Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1902
         (531 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    65   4e-13
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    26   0.18 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.7  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    23   2.2  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   3.9  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   3.9  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   3.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   5.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.1  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    21   5.1  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   6.8  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   6.8  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   6.8  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.9  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 64.9 bits (151), Expect = 4e-13
 Identities = 36/115 (31%), Positives = 58/115 (50%)
 Frame = +2

Query: 185 KKKNSEKRLYVDYRALNRKPKKEHYPLPRVEDQLDLLSGNTLFTSLDLASGYYQTPVAEA 364
           KKK+   R+ +D R +N K   +    P  ++ L         +++DL S Y+Q P++  
Sbjct: 349 KKKDGTVRICLDARMINSKMIADCESPPAADELLRRFHEIRYMSTIDLRSSYWQIPLSPE 408

Query: 365 SRSKTAFVTLDGQYEYNRMPFGLVNAPSVFQRTIHKILKGAPIKYAVVYMDDILI 529
           SR  TAF+     Y Y  +PFGL  A   F R +  +L     ++ V Y+DD+L+
Sbjct: 409 SRQYTAFLYNGRSYTYQVLPFGLKTAVGSFSRAMDVVLGTEVREFVVNYIDDLLV 463



 Score = 38.3 bits (85), Expect = 4e-05
 Identities = 21/64 (32%), Positives = 34/64 (53%)
 Frame = +1

Query: 4   GFTNITEMVIDLNDTEPVVYRPCRMSHTERQLVRDMVKEMVDNGRARESSSSYASPIVLV 183
           G T+     I L+D  P + RP  +    R  V   ++EM+D G  +  +S YASP+ + 
Sbjct: 289 GLTHKYTHEIKLHDKTPFLKRPYPVPFALRPAVDATIQEMLDLGVIKREASPYASPMTVG 348

Query: 184 QKKE 195
           +KK+
Sbjct: 349 KKKD 352


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 26.2 bits (55), Expect = 0.18
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 351 QSPRPPVVKLPL*HLMGSMNTTACLSD*LMHHLCSK 458
           ++P  P V  P   + GS+    C  D + H LC K
Sbjct: 455 EAPPAPAVSNPQNEVDGSVAPKECKQDFMPHELCDK 490


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 474 ILWIVLWNTDGALTS 430
           ILW++ W  D AL S
Sbjct: 56  ILWVIYWLQDDALKS 70


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 339 YPEARSNDVNRVLPDNRS 286
           +PE    D NR LP+N++
Sbjct: 99  FPEPEKFDPNRYLPENQA 116


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 89  SVCDIRHGRYTTGSVSLRSITI 24
           S CD+  G    GS S ++IT+
Sbjct: 441 SYCDVISGNAENGSCSGKTITV 462


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 89  SVCDIRHGRYTTGSVSLRSITI 24
           S CD+  G    GS S ++IT+
Sbjct: 442 SYCDVISGNAENGSCSGKTITV 463


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 89  SVCDIRHGRYTTGSVSLRSITI 24
           S CD+  G    GS S ++IT+
Sbjct: 442 SYCDVISGNAENGSCSGKTITV 463


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -1

Query: 462 VLWNTDGALTSPKGMRLYSYCPSSVTKAVL 373
           +LWN +     PKG   Y+     +   VL
Sbjct: 828 ILWNINNKRLEPKGDNRYTIREEILANGVL 857


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = -2

Query: 485  PLLIFYGLSF 456
            PLL+F+GL+F
Sbjct: 1325 PLLLFFGLNF 1334


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 339 YPEARSNDVNRVLPDN 292
           YPE    D +R LP+N
Sbjct: 101 YPEPEKFDPDRFLPEN 116


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -2

Query: 260 GSVPFWAFCLELDSPH 213
           G VP W + L    PH
Sbjct: 324 GRVPIWPYTLYFRMPH 339


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -2

Query: 260 GSVPFWAFCLELDSPH 213
           G VP W + L    PH
Sbjct: 331 GRVPIWPYTLYFRMPH 346


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 218 DYRALNRKPKKEHYPLPRVE 277
           D+    R PK+  YP P  E
Sbjct: 239 DFYTPKRNPKEADYPAPLYE 258


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 395 DGQYEYNRMPFGL 433
           D  YE NR P GL
Sbjct: 410 DRHYEENRAPLGL 422


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,634
Number of Sequences: 336
Number of extensions: 3207
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)