Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1896
(586 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 41 7e-04
U58746-6|AAB00626.2| 378|Caenorhabditis elegans Hypothetical pr... 34 0.065
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr... 34 0.085
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass... 34 0.085
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein. 34 0.085
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein. 34 0.085
Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr... 33 0.20
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele... 33 0.20
Z98877-2|CAB11570.1| 907|Caenorhabditis elegans Hypothetical pr... 32 0.34
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 32 0.34
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 32 0.34
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 32 0.34
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 32 0.34
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 32 0.34
Z81458-2|CAB03822.1| 386|Caenorhabditis elegans Hypothetical pr... 31 0.46
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum... 31 0.46
Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical p... 31 0.60
Z81460-5|CAB03832.1| 952|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z70209-3|CAA94147.1| 952|Caenorhabditis elegans Hypothetical pr... 31 0.80
AF038605-6|AAB92018.2| 247|Caenorhabditis elegans Hypothetical ... 31 0.80
Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical p... 30 1.1
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z75553-4|CAA99946.1| 389|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr... 30 1.1
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 30 1.1
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 30 1.1
Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 30 1.4
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 30 1.4
U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro... 30 1.4
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical... 30 1.4
AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin pro... 30 1.4
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 30 1.4
Z74030-19|CAA98449.2| 841|Caenorhabditis elegans Hypothetical p... 29 2.4
Z72508-10|CAA96644.2| 841|Caenorhabditis elegans Hypothetical p... 29 2.4
U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical p... 29 2.4
Z35604-2|CAA84677.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.2
X77495-1|CAA54629.1| 402|Caenorhabditis elegans lag-2 protein. 29 3.2
U19744-1|AAA85704.1| 809|Caenorhabditis elegans integrin beta p... 29 3.2
AC024205-1|AAF36047.1| 402|Caenorhabditis elegans Lin-12 and gl... 29 3.2
Z49072-4|CAA88882.4| 414|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z73911-8|CAL64005.1| 367|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z73911-7|CAA98142.2| 483|Caenorhabditis elegans Hypothetical pr... 28 5.6
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 28 5.6
Z73972-6|CAI46600.1| 262|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z67756-1|CAA91762.1| 157|Caenorhabditis elegans Hypothetical pr... 27 7.4
U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z74042-2|CAA98528.2| 379|Caenorhabditis elegans Hypothetical pr... 27 9.8
U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical p... 27 9.8
AJ561210-1|CAD99212.1| 151|Caenorhabditis elegans NAS-20 protei... 27 9.8
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
protein T01D3.7 protein.
Length = 2882
Score = 40.7 bits (91), Expect = 7e-04
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +2
Query: 2 SARGICSNLNKCVCNRGWTGPDCS 73
S G+C+ LN C+CN GW+G DCS
Sbjct: 800 SGNGLCNLLNICLCNDGWSGSDCS 823
Score = 29.5 bits (63), Expect = 1.8
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +2
Query: 2 SARGICSNLNKCVCNRGWTGPDCS 73
+ G C N C C+ GW G CS
Sbjct: 832 TGHGKCIQPNSCECDAGWMGETCS 855
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 2 SARGICSNLNKCVCNRGWTGPDCS 73
S RG C C+C G+TG DCS
Sbjct: 770 SRRGTCKE-GICICPHGYTGFDCS 792
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = +2
Query: 11 GICSNLNK-CVCNRGWTGPDC 70
GIC L K C C +GW G C
Sbjct: 935 GICEPLTKTCSCAKGWMGGAC 955
>U58746-6|AAB00626.2| 378|Caenorhabditis elegans Hypothetical
protein R05G6.9 protein.
Length = 378
Score = 34.3 bits (75), Expect = 0.065
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = +2
Query: 2 SARGICSNLNK---CVCNRGWTGPDCSQ 76
S G+C K C CN GWTGP C+Q
Sbjct: 346 SGNGLCIGSLKSYSCTCNLGWTGPTCAQ 373
>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical
protein W02C12.1 protein.
