Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1885
         (716 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X78421-1|CAA55186.1|  805|Drosophila melanogaster E2F protein.         30   3.6  
U10184-1|AAA19003.1|  805|Drosophila melanogaster drosE2F1 protein.    30   3.6  
BT016096-1|AAV36981.1|  805|Drosophila melanogaster LD35741p pro...    30   3.6  
AE014297-3023|AAN13879.1|  805|Drosophila melanogaster CG6376-PC...    30   3.6  
AE014297-3022|AAN13878.1|  805|Drosophila melanogaster CG6376-PB...    30   3.6  
AE014297-3021|AAF55904.1|  805|Drosophila melanogaster CG6376-PA...    30   3.6  
AB011813-2|BAA32746.1|  805|Drosophila melanogaster E2F protein.       30   3.6  

>X78421-1|CAA55186.1|  805|Drosophila melanogaster E2F protein.
          Length = 805

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +2

Query: 113 LLFQNQDHVVE-KRASHR-SVTTRYMYSRNNIQ*NISVLERRGARNEASRCG 262
           LL ++ D VV+   AS+R  V  R +Y   N+   I++LE++   N   RCG
Sbjct: 269 LLQESPDGVVDLNEASNRLHVQKRRIYDITNVLEGINILEKKSKNNIQWRCG 320


>U10184-1|AAA19003.1|  805|Drosophila melanogaster drosE2F1 protein.
          Length = 805

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +2

Query: 113 LLFQNQDHVVE-KRASHR-SVTTRYMYSRNNIQ*NISVLERRGARNEASRCG 262
           LL ++ D VV+   AS+R  V  R +Y   N+   I++LE++   N   RCG
Sbjct: 269 LLQESPDGVVDLNEASNRLHVQKRRIYDITNVLEGINILEKKSKNNIQWRCG 320


>BT016096-1|AAV36981.1|  805|Drosophila melanogaster LD35741p
           protein.
          Length = 805

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +2

Query: 113 LLFQNQDHVVE-KRASHR-SVTTRYMYSRNNIQ*NISVLERRGARNEASRCG 262
           LL ++ D VV+   AS+R  V  R +Y   N+   I++LE++   N   RCG
Sbjct: 269 LLQESPDGVVDLNEASNRLHVQKRRIYDITNVLEGINILEKKSKNNIQWRCG 320


>AE014297-3023|AAN13879.1|  805|Drosophila melanogaster CG6376-PC,
           isoform C protein.
          Length = 805

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +2

Query: 113 LLFQNQDHVVE-KRASHR-SVTTRYMYSRNNIQ*NISVLERRGARNEASRCG 262
           LL ++ D VV+   AS+R  V  R +Y   N+   I++LE++   N   RCG
Sbjct: 269 LLQESPDGVVDLNEASNRLHVQKRRIYDITNVLEGINILEKKSKNNIQWRCG 320


>AE014297-3022|AAN13878.1|  805|Drosophila melanogaster CG6376-PB,
           isoform B protein.
          Length = 805

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +2

Query: 113 LLFQNQDHVVE-KRASHR-SVTTRYMYSRNNIQ*NISVLERRGARNEASRCG 262
           LL ++ D VV+   AS+R  V  R +Y   N+   I++LE++   N   RCG
Sbjct: 269 LLQESPDGVVDLNEASNRLHVQKRRIYDITNVLEGINILEKKSKNNIQWRCG 320


>AE014297-3021|AAF55904.1|  805|Drosophila melanogaster CG6376-PA,
           isoform A protein.
          Length = 805

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +2

Query: 113 LLFQNQDHVVE-KRASHR-SVTTRYMYSRNNIQ*NISVLERRGARNEASRCG 262
           LL ++ D VV+   AS+R  V  R +Y   N+   I++LE++   N   RCG
Sbjct: 269 LLQESPDGVVDLNEASNRLHVQKRRIYDITNVLEGINILEKKSKNNIQWRCG 320


>AB011813-2|BAA32746.1|  805|Drosophila melanogaster E2F protein.
          Length = 805

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +2

Query: 113 LLFQNQDHVVE-KRASHR-SVTTRYMYSRNNIQ*NISVLERRGARNEASRCG 262
           LL ++ D VV+   AS+R  V  R +Y   N+   I++LE++   N   RCG
Sbjct: 269 LLQESPDGVVDLNEASNRLHVQKRRIYDITNVLEGINILEKKSKNNIQWRCG 320


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,194,356
Number of Sequences: 53049
Number of extensions: 737572
Number of successful extensions: 1600
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1600
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)