Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1900
         (415 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC146761-1|AAI46762.1| 1534|Homo sapiens slit homolog 1 (Drosoph...    32   0.66 
AL512424-5|CAI14258.1| 1534|Homo sapiens slit homolog 1 (Drosoph...    32   0.66 
AL442123-4|CAH70918.1| 1534|Homo sapiens slit homolog 1 (Drosoph...    32   0.66 
AB017167-1|BAA35184.1| 1534|Homo sapiens Slit-1 protein protein.       32   0.66 
AB011537-1|BAA32465.3| 1618|Homo sapiens MEGF4 protein.                32   0.66 

>BC146761-1|AAI46762.1| 1534|Homo sapiens slit homolog 1 (Drosophila)
            protein.
          Length = 1534

 Score = 32.3 bits (70), Expect = 0.66
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 287  GFRLKSKKFTFRCSVGSCDVTNVRERCRDACSL 189
            G RLK +KFTF CS G+     V +  +  C+L
Sbjct: 1500 GLRLKRRKFTFECSDGTSFAEEVEKPTKCGCAL 1532


>AL512424-5|CAI14258.1| 1534|Homo sapiens slit homolog 1 (Drosophila)
            protein.
          Length = 1534

 Score = 32.3 bits (70), Expect = 0.66
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 287  GFRLKSKKFTFRCSVGSCDVTNVRERCRDACSL 189
            G RLK +KFTF CS G+     V +  +  C+L
Sbjct: 1500 GLRLKRRKFTFECSDGTSFAEEVEKPTKCGCAL 1532


>AL442123-4|CAH70918.1| 1534|Homo sapiens slit homolog 1 (Drosophila)
            protein.
          Length = 1534

 Score = 32.3 bits (70), Expect = 0.66
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 287  GFRLKSKKFTFRCSVGSCDVTNVRERCRDACSL 189
            G RLK +KFTF CS G+     V +  +  C+L
Sbjct: 1500 GLRLKRRKFTFECSDGTSFAEEVEKPTKCGCAL 1532


>AB017167-1|BAA35184.1| 1534|Homo sapiens Slit-1 protein protein.
          Length = 1534

 Score = 32.3 bits (70), Expect = 0.66
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 287  GFRLKSKKFTFRCSVGSCDVTNVRERCRDACSL 189
            G RLK +KFTF CS G+     V +  +  C+L
Sbjct: 1500 GLRLKRRKFTFECSDGTSFAEEVEKPTKCGCAL 1532


>AB011537-1|BAA32465.3| 1618|Homo sapiens MEGF4 protein.
          Length = 1618

 Score = 32.3 bits (70), Expect = 0.66
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 287  GFRLKSKKFTFRCSVGSCDVTNVRERCRDACSL 189
            G RLK +KFTF CS G+     V +  +  C+L
Sbjct: 1584 GLRLKRRKFTFECSDGTSFAEEVEKPTKCGCAL 1616


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,670,159
Number of Sequences: 237096
Number of extensions: 1384417
Number of successful extensions: 3434
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3424
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)