Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1897
(560 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68880-8|CAJ43445.1| 883|Caenorhabditis elegans Hypothetical pr... 181 4e-46
Z68880-7|CAA93095.1| 870|Caenorhabditis elegans Hypothetical pr... 180 8e-46
AF125459-7|AAD12836.1| 971|Caenorhabditis elegans Hypothetical ... 30 0.99
AC006830-1|AAK68610.3| 802|Caenorhabditis elegans Hypothetical ... 29 1.7
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 29 2.3
U00032-4|AAL32216.1| 953|Caenorhabditis elegans Rabphilin prote... 29 3.0
U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin prote... 29 3.0
U00032-2|AAL32218.1| 962|Caenorhabditis elegans Rabphilin prote... 29 3.0
U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin prote... 29 3.0
AF399852-1|AAK84870.1| 953|Caenorhabditis elegans rabphilin pro... 29 3.0
Z50739-3|CAA90603.2| 286|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 28 5.3
AC006810-5|AAF59629.2| 516|Caenorhabditis elegans Cytochrome p4... 27 7.0
DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-t... 27 9.2
AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-t... 27 9.2
AF077542-1|AAC26295.2| 386|Caenorhabditis elegans Serpentine re... 27 9.2
AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel... 27 9.2
AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel... 27 9.2
AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel... 27 9.2
>Z68880-8|CAJ43445.1| 883|Caenorhabditis elegans Hypothetical
protein T14G10.5b protein.
Length = 883
Score = 181 bits (440), Expect = 4e-46
Identities = 89/166 (53%), Positives = 119/166 (71%)
Frame = +1
Query: 58 EQSIMKARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEE 237
+ S MK + +E NV+ +LDKT++LQEAR FN TP++ RKC IL+K++Y++ QGE
Sbjct: 10 QSSRMKTNKKDEETGGNVYAHLDKTSVLQEARAFNETPINARKCCFILSKLIYIIQQGES 69
Query: 238 LTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEY 417
+ EAT+ FF TKL+QSKDV LRR+VYL +KEL+ ++ DVIIVTSSLTKDMTG++D Y
Sbjct: 70 IGRTEATEAFFGVTKLWQSKDVSLRRMVYLAVKELAEVSDDVIIVTSSLTKDMTGREDLY 129
Query: 418 RPAAIRALCSITDSTMLQAIERGHETSYC**ESCSRICRLGSALHL 555
R AAIRALC ITD+ MLQ IER + + S + S++HL
Sbjct: 130 RAAAIRALCKITDTGMLQTIERYMKQAIVDRNSAISSSAIVSSIHL 175
>Z68880-7|CAA93095.1| 870|Caenorhabditis elegans Hypothetical
protein T14G10.5a protein.
Length = 870
Score = 180 bits (437), Expect = 8e-46
Identities = 88/162 (54%), Positives = 117/162 (72%)
Frame = +1
Query: 70 MKARRDGKEEDSNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQ 249
MK + +E NV+ +LDKT++LQEAR FN TP++ RKC IL+K++Y++ QGE +
Sbjct: 1 MKTNKKDEETGGNVYAHLDKTSVLQEARAFNETPINARKCCFILSKLIYIIQQGESIGRT 60
Query: 250 EATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAA 429
EAT+ FF TKL+QSKDV LRR+VYL +KEL+ ++ DVIIVTSSLTKDMTG++D YR AA
Sbjct: 61 EATEAFFGVTKLWQSKDVSLRRMVYLAVKELAEVSDDVIIVTSSLTKDMTGREDLYRAAA 120
Query: 430 IRALCSITDSTMLQAIERGHETSYC**ESCSRICRLGSALHL 555
IRALC ITD+ MLQ IER + + S + S++HL
Sbjct: 121 IRALCKITDTGMLQTIERYMKQAIVDRNSAISSSAIVSSIHL 162
>AF125459-7|AAD12836.1| 971|Caenorhabditis elegans Hypothetical
protein Y25C1A.5 protein.
Length = 971
Score = 30.3 bits (65), Expect = 0.99
Identities = 20/102 (19%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Frame = +1
Query: 190 IHILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYL---CIKELSP---M 351
I L K++Y++ GE+ T+Q + + S + L++++ + C+ + +
Sbjct: 39 IEALKKLIYMILNGEK-TSQSM--LMYVIRFCLPSNEHTLKKVLLIFWECVPKTDSNGKL 95
Query: 352 AQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAI 477
++I+V + KD+ ++ R + +R LC + + +L+ +
Sbjct: 96 LHEMILVCDAYRKDLQHPNEFVRGSTLRFLCKLREPELLEPL 137
>AC006830-1|AAK68610.3| 802|Caenorhabditis elegans Hypothetical
protein ZK105.3 protein.
