Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1900
         (415 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    26   0.47 

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 26.2 bits (55), Expect = 0.47
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
 Frame = -3

Query: 332 VDSTCTGPDIHNIQSGFRLK----SKKFTFRCSVGSCDVTNVRERCRDACSLSLKEIYIP 165
           ++  C+ P  H     +R +    S   T++C +  CD T   +RC  +   SL E  + 
Sbjct: 489 IEMLCSCPCEHPSDPEYRERADECSNAGTYKCGICECDGTYHGQRCECSAMESLLEPGMV 548

Query: 164 MLGRVL*RHERAKEKAKCV 108
              R+    E    + +CV
Sbjct: 549 DACRMSNASEECSGRGQCV 567


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,133
Number of Sequences: 2352
Number of extensions: 10028
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33777477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)