Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1886
(562 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 296 8e-81
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 296 8e-81
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 296 8e-81
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 294 3e-80
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 269 1e-72
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 269 1e-72
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 268 2e-72
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 268 2e-72
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 266 6e-72
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 266 7e-72
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 263 7e-71
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 263 7e-71
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 246 1e-65
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 244 3e-65
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 225 1e-59
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 200 4e-52
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 142 1e-34
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 141 3e-34
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 140 6e-34
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 139 1e-33
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 139 1e-33
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 136 8e-33
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 122 1e-28
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 122 1e-28
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 79 2e-15
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 79 2e-15
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.32
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 2.3
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 2.3
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 2.3
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 4.0
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 5.3
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 5.3
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 5.3
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 5.3
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 5.3
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 5.3
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 5.3
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 5.3
U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone... 27 9.2
AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear recep... 27 9.2
AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear recep... 27 9.2
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 296 bits (726), Expect = 8e-81
Identities = 131/163 (80%), Positives = 145/163 (88%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 252 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 431
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 432 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGQ 560
RIR+LAD CTGLQGFL+FH LLMERLSVDYG+
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGK 163
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 296 bits (726), Expect = 8e-81
Identities = 131/163 (80%), Positives = 145/163 (88%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 252 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 431
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 432 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGQ 560
RIR+LAD CTGLQGFL+FH LLMERLSVDYG+
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGK 163
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 296 bits (726), Expect = 8e-81
Identities = 131/163 (80%), Positives = 145/163 (88%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 252 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 431
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 432 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGQ 560
RIR+LAD CTGLQGFL+FH LLMERLSVDYG+
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGK 163
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 294 bits (721), Expect = 3e-80
Identities = 130/162 (80%), Positives = 144/162 (88%)
Frame = +3
Query: 75 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 254
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 255 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 434
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 435 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGQ 560
IR+LAD CTGLQGFL+FH LLMERLSVDYG+
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGK 162
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 269 bits (659), Expect = 1e-72
Identities = 120/163 (73%), Positives = 139/163 (85%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 252 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 431
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 432 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGQ 560
RIR+LAD C+GLQGF +FH LLMERLSVDYG+
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGK 161
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 269 bits (659), Expect = 1e-72
Identities = 120/163 (73%), Positives = 139/163 (85%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 252 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 431
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 432 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGQ 560
RIR+LAD C+GLQGF +FH LLMERLSVDYG+
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGK 161
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 268 bits (656), Expect = 2e-72
Identities = 119/163 (73%), Positives = 139/163 (85%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 252 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 431
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 432 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGQ 560
RIR+LAD C+GLQGF +FH LLMERLSVDYG+
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGK 161
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 268 bits (656), Expect = 2e-72
Identities = 119/163 (73%), Positives = 139/163 (85%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 252 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 431
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 432 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGQ 560
RIR+LAD C+GLQGF +FH LLMERLSVDYG+
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGK 161
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 266 bits (653), Expect = 6e-72
Identities = 117/164 (71%), Positives = 137/164 (83%)
Frame = +3
Query: 69 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 248
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 249 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 428
KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 429 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGQ 560
DR+R+L + C GLQGFL+FH LLMERLSVDYG+
Sbjct: 125 DRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGK 168
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 266 bits (652), Expect = 7e-72
Identities = 116/163 (71%), Positives = 137/163 (84%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 252 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 431
HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 432 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGQ 560
R+R+L ++C LQGFLIFH L+MERLS+DYG+
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGK 163
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 263 bits (644), Expect = 7e-71
Identities = 117/163 (71%), Positives = 137/163 (84%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 252 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 431
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 432 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGQ 560
RIR+LAD C+GLQGF +FH LLMERLSVDYG+
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGK 161
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 263 bits (644), Expect = 7e-71
Identities = 117/163 (71%), Positives = 137/163 (84%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 252 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 431
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 432 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGQ 560
RIR+LAD C+GLQGF +FH LLMERLSVDYG+
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGK 161
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 246 bits (601), Expect = 1e-65
Identities = 110/163 (67%), Positives = 128/163 (78%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 252 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 431
HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 432 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGQ 560
RIR+LA+ C GLQGF +FH +LMERLS +YG+
