Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1897
(560 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC066650-1|AAH66650.1| 874|Homo sapiens coatomer protein comple... 195 1e-49
AF100756-1|AAD43020.1| 874|Homo sapiens coat protein gamma-cop ... 195 1e-49
AB047846-1|BAB17657.1| 874|Homo sapiens gamma1-COP protein. 195 1e-49
BC110796-1|AAI10797.1| 726|Homo sapiens COPG2 protein protein. 188 9e-48
AF207598-1|AAF19433.1| 871|Homo sapiens coat protein gamma2-COP... 188 9e-48
AF157833-1|AAF14271.1| 871|Homo sapiens nonclathrin coat protei... 188 9e-48
AB047847-1|BAB17658.1| 871|Homo sapiens gamma2-COP protein. 188 9e-48
BC017443-1|AAH17443.2| 865|Homo sapiens COPG2 protein protein. 188 1e-47
AK022934-1|BAB14315.1| 799|Homo sapiens protein ( Homo sapiens ... 103 4e-22
BC014146-1|AAH14146.1| 739|Homo sapiens adaptor-related protein... 40 0.008
AL137856-9|CAI19074.1| 262|Homo sapiens adaptor-related protein... 40 0.008
AL137856-5|CAI19072.1| 739|Homo sapiens adaptor-related protein... 40 0.008
AF092094-1|AAD20448.1| 739|Homo sapiens AP-4 adaptor complex be... 40 0.008
AB209817-1|BAD93054.1| 771|Homo sapiens adaptor-related protein... 40 0.008
U91931-1|AAD03778.1| 1093|Homo sapiens AP-3 complex beta3A subun... 34 0.39
U81504-1|AAB61638.1| 1094|Homo sapiens beta-3A-adaptin subunit o... 34 0.39
BC038444-1|AAH38444.1| 1094|Homo sapiens adaptor-related protein... 34 0.39
AY623424-1|AAT49048.1| 800|Homo sapiens adaptor-related protein... 34 0.39
U37673-1|AAC50219.1| 1081|Homo sapiens beta-NAP protein. 33 0.52
BC093739-1|AAH93739.1| 1082|Homo sapiens adaptor-related protein... 33 0.52
AF022152-1|AAB71894.1| 1082|Homo sapiens AP-3 complex beta3B sub... 33 0.52
U72395-1|AAB68948.1| 890|Homo sapiens MIP protein. 33 0.91
U72069-1|AAB58254.1| 890|Homo sapiens karyopherin beta2 protein. 33 0.91
U70322-1|AAC50723.1| 890|Homo sapiens transportin protein. 33 0.91
BC040340-1|AAH40340.1| 890|Homo sapiens transportin 1 protein. 33 0.91
BC072420-1|AAH72420.1| 887|Homo sapiens transportin 2 (importin... 32 1.6
AF007748-1|AAB71349.1| 887|Homo sapiens karyopherin beta2b homo... 32 1.6
AB210011-1|BAE06093.1| 1051|Homo sapiens TNPO2 variant protein p... 32 1.6
AY971956-1|AAY46814.1| 1892|Homo sapiens abnormal spindle-like m... 30 6.4
AY367065-1|AAR12641.1| 3477|Homo sapiens abnormal spindle-like m... 30 6.4
AY101201-1|AAM48745.1| 583|Homo sapiens abnormal spindle protein. 30 6.4
AY099893-1|AAM44122.1| 825|Homo sapiens abnormal spindle protei... 30 6.4
AY099891-1|AAM44120.1| 826|Homo sapiens abnormal spindle protei... 30 6.4
AL353809-5|CAH72552.1| 3477|Homo sapiens asp (abnormal spindle) ... 30 6.4
AF509326-1|AAN40011.1| 3477|Homo sapiens abnormal spindles protein. 30 6.4
>BC066650-1|AAH66650.1| 874|Homo sapiens coatomer protein complex,
subunit gamma protein.
Length = 874
Score = 195 bits (475), Expect = 1e-49
Identities = 97/142 (68%), Positives = 114/142 (80%), Gaps = 4/142 (2%)
Frame = +1
Query: 70 MKARRDGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEE 237
M + D K+E+S N FQ+L+K+ +LQEAR FN TP++PRKC HILTKILYL+NQGE
Sbjct: 1 MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 238 LTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 417
L T EAT+ FFA TKLFQS D LRR+ YL IKE+S +A+DVIIVTSSLTKDMTGK+D Y
Sbjct: 61 LGTTEATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNY 120
Query: 418 RPAAIRALCSITDSTMLQAIER 483
R A+RALC ITDSTMLQAIER
Sbjct: 121 RGPAVRALCQITDSTMLQAIER 142
>AF100756-1|AAD43020.1| 874|Homo sapiens coat protein gamma-cop
protein.
