Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1902
         (531 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    27   0.39 
AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    26   0.68 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   4.8  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   4.8  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   6.4  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    23   8.4  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 27.1 bits (57), Expect = 0.39
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 404 YEYNRMPFGLVNAPSVFQRTIHKILKGAPIKY 499
           YE N + +G  +AP +  RT++++L+    KY
Sbjct: 825 YELNTITYGTASAPFLAIRTLNQVLEDNKEKY 856


>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 26.2 bits (55), Expect = 0.68
 Identities = 18/74 (24%), Positives = 30/74 (40%)
 Frame = +3

Query: 159 ICQSYSPGTKKRIVRNDCMWTIEL*TESPKRNTTPYQESRISWTYYPVTPYLRHWTLLPG 338
           I  +YSP   +++ RN+  W I    +S     T  +    S T   VT +   W  +  
Sbjct: 99  IIMTYSPSDIEKVFRNEGQWPIRRGFDSFTYYRTHVRPDIFSETGGLVTEHGEKWQKVRT 158

Query: 339 TIKHQSPRPPVVKL 380
            +     +P  +KL
Sbjct: 159 IVNPVMMQPKTIKL 172


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +1

Query: 88   ERQLVRDMVKEM-VDNGRARESSSSYASPIVLVQKKE 195
            E   +R+ ++EM +   +A E SSS    IV +QK+E
Sbjct: 964  EANKLREELEEMKLAIEKAHEGSSSIKKEIVALQKRE 1000


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -2

Query: 383  RQFYYGRPRRLVFDSTRKQGPMT*IGCYRIIGPT 282
            RQ  Y  P   + D+T +    T   C RI G T
Sbjct: 1305 RQHEYAVPSNCLLDTTHETYNTTATSCERIAGET 1338


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +1

Query: 7    FTNITEMVIDLNDTEPVVYRP--CRMSHTERQLVRDMVKEM 123
            F +I   V+D ND  PV+ +P  C M  TE   + D + ++
Sbjct: 1154 FKHILIHVLDDNDNVPVIQKPSGCSMI-TEYHNINDPIVKL 1193


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 282 SWTYYPVTPYLRHWTLLPGT 341
           SWTY      LRH   +PG+
Sbjct: 174 SWTYNGAQVELRHLDQIPGS 193


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,449
Number of Sequences: 2352
Number of extensions: 12995
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49051644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)