68414.m09168 gamma-glutamyl hydrolase, putative / ga... 28 6.7
At1g78660.2 68414.m09169 gamma-glutamyl hydrolase, putative / ga... 28 6.7
At1g78660.1 68414.m09167 gamma-glutamyl hydrolase, putative / ga... 28 6.7
At5g60120.1 68418.m07537 AP2 domain-containing transcription fac... 27 8.8
At3g03140.1 68416.m00310 expressed protein 27 8.8
At2g40130.2 68415.m04936 heat shock protein-related contains sim... 27 8.8
At1g75640.1 68414.m08788 leucine-rich repeat family protein / pr... 27 8.8
At1g15180.1 68414.m01815 MATE efflux family protein contains Pfa... 27 8.8
>At4g11600.1 68417.m01858 glutathione peroxidase, putative
Length = 232
Score = 142 bits (344), Expect = 2e-34
Identities = 66/114 (57%), Positives = 85/114 (74%), Gaps = 1/114 (0%)
Frame = +1
Query: 196 RTVYEFTVKSINGRDVKLSDYKGNVLLIVNVASQCGLTTTNYQQLNELHEKYHQKGLRIL 375
+++Y+FTVK G DV LS YKG VLLIVNVASQCGLT +NY +L +L+EKY G IL
Sbjct: 71 KSLYDFTVKDAKGNDVDLSIYKGKVLLIVNVASQCGLTNSNYTELAQLYEKYKGHGFEIL 130
Query: 376 AFPCNQFNGQEPGTPKDILNFTKDR-GVKFDLFEKVDVNGDNAHPLWKFLKKAQ 534
AFPCNQF QEPGT ++I+ F R ++ +F+KVDVNGD A P++KFLK ++
Sbjct: 131 AFPCNQFGNQEPGTNEEIVQFACTRFKAEYPIFDKVDVNGDKAAPVYKFLKSSK 184
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 539 GTIGDFIKWNFSKFVVDKERRAPSRRYAP 625
G GD IKWNF+KF+VDK+ R+AP
Sbjct: 186 GLFGDGIKWNFAKFLVDKDGNVVD-RFAP 213
>At2g31570.1 68415.m03857 glutathione peroxidase, putative
Length = 169
Score = 142 bits (344), Expect = 2e-34
Identities = 65/114 (57%), Positives = 84/114 (73%), Gaps = 1/114 (0%)
Frame = +1
Query: 187 ETARTVYEFTVKSINGRDVKLSDYKGNVLLIVNVASQCGLTTTNYQQLNELHEKYHQKGL 366
E+ +++Y+FTVK I G DV L YKG LL+VNVAS+CGLT NY++LN L+EKY ++GL
Sbjct: 4 ESPKSIYDFTVKDIGGNDVSLDQYKGKTLLVVNVASKCGLTDANYKELNVLYEKYKEQGL 63
Query: 367 RILAFPCNQFNGQEPGTPKDILNFTKDR-GVKFDLFEKVDVNGDNAHPLWKFLK 525
ILAFPCNQF GQEPG ++I R +F +F+KVDVNG N PL+K+LK
Sbjct: 64 EILAFPCNQFLGQEPGNNEEIQQTVCTRFKAEFPIFDKVDVNGKNTAPLYKYLK 117
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 539 GTIGDFIKWNFSKFVVDKERRAPSRRYAP 625
G + D IKWNF+KF+V + + +RY+P
Sbjct: 122 GLLIDAIKWNFTKFLVSPDGKV-LQRYSP 149
>At4g31870.1 68417.m04528 glutathione peroxidase, putative
glutathione peroxidase, Arabidopsis thaliana,
PIR2:S71250
Length = 233
Score = 137 bits (331), Expect = 7e-33
Identities = 62/111 (55%), Positives = 84/111 (75%), Gaps = 1/111 (0%)
Frame = +1
Query: 196 RTVYEFTVKSINGRDVKLSDYKGNVLLIVNVASQCGLTTTNYQQLNELHEKYHQKGLRIL 375
++V++FTVK I+G DV L +KG LLIVNVAS+CGLT++NY +L++L+EKY +G IL
Sbjct: 74 KSVHDFTVKDIDGNDVSLDKFKGKPLLIVNVASRCGLTSSNYSELSQLYEKYKNQGFEIL 133
Query: 376 AFPCNQFNGQEPGTPKDILNFTKDR-GVKFDLFEKVDVNGDNAHPLWKFLK 525