Length = 874
Score = 195 bits (475), Expect = 1e-49
Identities = 97/142 (68%), Positives = 114/142 (80%), Gaps = 4/142 (2%)
Frame = +1
Query: 70 MKARRDGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEE 237
M + D K+E+S N FQ+L+K+ +LQEAR FN TP++PRKC HILTKILYL+NQGE
Sbjct: 1 MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 238 LTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 417
L T EAT+ FFA TKLFQS D LRR+ YL IKE+S +A+DVIIVTSSLTKDMTGK+D Y
Sbjct: 61 LGTTEATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNY 120
Query: 418 RPAAIRALCSITDSTMLQAIER 483
R A+RALC ITDSTMLQAIER
Sbjct: 121 RGPAVRALCQITDSTMLQAIER 142
>AB047846-1|BAB17657.1| 874|Homo sapiens gamma1-COP protein.
Length = 874
Score = 195 bits (475), Expect = 1e-49
Identities = 97/142 (68%), Positives = 114/142 (80%), Gaps = 4/142 (2%)
Frame = +1
Query: 70 MKARRDGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEE 237
M + D K+E+S N FQ+L+K+ +LQEAR FN TP++PRKC HILTKILYL+NQGE
Sbjct: 1 MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 238 LTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 417
L T EAT+ FFA TKLFQS D LRR+ YL IKE+S +A+DVIIVTSSLTKDMTGK+D Y
Sbjct: 61 LGTTEATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNY 120
Query: 418 RPAAIRALCSITDSTMLQAIER 483
R A+RALC ITDSTMLQAIER
Sbjct: 121 RGPAVRALCQITDSTMLQAIER 142
>BC110796-1|AAI10797.1| 726|Homo sapiens COPG2 protein protein.
Length = 726
Score = 188 bits (459), Expect = 9e-48
Identities = 92/137 (67%), Positives = 111/137 (81%), Gaps = 4/137 (2%)
Frame = +1
Query: 85 DGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQE 252
D K+E+S N FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T E
Sbjct: 6 DKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTE 65
Query: 253 ATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAI 432
AT+ FFA T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AI
Sbjct: 66 ATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAI 125
Query: 433 RALCSITDSTMLQAIER 483
RALC ITD TMLQAIER
Sbjct: 126 RALCRITDGTMLQAIER 142
>AF207598-1|AAF19433.1| 871|Homo sapiens coat protein gamma2-COP
protein.
Length = 871
Score = 188 bits (459), Expect = 9e-48
Identities = 92/137 (67%), Positives = 111/137 (81%), Gaps = 4/137 (2%)
Frame = +1
Query: 85 DGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQE 252
D K+E+S N FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T E
Sbjct: 6 DKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTE 65
Query: 253 ATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAI 432
AT+ FFA T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AI
Sbjct: 66 ATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAI 125
Query: 433 RALCSITDSTMLQAIER 483
RALC ITD TMLQAIER
Sbjct: 126 RALCRITDGTMLQAIER 142
>AF157833-1|AAF14271.1| 871|Homo sapiens nonclathrin coat protein
gamma2-COP protein.
Length = 871
Score = 188 bits (459), Expect = 9e-48
Identities = 92/137 (67%), Positives = 111/137 (81%), Gaps = 4/137 (2%)
Frame = +1
Query: 85 DGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQE 252
D K+E+S N FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T E
Sbjct: 6 DKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTE 65
Query: 253 ATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAI 432
AT+ FFA T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AI
Sbjct: 66 ATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAI 125
Query: 433 RALCSITDSTMLQAIER 483
RALC ITD TMLQAIER
Sbjct: 126 RALCRITDGTMLQAIER 142
>AB047847-1|BAB17658.1| 871|Homo sapiens gamma2-COP protein.
Length = 871
Score = 188 bits (459), Expect = 9e-48
Identities = 92/137 (67%), Positives = 111/137 (81%), Gaps = 4/137 (2%)
Frame = +1
Query: 85 DGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQE 252
D K+E+S N FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T E
Sbjct: 6 DKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTE 65
Query: 253 ATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAI 432
AT+ FFA T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AI
Sbjct: 66 ATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAI 125
Query: 433 RALCSITDSTMLQAIER 483
RALC ITD TMLQAIER
Sbjct: 126 RALCRITDGTMLQAIER 142
>BC017443-1|AAH17443.2| 865|Homo sapiens COPG2 protein protein.