Length = 1372
Score = 33.9 bits (74), Expect = 0.085
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 32 KCVCNRGWTGPDCSQ 76
KCVC GWTGP C Q
Sbjct: 241 KCVCKSGWTGPKCEQ 255
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +2
Query: 32 KCVCNRGWTGPDCSQH-DALPPSP 100
+C+C GWTG +C Q+ D SP
Sbjct: 87 QCLCQPGWTGENCDQNIDECAASP 110
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +2
Query: 32 KCVCNRGWTGPDCS-QHDALPPSP 100
KCVC G+TGP C + D SP
Sbjct: 203 KCVCKPGYTGPRCDVKQDQCADSP 226
>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 152, isoform a protein.
Length = 2560
Score = 33.9 bits (74), Expect = 0.085
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = +2
Query: 8 RGICSNLNKCVCNRGWTGPDCSQH-DALPPSPTPYVPENATKAAYNMTKKETPYGESIPV 184
RG+C N C C GW G DCS DA+ P P + +K + P
Sbjct: 422 RGVCVN-GTCYCMDGWRGNDCSVFADAIVHVPQAQSPPRRGQEPTESSKTRKAQVKPTPT 480
Query: 185 SE 190
SE
Sbjct: 481 SE 482
Score = 31.9 bits (69), Expect = 0.34
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 2 SARGICSNLNKCVCNRGWTGPDC 70
+ RG C +C CN GWTG C
Sbjct: 387 NGRGRCDTDGRCRCNPGWTGEAC 409
Score = 29.9 bits (64), Expect = 1.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 8 RGICSNLNKCVCNRGWTGPDCS 73
RG C++ C C+ GW G +C+
Sbjct: 571 RGKCASDGSCKCSSGWNGENCA 592
>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
Length = 2502
Score = 33.9 bits (74), Expect = 0.085
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = +2
Query: 8 RGICSNLNKCVCNRGWTGPDCSQH-DALPPSPTPYVPENATKAAYNMTKKETPYGESIPV 184
RG+C N C C GW G DCS DA+ P P + +K + P
Sbjct: 364 RGVCVN-GTCYCMDGWRGNDCSVFADAIVHVPQAQSPPRRGQEPTESSKTRKAQVKPTPT 422
Query: 185 SE 190
SE
Sbjct: 423 SE 424
Score = 31.9 bits (69), Expect = 0.34
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 2 SARGICSNLNKCVCNRGWTGPDC 70
+ RG C +C CN GWTG C
Sbjct: 329 NGRGRCDTDGRCRCNPGWTGEAC 351
Score = 29.9 bits (64), Expect = 1.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 8 RGICSNLNKCVCNRGWTGPDCS 73
RG C++ C C+ GW G +C+
Sbjct: 513 RGKCASDGSCKCSSGWNGENCA 534
>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
Length = 2684
Score = 33.9 bits (74), Expect = 0.085
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = +2
Query: 8 RGICSNLNKCVCNRGWTGPDCSQH-DALPPSPTPYVPENATKAAYNMTKKETPYGESIPV 184
RG+C N C C GW G DCS DA+ P P + +K + P
Sbjct: 546 RGVCVN-GTCYCMDGWRGNDCSVFADAIVHVPQAQSPPRRGQEPTESSKTRKAQVKPTPT 604
Query: 185 SE 190
SE
Sbjct: 605 SE 606
Score = 31.9 bits (69), Expect = 0.34
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 2 SARGICSNLNKCVCNRGWTGPDC 70
+ RG C +C CN GWTG C
Sbjct: 511 NGRGRCDTDGRCRCNPGWTGEAC 533
Score = 29.9 bits (64), Expect = 1.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 8 RGICSNLNKCVCNRGWTGPDCS 73
RG C++ C C+ GW G +C+
Sbjct: 695 RGKCASDGSCKCSSGWNGENCA 716
>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 32.7 bits (71), Expect = 0.20
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 11 GICSNLNKCVCNRGWTGPDCSQ 76
G+C N C C G+TGP C +
Sbjct: 459 GVCKNTGYCECQYGYTGPTCEE 480
>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 32.7 bits (71), Expect = 0.20
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 11 GICSNLNKCVCNRGWTGPDCSQ 76
G+C N C C G+TGP C +
Sbjct: 459 GVCKNTGYCECQYGYTGPTCEE 480
>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein (
C.elegans glp-1 gene,complete cds. ).