AFPCNQF GQEPG+ +I F R +F +F+KVDVNG + P++KFLK
Sbjct: 134 AFPCNQFGGQEPGSNPEIKQFACTRFKAEFPIFDKVDVNGPSTAPIYKFLK 184
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 539 GTIGDFIKWNFSKFVVDKERRAPSRRYAP 625
G +GD IKWNF KF+VDK+ + RY P
Sbjct: 189 GFLGDIIKWNFEKFLVDKKGKV-VERYPP 216
>At2g25080.1 68415.m03001 phospholipid hydroperoxide glutathione
peroxidase, chloroplast / PHGPx (GPX1) identical to
SP|P52032 Phospholipid hydroperoxide glutathione
peroxidase, chloroplast precursor (EC 1.11.1.9) (PHGPx)
{Arabidopsis thaliana}; contains Glutathione peroxidases
signatures, Glutathione_Peroxid_1 [GKVMLIVNVASRCGLT],
Glutathione_Peroxid_2 [LAFPCNQF]; contains EST
GB:T43669, N38679, R30227, H37043, AA042773; identical
to cDNA chloroplast mRNA for glutathione peroxidase
GI:2274856
Length = 236
Score = 135 bits (326), Expect = 3e-32
Identities = 61/111 (54%), Positives = 85/111 (76%), Gaps = 1/111 (0%)
Frame = +1
Query: 196 RTVYEFTVKSINGRDVKLSDYKGNVLLIVNVASQCGLTTTNYQQLNELHEKYHQKGLRIL 375
+TV++FTVK I+G+DV L+ +KG V+LIVNVAS+CGLT++NY +L+ L+EKY +G IL
Sbjct: 77 KTVHDFTVKDIDGKDVALNKFKGKVMLIVNVASRCGLTSSNYSELSHLYEKYKTQGFEIL 136
Query: 376 AFPCNQFNGQEPGTPKDILNFTKDR-GVKFDLFEKVDVNGDNAHPLWKFLK 525
AFPCNQF QEPG+ +I F R +F +F+KVDVNG + P+++FLK
Sbjct: 137 AFPCNQFGFQEPGSNSEIKQFACTRFKAEFPIFDKVDVNGPSTAPIYEFLK 187
Score = 34.3 bits (75), Expect = 0.077
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 539 GTIGDFIKWNFSKFVVDKERRAPSRRYAP 625
G +G IKWNF KF++DK+ + RY P
Sbjct: 192 GFLGGLIKWNFEKFLIDKKGKV-VERYPP 219
>At1g63460.1 68414.m07176 glutathione peroxidase, putative contains
Pfam profile: PF00255 glutathione peroxidases
Length = 167
Score = 134 bits (325), Expect = 4e-32
Identities = 61/113 (53%), Positives = 82/113 (72%), Gaps = 1/113 (0%)
Frame = +1
Query: 199 TVYEFTVKSINGRDVKLSDYKGNVLLIVNVASQCGLTTTNYQQLNELHEKYHQKGLRILA 378
+VYE +++ G ++ LS YK VLLIVNVAS+CG+T +NY +LNEL+ +Y KGL ILA
Sbjct: 8 SVYELSIEDAKGNNLALSQYKDKVLLIVNVASKCGMTNSNYTELNELYNRYKDKGLEILA 67
Query: 379 FPCNQFNGQEPGTPKDILNFTKDR-GVKFDLFEKVDVNGDNAHPLWKFLKKAQ 534
FPCNQF +EPGT I +F R +F +F K++VNG+NA PL+KFLKK +
Sbjct: 68 FPCNQFGDEEPGTNDQITDFVCTRFKSEFPIFNKIEVNGENASPLYKFLKKGK 120
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 539 GTIGDFIKWNFSKFVVDKERRAPSRRY 619
G GD I+WNF+KF+VDK +A R Y
Sbjct: 122 GIFGDDIQWNFAKFLVDKNGQAVQRYY 148
>At2g48150.1 68415.m06027 glutathione peroxidase, putative
Length = 170
Score = 130 bits (314), Expect = 8e-31
Identities = 61/114 (53%), Positives = 83/114 (72%), Gaps = 1/114 (0%)
Frame = +1
Query: 196 RTVYEFTVKSINGRDVKLSDYKGNVLLIVNVASQCGLTTTNYQQLNELHEKYHQKGLRIL 375
R+V++FTVK +G+D+ +S Y+G VLLIVNVAS+CG T TNY QL EL+ KY + IL