Length = 865
Score = 188 bits (458), Expect = 1e-47
Identities = 89/127 (70%), Positives = 106/127 (83%)
Frame = +1
Query: 103 SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTK 282
SN FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQGE T EAT+ FFA T+
Sbjct: 10 SNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTEATEAFFAMTR 69
Query: 283 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDST 462
LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD T
Sbjct: 70 LFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGT 129
Query: 463 MLQAIER 483
MLQAIER
Sbjct: 130 MLQAIER 136
>AK022934-1|BAB14315.1| 799|Homo sapiens protein ( Homo sapiens
cDNA FLJ12872 fis, clone NT2RP2003760, highly similar to
COATOMER GAMMA SUBUNIT. ).
Length = 799
Score = 103 bits (247), Expect = 4e-22
Identities = 50/69 (72%), Positives = 58/69 (84%)
Frame = +1
Query: 277 TKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITD 456
T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD
Sbjct: 2 TRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITD 61
Query: 457 STMLQAIER 483
TMLQAIER
Sbjct: 62 GTMLQAIER 70
>BC014146-1|AAH14146.1| 739|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit protein.
Length = 739
Score = 39.5 bits (88), Expect = 0.008
Identities = 20/87 (22%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +1
Query: 193 HILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-II 369
+++ +++ + QG +++ +F K + D+V ++LVYL + +P+ D+ ++
Sbjct: 31 NVIQRVIRYMTQGLDMS-----GVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALL 85
Query: 370 VTSSLTKDMTGKDDEYRPAAIRALCSI 450
++L KD + + R A+R++CS+
Sbjct: 86 AINTLCKDCSDPNPMVRGLALRSMCSL 112
>AL137856-9|CAI19074.1| 262|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit protein.
Length = 262
Score = 39.5 bits (88), Expect = 0.008
Identities = 20/87 (22%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +1
Query: 193 HILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-II 369
+++ +++ + QG +++ +F K + D+V ++LVYL + +P+ D+ ++
Sbjct: 31 NVIQRVIRYMTQGLDMS-----GVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALL 85
Query: 370 VTSSLTKDMTGKDDEYRPAAIRALCSI 450
++L KD + + R A+R++CS+
Sbjct: 86 AINTLCKDCSDPNPMVRGLALRSMCSL 112
>AL137856-5|CAI19072.1| 739|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit protein.
Length = 739
Score = 39.5 bits (88), Expect = 0.008
Identities = 20/87 (22%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +1
Query: 193 HILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-II 369
+++ +++ + QG +++ +F K + D+V ++LVYL + +P+ D+ ++
Sbjct: 31 NVIQRVIRYMTQGLDMS-----GVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALL 85
Query: 370 VTSSLTKDMTGKDDEYRPAAIRALCSI 450
++L KD + + R A+R++CS+
Sbjct: 86 AINTLCKDCSDPNPMVRGLALRSMCSL 112
>AF092094-1|AAD20448.1| 739|Homo sapiens AP-4 adaptor complex beta4
subunit protein.
Length = 739
Score = 39.5 bits (88), Expect = 0.008
Identities = 20/87 (22%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +1
Query: 193 HILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-II 369
+++ +++ + QG +++ +F K + D+V ++LVYL + +P+ D+ ++
Sbjct: 31 NVIQRVIRYMTQGLDMS-----GVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALL 85
Query: 370 VTSSLTKDMTGKDDEYRPAAIRALCSI 450
++L KD + + R A+R++CS+
Sbjct: 86 AINTLCKDCSDPNPMVRGLALRSMCSL 112
>AB209817-1|BAD93054.1| 771|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit variant protein.
Length = 771
Score = 39.5 bits (88), Expect = 0.008
Identities = 20/87 (22%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +1
Query: 193 HILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-II 369
+++ +++ + QG +++ +F K + D+V ++LVYL + +P+ D+ ++
Sbjct: 63 NVIQRVIRYMTQGLDMS-----GVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALL 117
Query: 370 VTSSLTKDMTGKDDEYRPAAIRALCSI 450
++L KD + + R A+R++CS+
Sbjct: 118 AINTLCKDCSDPNPMVRGLALRSMCSL 144
>U91931-1|AAD03778.1| 1093|Homo sapiens AP-3 complex beta3A subunit
protein.
Length = 1093
Score = 33.9 bits (74), Expect = 0.39
Identities = 18/69 (26%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +1
Query: 247 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 423
+ A+++F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 74 KNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 133
Query: 424 AAIRALCSI 450
+A+R L SI
Sbjct: 134 SALRVLSSI 142
>U81504-1|AAB61638.1| 1094|Homo sapiens beta-3A-adaptin subunit of
the AP-3 complex protein.