Length = 1295
Score = 32.7 bits (71), Expect = 0.20
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 11 GICSNLNKCVCNRGWTGPDCSQ 76
G+C N C C G+TGP C +
Sbjct: 459 GVCKNTGYCECQYGYTGPTCEE 480
>Z98877-2|CAB11570.1| 907|Caenorhabditis elegans Hypothetical
protein Y69H2.2 protein.
Length = 907
Score = 31.9 bits (69), Expect = 0.34
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 35 CVCNRGWTGPDCSQHDALPPSPTPYV 112
C+C WTGPDC A +P P V
Sbjct: 328 CICEPLWTGPDCENPVASACTPNPCV 353
Score = 30.7 bits (66), Expect = 0.80
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 11 GICSNLNKCVCNRGWTGPDC-SQHDALPPSPTPY 109
GI +N C C+ GWTG +C + D P P Y
Sbjct: 440 GITTNYT-CTCDDGWTGANCETMIDFCTPDPCKY 472
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 31.9 bits (69), Expect = 0.34
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = +2
Query: 8 RGI-CSNLN-KCVCNRGWTGPDCSQH 79
RG+ C + KC C+RGWTG C H
Sbjct: 479 RGVGCDGADGKCQCDRGWTGHRCEHH 504
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 11 GICSNLNKCVCNRGWTGPDC 70
G C+ KCVC+ GW G C
Sbjct: 213 GKCNKEGKCVCSDGWGGEFC 232
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 31.9 bits (69), Expect = 0.34
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = +2
Query: 8 RGI-CSNLN-KCVCNRGWTGPDCSQH 79
RG+ C + KC C+RGWTG C H
Sbjct: 479 RGVGCDGADGKCQCDRGWTGHRCEHH 504
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 11 GICSNLNKCVCNRGWTGPDC 70
G C+ KCVC+ GW G C
Sbjct: 213 GKCNKEGKCVCSDGWGGEFC 232
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 31.9 bits (69), Expect = 0.34
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = +2
Query: 8 RGI-CSNLN-KCVCNRGWTGPDCSQH 79
RG+ C + KC C+RGWTG C H
Sbjct: 479 RGVGCDGADGKCQCDRGWTGHRCEHH 504
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 11 GICSNLNKCVCNRGWTGPDC 70
G C+ KCVC+ GW G C
Sbjct: 213 GKCNKEGKCVCSDGWGGEFC 232
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 31.9 bits (69), Expect = 0.34
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = +2
Query: 8 RGI-CSNLN-KCVCNRGWTGPDCSQH 79
RG+ C + KC C+RGWTG C H
Sbjct: 479 RGVGCDGADGKCQCDRGWTGHRCEHH 504
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 11 GICSNLNKCVCNRGWTGPDC 70
G C+ KCVC+ GW G C
Sbjct: 213 GKCNKEGKCVCSDGWGGEFC 232
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 31.9 bits (69), Expect = 0.34
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 17 CSNLNKCVCNRGWTGPDCSQHDA 85
C + + C C++GWTGP C +H A
Sbjct: 1739 CRSYSFCECDKGWTGPHC-RHKA 1760
>Z81458-2|CAB03822.1| 386|Caenorhabditis elegans Hypothetical
protein C03E10.3 protein.