Sbjct: 10 RSVHQFTVKDSSGKDLNMSIYQGKVLLIVNVASKCGFTETNYTQLTELYRKYKDQDFEIL 69
Query: 376 AFPCNQFNGQEPGTPKDILNFTKDR-GVKFDLFEKVDVNGDNAHPLWKFLKKAQ 534
AFPCNQF QEPGT ++ F +R ++ +F+KV VNG NA P++KFLK ++
Sbjct: 70 AFPCNQFLYQEPGTSQEAHEFACERFKAEYPVFQKVRVNGQNAAPIYKFLKASK 123
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 545 IGDFIKWNFSKFVVDKE 595
+G IKWNF+KF+V K+
Sbjct: 127 LGSRIKWNFTKFLVGKD 143
>At3g63080.1 68416.m07085 glutathione peroxidase, putative
phospholipid-hydroperoxide glutathione peroxidase,
spinach, PIR:JC5619
Length = 173
Score = 127 bits (306), Expect = 8e-30
Identities = 58/111 (52%), Positives = 81/111 (72%), Gaps = 1/111 (0%)
Frame = +1
Query: 196 RTVYEFTVKSINGRDVKLSDYKGNVLLIVNVASQCGLTTTNYQQLNELHEKYHQKGLRIL 375
+++++FTVK +G++V LS Y+G VLL+VNVAS+CG T +NY QL EL+ KY +G +L
Sbjct: 12 KSIHQFTVKDSSGKEVDLSVYQGKVLLVVNVASKCGFTESNYTQLTELYRKYKDQGFVVL 71
Query: 376 AFPCNQFNGQEPGTPKDILNFTKDR-GVKFDLFEKVDVNGDNAHPLWKFLK 525
AFPCNQF QEPGT ++ F R ++ +F+KV VNG NA P++KFLK
Sbjct: 72 AFPCNQFLSQEPGTSEEAHQFACTRFKAEYPVFQKVRVNGQNAAPVYKFLK 122
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 545 IGDFIKWNFSKFVVDKERRAPSR 613
+G IKWNF+KF+V K+ + R
Sbjct: 129 LGSRIKWNFTKFLVGKDGQVIDR 151
>At2g43350.1 68415.m05390 glutathione peroxidase, putative
Length = 206
Score = 122 bits (293), Expect = 3e-28
Identities = 56/117 (47%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
Frame = +1
Query: 181 LHETARTVYEFTVKSINGRDVKLSDYKGNVLLIVNVASQCGLTTTNYQQLNELHEKYHQK 360
+ +++ ++Y +VK I G+DV LS + G VLLIVNVAS+CGLT NY+++N L+ KY +
Sbjct: 41 VEQSSTSIYNISVKDIEGKDVSLSKFTGKVLLIVNVASKCGLTHGNYKEMNILYAKYKTQ 100
Query: 361 GLRILAFPCNQFNGQEPGTPKDILNFTKD-RGVKFDLFEKVDVNGDNAHPLWKFLKK 528
G ILAFPCNQF QEPG+ +I + +F +F+K++VNG N PL+ FLK+
Sbjct: 101 GFEILAFPCNQFGSQEPGSNMEIKETVCNIFKAEFPIFDKIEVNGKNTCPLYNFLKE 157
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 539 GTIGDFIKWNFSKFVVDKERRAPSRRYAP 625
G GD IKWNF+KF+VD++ RYAP
Sbjct: 161 GLFGDAIKWNFAKFLVDRQGNVVD-RYAP 188
>At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to
peroxiredoxin Q [Sedum lineare] GI:6899842; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 216
Score = 30.7 bits (66), Expect = 0.95
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 208 EFTVKSINGRDVKLSDYKGN-VLLIVNVASQCGLTTTNYQQLNELHEKYHQKGLRIL 375
+FT+K NG+ V L YKG V+L A + T + +EK+ + G ++
Sbjct: 77 DFTLKDQNGKPVSLKKYKGKPVVLYFYPADETPGCTKQACAFRDSYEKFKKAGAEVI 133
>At1g09170.1 68414.m01024 kinesin motor protein-related similar to
GB:AAB61066
Length = 1010
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 574 TKVPLDEVTNRPGSAPSSETSRAD 503
++VP+D VTN P S PSSE D
