Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1885
         (716 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   1.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   1.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.2  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    23   2.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.8  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.8  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   8.8  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.8  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 480 VPIFLNTYLSNIHDLPPRLRNSI 548
           VP+ +  Y+  IHDL  R+  +I
Sbjct: 315 VPLHMQKYVQMIHDLHTRISTAI 337


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 480 VPIFLNTYLSNIHDLPPRLRNSI 548
           VP+ +  Y+  IHDL  R+  +I
Sbjct: 315 VPLHMQKYVQMIHDLHTRISTAI 337


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -1

Query: 407 YSCR-CSNFFSKHPYKRVN**KRIENKNVVNVAQPLIYALSRNRCFACRLR 258
           +SC  C  FF +   +++    R   KN     Q  I  ++RNRC  CRL+
Sbjct: 82  HSCEGCKGFFRRSIQQKIQ--YRPCTKN----QQCSILRINRNRCQYCRLK 126


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 347 KRIENKNVVNVAQPLIYALSRNRCFACRLR 258
           ++I+ +      Q  I  ++RNRC  CRL+
Sbjct: 48  QKIQYRPCTKNQQCSILRINRNRCQYCRLK 77


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 449 LHTNALSYPLGCNDYSCRC 393
           L+   +   LG N +SCRC
Sbjct: 912 LNARLVELSLGSNPWSCRC 930


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +2

Query: 260 GVDTRNTCS*ITHILRAGLHSLHSYFLYVFISSLSC 367
           GV   +TC   T+ L   LH + +    + +S L C
Sbjct: 18  GVHILDTCGRDTYALNQSLHFVRASLSNLDMSVLEC 53


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -1

Query: 425 PLGCNDYSCRCSNFFSKHPYKR 360
           P+GC D S  C     K+P  R
Sbjct: 618 PIGCKDASSYCGLRDRKYPDAR 639


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +2

Query: 260 GVDTRNTCS*ITHILRAGLHSLHSYFLYVFISSLSC 367
           GV   +TC   T+ L   LH + +    + +S L C
Sbjct: 108 GVHILDTCGRDTYALNQSLHFVRASLSNLDMSVLEC 143


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,611
Number of Sequences: 438
Number of extensions: 5086
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)