Length = 386
Score = 31.5 bits (68), Expect = 0.46
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +1
Query: 1 LSPRDLFQPKQVRLQPRLDGSRLFTARRPPALADPL-RTRERHESSIQHDQKGN 159
L+ +DL P + +PR DGS+L D + ++ E+H D K N
Sbjct: 262 LATKDLKDPPTLEPRPRFDGSKLLAEMSQTETIDSMKKSWEKHHKKFMKDNKRN 315
>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
homolog protein 1 protein.
Length = 1722
Score = 31.5 bits (68), Expect = 0.46
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +2
Query: 32 KCVCNRGWTGPDCSQ 76
+C C+RG+TGP CSQ
Sbjct: 1635 ECACDRGYTGPTCSQ 1649
>Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical
protein Y69H2.12 protein.
Length = 528
Score = 31.1 bits (67), Expect = 0.60
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 11 GICSNLNKCVCNRGWTGPDC-SQHDALPPSPTPYVPENATKAAY 139
GI +N C C+ GWTG +C + D P+P Y N+T + Y
Sbjct: 456 GITTNYT-CTCDSGWTGENCDTMIDYCIPNPCSY---NSTCSPY 495
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 7/40 (17%)
Frame = +2
Query: 8 RGICSNLN-------KCVCNRGWTGPDCSQHDALPPSPTP 106
+GIC NL+ +C+C WT DC A +P+P
Sbjct: 328 QGICINLSSDVTNGYQCICGPLWTDTDCETPVASACTPSP 367
>Z81460-5|CAB03832.1| 952|Caenorhabditis elegans Hypothetical
protein C04A11.4 protein.
Length = 952
Score = 30.7 bits (66), Expect = 0.80
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 8 RGICSNLNKCVCNRGWTGPDC 70
RG+C+N+ C C RG+ G C
Sbjct: 631 RGVCNNVGNCHCERGFGGIAC 651
>Z70209-3|CAA94147.1| 952|Caenorhabditis elegans Hypothetical
protein C04A11.4 protein.
Length = 952
Score = 30.7 bits (66), Expect = 0.80
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 8 RGICSNLNKCVCNRGWTGPDC 70
RG+C+N+ C C RG+ G C
Sbjct: 631 RGVCNNVGNCHCERGFGGIAC 651
>AF038605-6|AAB92018.2| 247|Caenorhabditis elegans Hypothetical
protein C02B10.3 protein.
Length = 247
Score = 30.7 bits (66), Expect = 0.80
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 32 KCVCNRGWTGPDCSQHD 82
KC CN W GP C+++D
Sbjct: 89 KCTCNINWKGPICNEYD 105
>Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical
protein Y69H2.11 protein.
Length = 887
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 11 GICSNLNKCVCNRGWTGPDC-SQHDALPPSPTPY 109
GI +N C C+ GWTG +C + D P+P Y
Sbjct: 394 GITTNYT-CTCDDGWTGTNCDTMIDFCIPNPCSY 426
>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 5 ARGICSNLNKCVCNRGWTGPDCS 73
A G N CVC GW G DCS
Sbjct: 1414 ANGGFLNNGVCVCRAGWVGTDCS 1436
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +2
Query: 41 CNRGWTGPDCSQHDALPPSPTP 106
C GWTG C P P P
Sbjct: 58 CENGWTGDGCKNPICTDPKPAP 79
>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 5 ARGICSNLNKCVCNRGWTGPDCS 73
A G N CVC GW G DCS
Sbjct: 1414 ANGGFLNNGVCVCRAGWVGTDCS 1436
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +2
Query: 41 CNRGWTGPDCSQHDALPPSPTP 106
C GWTG C P P P
Sbjct: 58 CENGWTGDGCKNPICTDPKPAP 79
>Z75553-4|CAA99946.1| 389|Caenorhabditis elegans Hypothetical
protein ZC443.4 protein.