Sbjct: 208 SEVPVDAVTNSPSSTPSSEQPLLD 231
>At1g68350.1 68414.m07807 hypothetical protein
Length = 162
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/49 (28%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Frame = -1
Query: 582 TNLLKFHLMKSPIVPALRLL---QKLPERMRVVTVH-INFFEQIKFNAS 448
+ LLK +++ PI+P L+L+ Q+ +R++++ H F ++ +F+ S
Sbjct: 13 SKLLKISILRRPIIPRLKLIPIKQRRSKRVKLLQQHNYKFLQEYQFSPS 61
>At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +3
Query: 261 RERAPHRQCSLSVRPYDHQLSTTQRATRKVPPERSTYTGLSVQPVQ 398
R APH S RP T T VPP+ TY+ +S+Q Q
Sbjct: 1934 RSPAPHLN---SYRPSSSTPVATATPTSSVPPQALTYSAVSIQQQQ 1976
>At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +3
Query: 261 RERAPHRQCSLSVRPYDHQLSTTQRATRKVPPERSTYTGLSVQPVQ 398
R APH S RP T T VPP+ TY+ +S+Q Q
Sbjct: 1934 RSPAPHLN---SYRPSSSTPVATATPTSSVPPQALTYSAVSIQQQQ 1976
>At2g26660.1 68415.m03198 SPX (SYG1/Pho81/XPR1) domain-containing
protein low similarity to NUC-2 [Neurospora crassa]
GI:1399532, xenotropic and polytropic murine leukemia
virus receptor [Mus musculus castaneus] GI:6093320;
contains Pfam profile PF03105: SPX domain
Length = 287
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +1
Query: 244 KLSDYKGNVLLIVNVASQCGLTTTNYQQLNELHEKYHQKGLRILAFPCNQFNGQEPGTPK 423
++ D+ G ++L++N ++ NY L ++ +KY ++ ++ P Q QEP
Sbjct: 119 EIVDFHGEMVLLMNYSA------LNYTGLAKILKKYDKRTGALIRLPFIQKVLQEPFFTT 172
Query: 424 DILN-FTKD 447
D+LN F K+
Sbjct: 173 DLLNTFVKE 181
>At1g78660.3 68414.m09168 gamma-glutamyl hydrolase, putative /
gamma-Glu-X carboxypeptidase, putative / conjugase,
putative similar to SP|O65355 Gamma-glutamyl hydrolase
precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase)
(Conjugase) (GH) {Arabidopsis thaliana}
Length = 348
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -1
Query: 663 PNSFSQIQVD*HAGAYLLDGARRSLS 586
P+S IQV HA +YL+ AR+SL+
Sbjct: 283 PHSEDAIQVTQHAASYLVSEARKSLN 308
>At1g78660.2 68414.m09169 gamma-glutamyl hydrolase, putative /
gamma-Glu-X carboxypeptidase, putative / conjugase,
putative similar to SP|O65355 Gamma-glutamyl hydrolase
precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase)
(Conjugase) (GH) {Arabidopsis thaliana}
Length = 347
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -1
Query: 663 PNSFSQIQVD*HAGAYLLDGARRSLS 586
P+S IQV HA +YL+ AR+SL+
Sbjct: 282 PHSEDAIQVTQHAASYLVSEARKSLN 307
>At1g78660.1 68414.m09167 gamma-glutamyl hydrolase, putative /
gamma-Glu-X carboxypeptidase, putative / conjugase,
putative similar to SP|O65355 Gamma-glutamyl hydrolase
precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase)
(Conjugase) (GH) {Arabidopsis thaliana}
Length = 348