Length = 1094
Score = 33.9 bits (74), Expect = 0.39
Identities = 18/69 (26%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +1
Query: 247 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 423
+ A+++F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 74 KNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 133
Query: 424 AAIRALCSI 450
+A+R L SI
Sbjct: 134 SALRVLSSI 142
>BC038444-1|AAH38444.1| 1094|Homo sapiens adaptor-related protein
complex 3, beta 1 subunit protein.
Length = 1094
Score = 33.9 bits (74), Expect = 0.39
Identities = 18/69 (26%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +1
Query: 247 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 423
+ A+++F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 74 KNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 133
Query: 424 AAIRALCSI 450
+A+R L SI
Sbjct: 134 SALRVLSSI 142
>AY623424-1|AAT49048.1| 800|Homo sapiens adaptor-related protein
complex 3 beta 1 subunit protein.
Length = 800
Score = 33.9 bits (74), Expect = 0.39
Identities = 18/69 (26%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +1
Query: 247 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 423
+ A+++F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 74 KNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 133
Query: 424 AAIRALCSI 450
+A+R L SI
Sbjct: 134 SALRVLSSI 142
>U37673-1|AAC50219.1| 1081|Homo sapiens beta-NAP protein.
Length = 1081
Score = 33.5 bits (73), Expect = 0.52
Identities = 18/69 (26%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +1
Query: 247 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 423
+ A+D+F A K K++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 69 KNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRA 128
Query: 424 AAIRALCSI 450
+A+R L SI
Sbjct: 129 SALRVLSSI 137
>BC093739-1|AAH93739.1| 1082|Homo sapiens adaptor-related protein
complex 3, beta 2 subunit protein.
Length = 1082
Score = 33.5 bits (73), Expect = 0.52
Identities = 18/69 (26%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +1
Query: 247 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 423
+ A+D+F A K K++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 69 KNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRA 128
Query: 424 AAIRALCSI 450
+A+R L SI
Sbjct: 129 SALRVLSSI 137
>AF022152-1|AAB71894.1| 1082|Homo sapiens AP-3 complex beta3B
subunit protein.
Length = 1082
Score = 33.5 bits (73), Expect = 0.52
Identities = 18/69 (26%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +1
Query: 247 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 423
+ A+D+F A K K++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 69 KNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRA 128
Query: 424 AAIRALCSI 450
+A+R L SI
Sbjct: 129 SALRVLSSI 137
>U72395-1|AAB68948.1| 890|Homo sapiens MIP protein.
Length = 890
Score = 32.7 bits (71), Expect = 0.91
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +1
Query: 283 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 450
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 767 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>U72069-1|AAB58254.1| 890|Homo sapiens karyopherin beta2 protein.
Length = 890
Score = 32.7 bits (71), Expect = 0.91
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +1
Query: 283 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 450
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 767 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>U70322-1|AAC50723.1| 890|Homo sapiens transportin protein.
Length = 890
Score = 32.7 bits (71), Expect = 0.91
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +1
Query: 283 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 450
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 767 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>BC040340-1|AAH40340.1| 890|Homo sapiens transportin 1 protein.
Length = 890
Score = 32.7 bits (71), Expect = 0.91
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +1
Query: 283 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 450
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 767 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>BC072420-1|AAH72420.1| 887|Homo sapiens transportin 2 (importin 3,
karyopherin beta 2b) protein.
Length = 887
Score = 31.9 bits (69), Expect = 1.6
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +1
Query: 283 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALC 444
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C
Sbjct: 764 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGIC 815
>AF007748-1|AAB71349.1| 887|Homo sapiens karyopherin beta2b homolog
protein.
Length = 887
Score = 31.9 bits (69), Expect = 1.6
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +1
Query: 283 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALC 444
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C
Sbjct: 764 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGIC 815
>AB210011-1|BAE06093.1| 1051|Homo sapiens TNPO2 variant protein
protein.
Length = 1051
Score = 31.9 bits (69), Expect = 1.6
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +1
Query: 283 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALC 444
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C
Sbjct: 928 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGIC 979
>AY971956-1|AAY46814.1| 1892|Homo sapiens abnormal spindle-like
microcephaly associated splice variant 1 protein.