Length = 389
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 83 ALPPSPTPYVPENATKAAYNMTKK-ETPYGESIPVSEPLV 199
AL P P +PE ATK YN K + P E PV++ +V
Sbjct: 180 ALIPGEGP-IPERATKVYYNAVKSVQAPTPEQAPVAQDVV 218
>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 5 ARGICSNLNKCVCNRGWTGPDCS 73
A G N CVC GW G DCS
Sbjct: 1414 ANGGFLNNGVCVCRAGWVGTDCS 1436
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +2
Query: 41 CNRGWTGPDCSQHDALPPSPTP 106
C GWTG C P P P
Sbjct: 58 CENGWTGDGCKNPICTDPKPAP 79
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +2
Query: 5 ARGICS-NLNKCVCNRGWTGPDCSQ 76
A G C+ + +C CN G+TGP C Q
Sbjct: 1432 ANGHCNASSGECKCNLGFTGPSCEQ 1456
Score = 29.5 bits (63), Expect = 1.8
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 32 KCVCNRGWTGPDC 70
+C C GWTGPDC
Sbjct: 1056 ECRCPAGWTGPDC 1068
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = +2
Query: 11 GICSNLN-KCVCNRGWTGPDC 70
G C+ N C C GWTGP C
Sbjct: 1134 GECNKENGDCECIDGWTGPSC 1154
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +2
Query: 5 ARGICS-NLNKCVCNRGWTGPDCSQ 76
A G C+ + +C CN G+TGP C Q
Sbjct: 1432 ANGHCNASSGECKCNLGFTGPSCEQ 1456
Score = 29.5 bits (63), Expect = 1.8
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 32 KCVCNRGWTGPDC 70
+C C GWTGPDC
Sbjct: 1056 ECRCPAGWTGPDC 1068
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = +2
Query: 11 GICSNLN-KCVCNRGWTGPDC 70
G C+ N C C GWTGP C
Sbjct: 1134 GECNKENGDCECIDGWTGPSC 1154
>Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical
protein F33C8.1b protein.
Length = 1234
Score = 29.9 bits (64), Expect = 1.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 11 GICSNLNKCVCNRGWTGPDC 70
G+C N CVC++GW G C
Sbjct: 73 GVCLN-KACVCSKGWYGSQC 91
>Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical
protein F33C8.1a protein.
Length = 1271
Score = 29.9 bits (64), Expect = 1.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 11 GICSNLNKCVCNRGWTGPDC 70
G+C N CVC++GW G C
Sbjct: 73 GVCLN-KACVCSKGWYGSQC 91
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 29.9 bits (64), Expect = 1.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 35 CVCNRGWTGPDC 70
CVC GWTGP C
Sbjct: 2813 CVCTDGWTGPQC 2824
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 29.9 bits (64), Expect = 1.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 35 CVCNRGWTGPDC 70
CVC GWTGP C
Sbjct: 3397 CVCTDGWTGPQC 3408
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 29.9 bits (64), Expect = 1.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 35 CVCNRGWTGPDC 70
CVC GWTGP C
Sbjct: 2813 CVCTDGWTGPQC 2824
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.9 bits (64), Expect = 1.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 35 CVCNRGWTGPDC 70
CVC GWTGP C
Sbjct: 3397 CVCTDGWTGPQC 3408
>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
preproprotein protein.
Length = 1042
Score = 29.9 bits (64), Expect = 1.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 2 SARGICSNLNKCVCNRGWTGPDC 70
S G C+ +CVC GW+G C
Sbjct: 676 SGHGHCTTTARCVCFNGWSGVAC 698
>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
protein Y37D8A.13 protein.
Length = 1042
Score = 29.9 bits (64), Expect = 1.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 2 SARGICSNLNKCVCNRGWTGPDC 70
S G C+ +CVC GW+G C
Sbjct: 676 SGHGHCTTTARCVCFNGWSGVAC 698
>AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin
protein.