Sbjct: 118 RIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGK 160
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 244 bits (598), Expect = 3e-65
Identities = 109/162 (67%), Positives = 129/162 (79%)
Frame = +3
Query: 75 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 254
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 255 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 434
VPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 435 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGQ 560
+++LA+ C GLQGF+IFH LLMERLS +YG+
Sbjct: 128 VKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGK 169
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 225 bits (551), Expect = 1e-59
Identities = 99/162 (61%), Positives = 122/162 (75%)
Frame = +3
Query: 75 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 254
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 255 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 434
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 435 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGQ 560
IRK + C GLQGFL+FH LLMERLSV++G+
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGK 166
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 200 bits (489), Expect = 4e-52
Identities = 89/141 (63%), Positives = 109/141 (77%)
Frame = +3
Query: 138 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 317
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 318 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXX 497
YR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFH
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 498 XXXXXXXXXLLMERLSVDYGQ 560
LLMERLS +YG+
Sbjct: 121 GGTGSGFLSLLMERLSTEYGK 141
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 142 bits (345), Expect = 1e-34
Identities = 70/161 (43%), Positives = 95/161 (59%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 252 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 431
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 432 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 554
+RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 119 VVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 141 bits (342), Expect = 3e-34
Identities = 70/161 (43%), Positives = 96/161 (59%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 252 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 431
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 432 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 554
IRK A+ C LQGF + H LL+ ++ +Y
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 140 bits (339), Expect = 6e-34
Identities = 69/161 (42%), Positives = 96/161 (59%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 252 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 431
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 432 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 554
IRK A+ C LQGF + H LL+ ++ ++
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEF 159
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 139 bits (337), Expect = 1e-33
Identities = 68/161 (42%), Positives = 95/161 (59%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 252 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 431
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 432 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 554
+RK A+ LQGF + H LL+ ++ +Y
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 139 bits (337), Expect = 1e-33
Identities = 68/161 (42%), Positives = 95/161 (59%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 252 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 431
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 432 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 554
+RK A+ LQGF + H LL+ ++ +Y
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 136 bits (330), Expect = 8e-33
Identities = 67/161 (41%), Positives = 91/161 (56%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 252 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 431
+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 432 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 554
+RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 119 VVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEY 159
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 122 bits (295), Expect = 1e-28
Identities = 63/161 (39%), Positives = 90/161 (55%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 252 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 431
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 432 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 554
IR+ A+ L+GF + H LL+ +L +Y
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEY 159
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 122 bits (295), Expect = 1e-28
Identities = 63/161 (39%), Positives = 90/161 (55%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 252 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 431
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 432 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 554
IR+ A+ L+GF + H LL+ +L +Y
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEY 159
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 79.4 bits (187), Expect = 2e-15
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 3/156 (1%)
Frame = +3
Query: 84 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 263
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 264 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 434
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 435 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 542
I + A+ L G L H LL+ERL
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERL 159
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 79.4 bits (187), Expect = 2e-15
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 3/156 (1%)
Frame = +3
Query: 84 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 263
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 264 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 434
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 435 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 542
I + A+ L G L H LL+ERL
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERL 159
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.32
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 100 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 255
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 114 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 293
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 294 VDE 302
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 114 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 293
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 294 VDE 302
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 114 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 293
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 294 VDE 302
DE
Sbjct: 116 ADE 118
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 362 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 267
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 291 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 434
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 291 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 434
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 291 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 434
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 291 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 434
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 291 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 434
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 291 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 434
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 291 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 434
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 291 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 434
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
>U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 44 protein.
Length = 428
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 222 TFFSETGAGKHVPRAVFVDLEPTVVD 299
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 428
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 222 TFFSETGAGKHVPRAVFVDLEPTVVD 299
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 423
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 222 TFFSETGAGKHVPRAVFVDLEPTVVD 299
T ++ TG+GK++ F DL P + D
Sbjct: 131 TTYTSTGSGKNIEYITFFDLTPIIKD 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,388,458
Number of Sequences: 27780
Number of extensions: 296484
Number of successful extensions: 770
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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