Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1901
         (673 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF310159-1|AAG41424.1| 3479|Drosophila melanogaster fry protein.      108   6e-24
AE014296-1700|AAF50228.2| 3479|Drosophila melanogaster CG32045-P...   108   6e-24
AF351187-1|AAK37558.1| 1629|Drosophila melanogaster furry protei...    47   3e-05
AE014296-1705|ABI31247.1| 1629|Drosophila melanogaster CG32045-P...    47   3e-05
AY069603-1|AAL39748.2| 1876|Drosophila melanogaster LD36178p pro...    30   2.5  
AF172995-1|AAD48498.1| 1847|Drosophila melanogaster gigas protei...    30   2.5  
AE014296-3279|AAF49066.1| 1847|Drosophila melanogaster CG6975-PA...    30   2.5  

>AF310159-1|AAG41424.1| 3479|Drosophila melanogaster fry protein.
          Length = 3479

 Score =  108 bits (260), Expect = 6e-24
 Identities = 63/119 (52%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
 Frame = -1

Query: 619  PEPRVHESALQLLQLLDKRFFGS-VGPLPTDEDNGSEKGRGTLDALLCTTYCXXXXXXXX 443
            P   VH +ALQLLQ+LDKRFFGS VG L +D D   +K  GTLD LL + YC        
Sbjct: 1590 PRVEVHATALQLLQILDKRFFGSVVGTLHSDSDKEDDK-VGTLDVLLSSAYCRSQRFLSK 1648

Query: 442  XXXXLHPELTMPMFSEITARFQTARTEVRQXXXXXXXXXLVNIELVDPNVPPANPLSYI 266
                L PELTM +FSEIT RFQ+AR +VR          L N+ELV  +VPPA PLSYI
Sbjct: 1649 QLAQLRPELTMSIFSEITHRFQSAREDVRALLLQCLLPWLQNMELVATSVPPATPLSYI 1707


>AE014296-1700|AAF50228.2| 3479|Drosophila melanogaster CG32045-PB,
            isoform B protein.
          Length = 3479

 Score =  108 bits (260), Expect = 6e-24
 Identities = 63/119 (52%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
 Frame = -1

Query: 619  PEPRVHESALQLLQLLDKRFFGS-VGPLPTDEDNGSEKGRGTLDALLCTTYCXXXXXXXX 443
            P   VH +ALQLLQ+LDKRFFGS VG L +D D   +K  GTLD LL + YC        
Sbjct: 1590 PRVEVHATALQLLQILDKRFFGSVVGTLHSDSDKEDDK-VGTLDVLLSSAYCRSQRFLSK 1648

Query: 442  XXXXLHPELTMPMFSEITARFQTARTEVRQXXXXXXXXXLVNIELVDPNVPPANPLSYI 266
                L PELTM +FSEIT RFQ+AR +VR          L N+ELV  +VPPA PLSYI
Sbjct: 1649 QLAQLRPELTMSIFSEITHRFQSAREDVRALLLQCLLPWLQNMELVATSVPPATPLSYI 1707


>AF351187-1|AAK37558.1| 1629|Drosophila melanogaster furry protein
            short isoform protein.
          Length = 1629

 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 23/35 (65%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
 Frame = -1

Query: 619  PEPRVHESALQLLQLLDKRFFGS-VGPLPTDEDNG 518
            P   VH +ALQLLQ+LDKRFFGS VG L +D D G
Sbjct: 1590 PRVEVHATALQLLQILDKRFFGSVVGTLHSDSDKG 1624


>AE014296-1705|ABI31247.1| 1629|Drosophila melanogaster CG32045-PD,
            isoform D protein.
          Length = 1629

 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 23/35 (65%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
 Frame = -1

Query: 619  PEPRVHESALQLLQLLDKRFFGS-VGPLPTDEDNG 518
            P   VH +ALQLLQ+LDKRFFGS VG L +D D G
Sbjct: 1590 PRVEVHATALQLLQILDKRFFGSVVGTLHSDSDKG 1624


>AY069603-1|AAL39748.2| 1876|Drosophila melanogaster LD36178p protein.
          Length = 1876

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 308  GRPQRAPGQPAILYTGT*IYFNKFFTNEPSAKGSNKSSFTGG 183
            G+P  +PGQP +L TG    F      +P A   + SS + G
Sbjct: 1479 GKPPLSPGQPPLLGTGRVTSFGGTSVPQPGALAKSSSSGSNG 1520


>AF172995-1|AAD48498.1| 1847|Drosophila melanogaster gigas protein
            protein.
          Length = 1847

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 308  GRPQRAPGQPAILYTGT*IYFNKFFTNEPSAKGSNKSSFTGG 183
            G+P  +PGQP +L TG    F      +P A   + SS + G
Sbjct: 1450 GKPPLSPGQPPLLGTGRVTSFGGTSVPQPGALAKSSSSGSNG 1491


>AE014296-3279|AAF49066.1| 1847|Drosophila melanogaster CG6975-PA
            protein.
          Length = 1847

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 308  GRPQRAPGQPAILYTGT*IYFNKFFTNEPSAKGSNKSSFTGG 183
            G+P  +PGQP +L TG    F      +P A   + SS + G
Sbjct: 1450 GKPPLSPGQPPLLGTGRVTSFGGTSVPQPGALAKSSSSGSNG 1491


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,361,512
Number of Sequences: 53049
Number of extensions: 647971
Number of successful extensions: 2239
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2233
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)