Length = 1329
Score = 29.9 bits (64), Expect = 1.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 11 GICSNLNKCVCNRGWTGPDC 70
G+C N CVC++GW G C
Sbjct: 73 GVCLN-KACVCSKGWYGSQC 91
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 29.9 bits (64), Expect = 1.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 35 CVCNRGWTGPDC 70
CVC GWTGP C
Sbjct: 3397 CVCTDGWTGPQC 3408
>Z74030-19|CAA98449.2| 841|Caenorhabditis elegans Hypothetical
protein F28H7.10a protein.
Length = 841
Score = 29.1 bits (62), Expect = 2.4
Identities = 21/67 (31%), Positives = 29/67 (43%)
Frame = -2
Query: 582 FLLILKSSARICTANYTIVSRGNINRNSYE*PENININ*SVRTLVVRSFSFPNLSICDTF 403
F LI S R TA I G+ N E P + + + T+ S + +S CD F
Sbjct: 632 FYLIFTSCERDSTAIKKIDPMGSEFNNIMENPVDALLRTFIMTIGEFSVLYREMSACDNF 691
Query: 402 CKYWMQW 382
WM+W
Sbjct: 692 ---WMKW 695
>Z72508-10|CAA96644.2| 841|Caenorhabditis elegans Hypothetical
protein F28H7.10a protein.
Length = 841
Score = 29.1 bits (62), Expect = 2.4
Identities = 21/67 (31%), Positives = 29/67 (43%)
Frame = -2
Query: 582 FLLILKSSARICTANYTIVSRGNINRNSYE*PENININ*SVRTLVVRSFSFPNLSICDTF 403
F LI S R TA I G+ N E P + + + T+ S + +S CD F
Sbjct: 632 FYLIFTSCERDSTAIKKIDPMGSEFNNIMENPVDALLRTFIMTIGEFSVLYREMSACDNF 691
Query: 402 CKYWMQW 382
WM+W
Sbjct: 692 ---WMKW 695
>U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical
protein F55G1.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 20 SNLNKCVCNRGWTGPDCSQHDALPPSPTP 106
+++ C C G+TG DC+ + P SP P
Sbjct: 79 NDIPTCTCAVGYTGTDCTMLTSDPCSPQP 107
>Z35604-2|CAA84677.1| 809|Caenorhabditis elegans Hypothetical
protein ZK1058.2 protein.
Length = 809
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 11 GICSNLNKCVCNRGWTGPDC 70
G C N KC+C GWTG C
Sbjct: 582 GEC-NCGKCICAPGWTGRAC 600
>X77495-1|CAA54629.1| 402|Caenorhabditis elegans lag-2 protein.
Length = 402
Score = 28.7 bits (61), Expect = 3.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 2 SARGICSNLNKCVCNRGWTGPDCSQ 76
+AR C + + C+ GW GP C Q
Sbjct: 144 AARKRCDAMGRLRCDIGWMGPHCGQ 168
>U19744-1|AAA85704.1| 809|Caenorhabditis elegans integrin beta
pat-3 protein.
Length = 809
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 11 GICSNLNKCVCNRGWTGPDC 70
G C N KC+C GWTG C
Sbjct: 582 GEC-NCGKCICAPGWTGRAC 600
>AC024205-1|AAF36047.1| 402|Caenorhabditis elegans Lin-12 and glp-1
phenotype protein2 protein.
Length = 402
Score = 28.7 bits (61), Expect = 3.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 2 SARGICSNLNKCVCNRGWTGPDCSQ 76
+AR C + + C+ GW GP C Q
Sbjct: 144 AARKRCDAMGRLRCDIGWMGPHCGQ 168
>Z49072-4|CAA88882.4| 414|Caenorhabditis elegans Hypothetical
protein T24A11.3 protein.
Length = 414
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 20 SNLNKCVCNRGWTGPDCSQHDALPPSP 100
+N N C C G GPDC + L PSP
Sbjct: 284 NNCNVCRCPEGLGGPDCGR---LQPSP 307
>Z73911-8|CAL64005.1| 367|Caenorhabditis elegans Hypothetical
protein T12A7.2b protein.