Length = 802
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -1
Query: 287 NSFVVAKNISVASCVVNSSPWFSK*SIFVKIWMHFLGCT 171
NS+V+ KN++ VVN+ PW +F +++ + T
Sbjct: 486 NSYVLKKNLNTVLIVVNNYPWKYGMGLFQRLYEPYFAST 524
>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical protein
T21E8.1b protein.
Length = 1204
Score = 29.1 bits (62), Expect = 2.3
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 5/129 (3%)
Frame = +1
Query: 52 LKEQSIMKARRDGKEEDSNVFQNLDKTTL--LQEARYFNSTPVHPRKCIHILTKILYLLN 225
L E A +ED+ F+N ++T + L+ R + + K + ++++ L ++
Sbjct: 793 LAEYCYEAATETAIQEDTIAFENSNRTAIEALENVRTVRALNLED-KIMSLISEHLQKIH 851
Query: 226 QG--EELTTQEATDIFFATTKLFQSKDVVLRRLVYLCI-KELSPMAQDVIIVTSSLTKDM 396
+ + Q A + + LF V + YL + KE++PM ++++T S+T +M
Sbjct: 852 KSYFKRAIIQGAANGLSLSCFLFVYS-VSFKFGTYLALRKEVAPMDTYLVLMTLSMTANM 910
Query: 397 TGKDDEYRP 423
G Y P
Sbjct: 911 AGSAAAYLP 919
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical protein
T21E8.1a protein.
Length = 1263
Score = 29.1 bits (62), Expect = 2.3
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 5/129 (3%)
Frame = +1
Query: 52 LKEQSIMKARRDGKEEDSNVFQNLDKTTL--LQEARYFNSTPVHPRKCIHILTKILYLLN 225
L E A +ED+ F+N ++T + L+ R + + K + ++++ L ++
Sbjct: 852 LAEYCYEAATETAIQEDTIAFENSNRTAIEALENVRTVRALNLED-KIMSLISEHLQKIH 910
Query: 226 QG--EELTTQEATDIFFATTKLFQSKDVVLRRLVYLCI-KELSPMAQDVIIVTSSLTKDM 396
+ + Q A + + LF V + YL + KE++PM ++++T S+T +M
Sbjct: 911 KSYFKRAIIQGAANGLSLSCFLFVYS-VSFKFGTYLALRKEVAPMDTYLVLMTLSMTANM 969
Query: 397 TGKDDEYRP 423
G Y P
Sbjct: 970 AGSAAAYLP 978
>U00032-4|AAL32216.1| 953|Caenorhabditis elegans Rabphilin protein
1, isoform a protein.
Length = 953
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = -3
Query: 525 PTAGFLSTIACFMPPLNSLQHCTVCDATQSSNGGRSV----LIVFTRHVLRK*RSHND 364
P + S C PLN ++H + +T SS G R V ++ H + ++HND
Sbjct: 501 PISSRTSPDNCNSSPLNVMEHKSSSASTASSGGNRRVGSAEPVLNNHHAMHNNQNHND 558
>U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin protein
1, isoform b protein.
Length = 1028
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = -3
Query: 525 PTAGFLSTIACFMPPLNSLQHCTVCDATQSSNGGRSV----LIVFTRHVLRK*RSHND 364
P + S C PLN ++H + +T SS G R V ++ H + ++HND
Sbjct: 576 PISSRTSPDNCNSSPLNVMEHKSSSASTASSGGNRRVGSAEPVLNNHHAMHNNQNHND 633
>U00032-2|AAL32218.1| 962|Caenorhabditis elegans Rabphilin protein
1, isoform c protein.
Length = 962
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = -3
Query: 525 PTAGFLSTIACFMPPLNSLQHCTVCDATQSSNGGRSV----LIVFTRHVLRK*RSHND 364
P + S C PLN ++H + +T SS G R V ++ H + ++HND
Sbjct: 510 PISSRTSPDNCNSSPLNVMEHKSSSASTASSGGNRRVGSAEPVLNNHHAMHNNQNHND 567
>U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin protein
1, isoform d protein.
Length = 1106
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = -3
Query: 525 PTAGFLSTIACFMPPLNSLQHCTVCDATQSSNGGRSV----LIVFTRHVLRK*RSHND 364
P + S C PLN ++H + +T SS G R V ++ H + ++HND
Sbjct: 654 PISSRTSPDNCNSSPLNVMEHKSSSASTASSGGNRRVGSAEPVLNNHHAMHNNQNHND 711
>AF399852-1|AAK84870.1| 953|Caenorhabditis elegans rabphilin
protein.
