Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1905
         (434 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   2.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   2.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   2.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   2.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   2.9  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    21   3.8  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   5.1  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   6.7  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    20   8.9  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -3

Query: 111 MH*SCCNLWAYFLIKFILHVTIALI-NQNHNSLI 13
           +H   C L+A FLI   L   +AL  N+N + ++
Sbjct: 431 IHSKLCKLYATFLIALKLVWIVALFKNENLSEMV 464


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +2

Query: 215 FFYKYITLIFLLRMCF 262
           F+Y  I ++F + +CF
Sbjct: 947 FYYNIIPILFFMLVCF 962


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +2

Query: 215 FFYKYITLIFLLRMCF 262
           F+Y  I ++F + +CF
Sbjct: 947 FYYNIIPILFFMLVCF 962


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +2

Query: 215 FFYKYITLIFLLRMCF 262
           F+Y  I ++F + +CF
Sbjct: 947 FYYNIIPILFFMLVCF 962


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +2

Query: 215 FFYKYITLIFLLRMCF 262
           F+Y  I ++F + +CF
Sbjct: 947 FYYNIIPILFFMLVCF 962


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 128 IRVSDRCIRVVAICGRISSLNSYYTS 51
           ++  DR +R   IC     LNS Y+S
Sbjct: 90  LKSPDRFVRQFTICFDDVDLNSLYSS 115


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -1

Query: 131 WIRVSDRCIRVVAICGRISSL 69
           ++ +S RC ++ AIC  +S++
Sbjct: 34  FVIISPRCDKISAICFLLSTI 54


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 308 LKKPNNELYFSGNS 267
           +++PNNE Y  G S
Sbjct: 151 VQEPNNEFYAMGRS 164


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 150 NFHIKYLDSSFRQMH*SCCNLWAYFLIKFIL 58
           NF   YL S F       C+L+   ++K IL
Sbjct: 36  NFVKTYLVSDFENYVTFFCSLFIVVILKLIL 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,260
Number of Sequences: 336
Number of extensions: 2211
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)