Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1889
(619 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 310 3e-86
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 310 3e-86
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 310 3e-86
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 292 5e-81
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 24 4.5
AY330181-1|AAQ16287.1| 156|Anopheles gambiae odorant-binding pr... 23 6.0
EF519478-1|ABP73565.1| 165|Anopheles gambiae CTLMA2 protein. 23 7.9
AY659931-1|AAT51799.1| 167|Anopheles gambiae lysozyme i-1 protein. 23 7.9
AY578798-1|AAT07303.1| 356|Anopheles gambiae baboon protein. 23 7.9
AY062204-1|AAL58565.1| 150|Anopheles gambiae cytochrome P450 CY... 23 7.9
AY062200-1|AAL58561.1| 151|Anopheles gambiae cytochrome P450 CY... 23 7.9
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 310 bits (760), Expect = 3e-86
Identities = 154/179 (86%), Positives = 155/179 (86%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 436 TQIMFETFNTPAMYVAIQAVLSLVRVRSYHPYRAGLPATVSSTPVPIYQKDTHFPHAIL 612
TQIMFETFNTPAMYVAIQAVLSL VS T VPIY+ PHAIL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYE-GYALPHAIL 177
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 310 bits (760), Expect = 3e-86
Identities = 154/179 (86%), Positives = 155/179 (86%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 436 TQIMFETFNTPAMYVAIQAVLSLVRVRSYHPYRAGLPATVSSTPVPIYQKDTHFPHAIL 612
TQIMFETFNTPAMYVAIQAVLSL VS T VPIY+ PHAIL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYE-GYALPHAIL 177
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 310 bits (760), Expect = 3e-86
Identities = 154/179 (86%), Positives = 155/179 (86%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 436 TQIMFETFNTPAMYVAIQAVLSLVRVRSYHPYRAGLPATVSSTPVPIYQKDTHFPHAIL 612
TQIMFETFNTPAMYVAIQAVLSL VS T VPIY+ PHAIL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYE-GYALPHAIL 177
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 292 bits (717), Expect = 5e-81
Identities = 143/179 (79%), Positives = 150/179 (83%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 255
MCD++ ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD+YVGDEAQ
Sbjct: 1 MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKM 435
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPK+NREKM
Sbjct: 61 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKSNREKM 120
Query: 436 TQIMFETFNTPAMYVAIQAVLSLVRVRSYHPYRAGLPATVSSTPVPIYQKDTHFPHAIL 612
TQIMFETF PA+YVAIQAVLSL VS T VPIY+ PHAIL
Sbjct: 121 TQIMFETFAAPAVYVAIQAVLSLYASGRTTGVVLDSGDGVSHT-VPIYE-GYALPHAIL 177
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 23.8 bits (49), Expect = 4.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 183 GKAPPSGRDGRYGTEGL 233
G+ P GRDG +G GL
Sbjct: 344 GQPGPRGRDGNFGPVGL 360
>AY330181-1|AAQ16287.1| 156|Anopheles gambiae odorant-binding
protein AgamOBP55 protein.
Length = 156
Score = 23.4 bits (48), Expect = 6.0
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 70 FKMCDEEVAALVVDNGSGMC 129
+++C E+ A +DNG+ MC
Sbjct: 42 YRVCHEQHATPQMDNGTVMC 61
>EF519478-1|ABP73565.1| 165|Anopheles gambiae CTLMA2 protein.
Length = 165
Score = 23.0 bits (47), Expect = 7.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2
Query: 189 PSHDRGEHGARSIISC 142
P+H RGEHG + C
Sbjct: 121 PNHARGEHGQQPAERC 136
>AY659931-1|AAT51799.1| 167|Anopheles gambiae lysozyme i-1 protein.
Length = 167
Score = 23.0 bits (47), Expect = 7.9
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = -2
Query: 507 YKREHG--LNGDVHGGRVECFEH 445
Y R+ G NGD GR++CF+H
Sbjct: 109 YMRKFGQDCNGD---GRIDCFDH 128
>AY578798-1|AAT07303.1| 356|Anopheles gambiae baboon protein.
Length = 356
Score = 23.0 bits (47), Expect = 7.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -2
Query: 147 SCETGLAHTGAIVYYQRGNFFVAHLELVFN*IVLL*INKLTCYCTASL 4
S TGLAH + RG +AH +L I++ + LTC C L
Sbjct: 162 SIATGLAHLHMDIVGTRGKPAIAHRDLKSKNILVK--SNLTC-CIGDL 206
>AY062204-1|AAL58565.1| 150|Anopheles gambiae cytochrome P450
CYP4C28 protein.
Length = 150
Score = 23.0 bits (47), Expect = 7.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 258 QKRYPDPQIPHRTRNRH 308
+K YPD +P + NRH
Sbjct: 117 EKFYPDRFLPENSTNRH 133
>AY062200-1|AAL58561.1| 151|Anopheles gambiae cytochrome P450
CYP4G17 protein.
Length = 151
Score = 23.0 bits (47), Expect = 7.9
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 270 PDPQIPHRTRNRH 308
PD +P RT+NRH
Sbjct: 122 PDNFLPERTQNRH 134
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 754,992
Number of Sequences: 2352
Number of extensions: 16977
Number of successful extensions: 59
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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