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -1
Query: 663 PNSFSQIQVD*HAGAYLLDGARRSLS 586
P+S IQV HA +YL+ AR+SL+
Sbjct: 283 PHSEDAIQVTQHAASYLVSEARKSLN 308
>At5g60120.1 68418.m07537 AP2 domain-containing transcription
factor, putative Similar to Floral homeotic protein
APETALA2 protein (SP:P47927) [Arabidopsis thaliana];
homolog HAP2, Hyacinthus orientalis, EMBL:AF134116
Length = 485
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -2
Query: 113 VMSLAISSGYSMAAK*PPSSTTV 45
+ S A SSG+S++A PPSST +
Sbjct: 424 LFSNAASSGFSLSATRPPSSTAI 446
>At3g03140.1 68416.m00310 expressed protein
Length = 769
Score = 27.5 bits (58), Expect = 8.8
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Frame = +1
Query: 1 PDTALSFKYKKYLQSTVVEDGGHFAAMEYP-ELMAKDITQA-VIXXXXXXXXXXXXSNET 174
PDT SFKY S+ G H +ME P + K+ T++ SN+
Sbjct: 214 PDT--SFKYLARSNSSASSSGDH--SMERPIYTLGKEKTKSRAEAKRTKYMFTPSESNDV 269
Query: 175 PPLHETARTVYEFTVKSINGRDVKLSDY 258
LHE + + S G D + SDY
Sbjct: 270 SDLHENLLSHRDAMHSSFAGGDTRYSDY 297
>At2g40130.2 68415.m04936 heat shock protein-related contains
similarity to 101 kDa heat shock protein; HSP101
[Triticum aestivum] gi|11561808|gb|AAC83689
Length = 910
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 229 NGRDVKLSDYKGNVLLIVNVASQCGLTTTNYQQLNELHEKYHQKGLRI 372
+GR+V + GN + ++ +SQ TTT+Y + L K Q +RI
Sbjct: 675 HGREVGI----GNTIFVMTSSSQGSATTTSYSEEKLLRVKGRQVEIRI 718
>At1g75640.1 68414.m08788 leucine-rich repeat family protein /
protein kinase family protein contains protein kinase
domain, Pfam:PF00069; contains leucine-rich repeats,
Pfam:PF00560
Length = 1140
Score = 27.5 bits (58), Expect = 8.8
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +1
Query: 238 DVKLSDYKGNVLLIV-NVASQCGLTTTNYQQLNELHEKYHQ-KGLRILAFPCNQFNGQEP 411
D+ + + G V V N+ + L N + E+ K LR++ F N+F+GQ P
Sbjct: 344 DISGNGFSGGVTAKVGNLMALQELRVANNSLVGEIPTSIRNCKSLRVVDFEGNKFSGQIP 403
Query: 412 GTPKDILNFT 441
G + + T
Sbjct: 404 GFLSQLRSLT 413
>At1g15180.1 68414.m01815 MATE efflux family protein contains Pfam
profile PF01554: Uncharacterized membrane protein family
Length = 482
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -2
Query: 497 LSPFTSTFSNRSNLTPLSFVK-FRMSLGVPGSWPLNWLHGKASI 369
L P T F N+S +TPL F L VP W L + G ++
Sbjct: 172 LQPLTRYFQNQSMITPLLITSCFVFCLHVPLCWLLVYKSGLGNL 215
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,676,854
Number of Sequences: 28952
Number of extensions: 280358
Number of successful extensions: 904
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1457719448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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