Length = 953
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = -3
Query: 525 PTAGFLSTIACFMPPLNSLQHCTVCDATQSSNGGRSV----LIVFTRHVLRK*RSHND 364
P + S C PLN ++H + +T SS G R V ++ H + ++HND
Sbjct: 501 PISSRTSPDNCNSSPLNVMEHKSSSASTASSGGNRRVGSAEPVLNNHHAMHNNQNHND 558
>Z50739-3|CAA90603.2| 286|Caenorhabditis elegans Hypothetical
protein F13D2.4 protein.
Length = 286
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 118 NLDKTTLLQEARYFNSTPVH 177
+LDKTT+ EA+YF+ PV+
Sbjct: 225 DLDKTTVTVEAKYFHGKPVN 244
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical protein
T21E8.2 protein.
Length = 1263
Score = 27.9 bits (59), Expect = 5.3
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Frame = +1
Query: 94 EEDSNVFQNLDKTTL--LQEARYFNSTPVHPRKCIHILTKILYLLNQG--EELTTQEATD 261
+ED+ F+N ++T + L+ R + + K + ++++ L +++ + Q A +
Sbjct: 866 QEDTIAFENSNRTAIEALENMRTVRALNLED-KIMSLISEHLQKIHKSYFKRAIIQGAAN 924
Query: 262 IFFATTKLFQSKDVVLRRLVYLCI-KELSPMAQDVIIVTSSLTKDMTGKDDEYRP 423
+ LF V + YL + KE++PM +I+ T S+T +M G Y P
Sbjct: 925 GLSLSCYLFVYS-VSFKFGTYLALRKEVAPMDTYLILETLSMTANMAGSAAAYLP 978
>AC006810-5|AAF59629.2| 516|Caenorhabditis elegans Cytochrome p450
family protein 32B1 protein.
Length = 516
Score = 27.5 bits (58), Expect = 7.0
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Frame = +1
Query: 307 LRRLVYL--CIKELSPMAQDVIIVTSSLTKDM----TGKDDEYRPAAIRALCSI 450
++++VYL CIKE M V V+ LT+D+ K D PA I + +I
Sbjct: 363 IQKMVYLEQCIKETLRMTPPVPFVSRKLTEDVKIPHATKPDLLLPAGINCMINI 416
>DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1797
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 159 QLYTRASEKMHPYFDENTLFTKPRR-RINHAGGYGYIFCHYETVSVKG 299
++Y + +E MHP ++T PR +H G + +ET+S KG
Sbjct: 1056 EVYGKDTEAMHPKIMVPRVWTNPRNFNFDHVG--NAMLALFETLSFKG 1101
>AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1831
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 159 QLYTRASEKMHPYFDENTLFTKPRR-RINHAGGYGYIFCHYETVSVKG 299
++Y + +E MHP ++T PR +H G + +ET+S KG
Sbjct: 1090 EVYGKDTEAMHPKIMVPRVWTNPRNFNFDHVG--NAMLALFETLSFKG 1135
>AF077542-1|AAC26295.2| 386|Caenorhabditis elegans Serpentine
receptor, class w protein66 protein.
Length = 386
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = -1
Query: 212 SIFVKI--WMHFLGCTGVELKYLASCKRVVL-SRFWKTLLSS 96
+IFV I +HFL C GV +Y S K ++ R +K L +S
Sbjct: 324 TIFVAINASVHFLICLGVHSQYRKSAKELLFCERIYKNLKTS 365
>AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
a protein.
Length = 1562
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 159 QLYTRASEKMHPYFDENTLFTKPRR-RINHAGGYGYIFCHYETVSVKG 299
++Y + +E MHP ++T PR +H G + +ET+S KG
Sbjct: 1148 EVYGKDTEAMHPKIMVPRVWTNPRNFNFDHVG--NAMLALFETLSFKG 1193
>AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
c protein.
Length = 1913
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 159 QLYTRASEKMHPYFDENTLFTKPRR-RINHAGGYGYIFCHYETVSVKG 299
++Y + +E MHP ++T PR +H G + +ET+S KG
Sbjct: 1201 EVYGKDTEAMHPKIMVPRVWTNPRNFNFDHVG--NAMLALFETLSFKG 1246
>AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
d protein.
Length = 1861
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 159 QLYTRASEKMHPYFDENTLFTKPRR-RINHAGGYGYIFCHYETVSVKG 299
++Y + +E MHP ++T PR +H G + +ET+S KG
Sbjct: 1120 EVYGKDTEAMHPKIMVPRVWTNPRNFNFDHVG--NAMLALFETLSFKG 1165
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,247,820
Number of Sequences: 27780
Number of extensions: 277116
Number of successful extensions: 679
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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