Length = 367
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 32 KCVCNRGWTGPDCSQHDALPPS 97
KC C G+TGP C+ D P+
Sbjct: 170 KCACYEGFTGPACTICDGTVPT 191
>Z73911-7|CAA98142.2| 483|Caenorhabditis elegans Hypothetical
protein T12A7.2a protein.
Length = 483
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 32 KCVCNRGWTGPDCSQHDALPPS 97
KC C G+TGP C+ D P+
Sbjct: 170 KCACYEGFTGPACTICDGTVPT 191
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 513 YSPYLLSCNWLYRSEHCFSKSIKI 584
Y+ YLL + RSEHC S+ +K+
Sbjct: 439 YNTYLLHRDLFSRSEHCLSQVVKL 462
>Z73972-6|CAI46600.1| 262|Caenorhabditis elegans Hypothetical
protein F15H10.10 protein.
Length = 262
Score = 27.5 bits (58), Expect = 7.4
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +2
Query: 326 LPLNRPITFKSTSESNNKIHCIQYLQKVSQMLKFGKENERTTNVRTD*LIFIFSGYSY 499
+PLN ST E+ N + C Q +S LK K + V T I++ SGY Y
Sbjct: 135 IPLNNS-KLLSTVEATN-VACFQSKAAISFKLKIPKVEKMLIKVCTSYEIYMNSGYLY 190
>Z67756-1|CAA91762.1| 157|Caenorhabditis elegans Hypothetical
protein R07A4.2 protein.
Length = 157
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -3
Query: 446 YVRFLSQI*ASVTLSANTGC--NGSY-YCFQRYF*KL*VYLVVTFN 318
+++ L I + LSAN C N + YC +RYF V+ ++ FN
Sbjct: 20 FLKILQLIFGFINLSANYWCYPNQHFLYCGERYFTSSQVFQLIVFN 65
>U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical
protein M02D8.3 protein.
Length = 915
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 272 VDKWLPKYVSKNFNQFASFRLQFSKLEVPILGWTHHTVFPFW 147
+D+W +V++ + A +RLQ + L + T FPFW
Sbjct: 786 LDEWATSFVTEEELE-ALYRLQLASLRLECYSVTLKDSFPFW 826
>Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical protein
C49C3.4 protein.
Length = 1566
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +2
Query: 20 SNLNKCVCNRGWTGPDCSQHDALPPSPTPYVPENA 124
+ L C+C+ G++GP C + P +NA
Sbjct: 1088 TKLFSCICDPGFSGPSCEIVTCTNQNTDPLAKDNA 1122
>Z74042-2|CAA98528.2| 379|Caenorhabditis elegans Hypothetical
protein T11F9.3 protein.
Length = 379
Score = 27.1 bits (57), Expect = 9.8
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 20 SNLNKCVCNRGWTGPDCSQHDAL 88
+N +C+C G+ G C QH+ +
Sbjct: 227 ANCEECLCTDGFNGQLCDQHEGV 249
>U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical
protein F47C12.1 protein.
Length = 1827
Score = 27.1 bits (57), Expect = 9.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 32 KCVCNRGWTGPDCSQH 79
KC C GW GP+C ++
Sbjct: 1810 KCQCVPGWEGPNCDKN 1825
>AJ561210-1|CAD99212.1| 151|Caenorhabditis elegans NAS-20 protein
protein.
Length = 151
Score = 27.1 bits (57), Expect = 9.8
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2
Query: 20 SNLNKCVCNRGWTGPDCSQHDAL 88
+N +C+C G+ G C QH+ +
Sbjct: 70 ANCEECLCTDGFNGQLCDQHEGV 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,904,606
Number of Sequences: 27780
Number of extensions: 257222
Number of successful extensions: 1062
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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