Length = 1892
Score = 29.9 bits (64), Expect = 6.4
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +1
Query: 73 KARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHP-----RKCIHILTKILYLLNQGEE 237
K + DG ED+NV + + T ++E + + +P P +K ++ T I ++ E+
Sbjct: 574 KRKSDGSMEDANVRVAITEHTEVREIKRIHFSPSEPKTSAVKKTKNVTTPISKRISNREK 633
Query: 238 LTTQEATDIFFATTKL 285
L ++ TD+ T +
Sbjct: 634 LNLKKKTDLSIFRTPI 649
>AY367065-1|AAR12641.1| 3477|Homo sapiens abnormal spindle-like
microcephaly-associated protein protein.
Length = 3477
Score = 29.9 bits (64), Expect = 6.4
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +1
Query: 73 KARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHP-----RKCIHILTKILYLLNQGEE 237
K + DG ED+NV + + T ++E + + +P P +K ++ T I ++ E+
Sbjct: 574 KRKSDGSMEDANVRVAITEHTEVREIKRIHFSPSEPKTSAVKKTKNVTTPISKRISNREK 633
Query: 238 LTTQEATDIFFATTKL 285
L ++ TD+ T +
Sbjct: 634 LNLKKKTDLSIFRTPI 649
>AY101201-1|AAM48745.1| 583|Homo sapiens abnormal spindle protein.
Length = 583
Score = 29.9 bits (64), Expect = 6.4
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +1
Query: 73 KARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHP-----RKCIHILTKILYLLNQGEE 237
K + DG ED+NV + + T ++E + + +P P +K ++ T I ++ E+
Sbjct: 463 KRKSDGSMEDANVRVAITEHTEVREIKRIHFSPSEPKTSAVKKTKNVTTPISKRISNREK 522
Query: 238 LTTQEATDIFFATTKL 285
L ++ TD+ T +
Sbjct: 523 LNLKKKTDLSIFRTPI 538
>AY099893-1|AAM44122.1| 825|Homo sapiens abnormal spindle protein
ASP protein.
Length = 825
Score = 29.9 bits (64), Expect = 6.4
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +1
Query: 73 KARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHP-----RKCIHILTKILYLLNQGEE 237
K + DG ED+NV + + T ++E + + +P P +K ++ T I ++ E+
Sbjct: 168 KRKSDGSMEDANVRVAITEHTEVREIKRIHFSPSEPKTSAVKKTKNVTTPISKRISNREK 227
Query: 238 LTTQEATDIFFATTKL 285
L ++ TD+ T +
Sbjct: 228 LNLKKKTDLSIFRTPI 243
>AY099891-1|AAM44120.1| 826|Homo sapiens abnormal spindle protein
ASP protein.
Length = 826
Score = 29.9 bits (64), Expect = 6.4
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +1
Query: 73 KARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHP-----RKCIHILTKILYLLNQGEE 237
K + DG ED+NV + + T ++E + + +P P +K ++ T I ++ E+
Sbjct: 168 KRKSDGSMEDANVRVAITEHTEVREIKRIHFSPSEPKTSAVKKTKNVTTPISKRISNREK 227
Query: 238 LTTQEATDIFFATTKL 285
L ++ TD+ T +
Sbjct: 228 LNLKKKTDLSIFRTPI 243
>AL353809-5|CAH72552.1| 3477|Homo sapiens asp (abnormal spindle)
homolog, microcephaly associated (Drosophila) protein.
Length = 3477
Score = 29.9 bits (64), Expect = 6.4
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +1
Query: 73 KARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHP-----RKCIHILTKILYLLNQGEE 237
K + DG ED+NV + + T ++E + + +P P +K ++ T I ++ E+
Sbjct: 574 KRKSDGSMEDANVRVAITEHTEVREIKRIHFSPSEPKTSAVKKTKNVTTPISKRISNREK 633
Query: 238 LTTQEATDIFFATTKL 285
L ++ TD+ T +
Sbjct: 634 LNLKKKTDLSIFRTPI 649
>AF509326-1|AAN40011.1| 3477|Homo sapiens abnormal spindles protein.
Length = 3477
Score = 29.9 bits (64), Expect = 6.4
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +1
Query: 73 KARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHP-----RKCIHILTKILYLLNQGEE 237
K + DG ED+NV + + T ++E + + +P P +K ++ T I ++ E+
Sbjct: 574 KRKSDGSMEDANVRVAITEHTEVREIKRIHFSPSEPKTSAVKKTKNVTTPISKRISNREK 633
Query: 238 LTTQEATDIFFATTKL 285
L ++ TD+ T +
Sbjct: 634 LNLKKKTDLSIFRTPI 649
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,630,587
Number of Sequences: 237096
Number of extensions: 1688649
Number of successful extensions: 3147
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 3093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3147
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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