Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1884
(577 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55072 Cluster: Transitional endoplasmic reticulum ATPa... 137 2e-31
UniRef50_A4ICJ9 Cluster: Transitional endoplasmic reticulum ATPa... 91 2e-17
UniRef50_Q1JSD1 Cluster: Transitional endoplasmic reticulum ATPa... 62 9e-09
UniRef50_A7AVE1 Cluster: Cell division cycle protein ATPase, put... 61 2e-08
UniRef50_Q4MZM6 Cluster: Cell division cycle protein 48, putativ... 56 6e-07
UniRef50_Q4UBT9 Cluster: Cell divison cycle CDC48 homologue, put... 46 6e-04
UniRef50_A5KAB5 Cluster: Cell division cycle ATPase, putative; n... 44 0.003
UniRef50_Q4YQQ6 Cluster: Cell division cycle ATPase, putative; n... 41 0.024
UniRef50_Q8TA24 Cluster: Putative transitional endoplasmic retic... 40 0.032
UniRef50_Q7QWL6 Cluster: GLP_762_31096_33708; n=1; Giardia lambl... 38 0.22
UniRef50_Q6A846 Cluster: Putative ATP-dependent DNA helicase; n=... 36 0.52
UniRef50_A4JRK0 Cluster: Transcriptional regulator, Fis family; ... 36 0.52
UniRef50_Q1ENB0 Cluster: Isopentenyl-diphosphate delta-isomerase... 34 2.1
UniRef50_Q00T93 Cluster: 26S proteasome regulatory complex, ATPa... 34 2.1
UniRef50_Q82QP8 Cluster: Putative uncharacterized protein; n=1; ... 33 3.6
UniRef50_A5NV47 Cluster: LigA; n=1; Methylobacterium sp. 4-46|Re... 33 3.6
UniRef50_A1SE84 Cluster: NADH:flavin oxidoreductase/NADH oxidase... 33 3.6
UniRef50_A0EEE7 Cluster: Chromosome undetermined scaffold_91, wh... 33 3.6
UniRef50_UPI0000DD7F32 Cluster: PREDICTED: hypothetical protein ... 33 6.4
UniRef50_UPI0000E8193A Cluster: PREDICTED: similar to Chromosome... 32 8.4
UniRef50_UPI0000DD7D03 Cluster: PREDICTED: hypothetical protein;... 32 8.4
UniRef50_UPI00015A58A4 Cluster: UPI00015A58A4 related cluster; n... 32 8.4
UniRef50_Q7XKG5 Cluster: OSJNBb0065J09.4 protein; n=4; Oryza sat... 32 8.4
UniRef50_A1CKA8 Cluster: Cyclin; n=6; Trichocomaceae|Rep: Cyclin... 32 8.4
UniRef50_Q3MIN7 Cluster: Ral guanine nucleotide dissociation sti... 32 8.4
UniRef50_Q8TC90 Cluster: Uncharacterized protein C12orf12; n=6; ... 32 8.4
>UniRef50_P55072 Cluster: Transitional endoplasmic reticulum ATPase
(TER ATPase) (15S Mg(2+)- ATPase p97 subunit); n=169;
Eukaryota|Rep: Transitional endoplasmic reticulum ATPase
(TER ATPase) (15S Mg(2+)- ATPase p97 subunit) - Homo
sapiens (Human)
Length = 806
Score = 137 bits (331), Expect = 2e-31
Identities = 74/121 (61%), Positives = 85/121 (70%), Gaps = 2/121 (1%)
Frame = -3
Query: 575 TEICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFALR 396
TEICQRACKLAIR++IE+EI RER R M+++E+DPVPEI R HFEEAM+FA R
Sbjct: 688 TEICQRACKLAIRESIESEIRRERERQTNPS--AMEVEEDDPVPEIRRDHFEEAMRFARR 745
Query: 395 SVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXGDQP--TFQEEGGDDDL 222
SVSDNDIRKYEMFAQTLQQSRGFG +FRFP+ G + E DDDL
Sbjct: 746 SVSDNDIRKYEMFAQTLQQSRGFG-SFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDL 804
Query: 221 Y 219
Y
Sbjct: 805 Y 805
>UniRef50_A4ICJ9 Cluster: Transitional endoplasmic reticulum ATPase,
putative; n=2; Leishmania|Rep: Transitional endoplasmic
reticulum ATPase, putative - Leishmania infantum
Length = 690
Score = 91.1 bits (216), Expect = 2e-17
Identities = 47/84 (55%), Positives = 58/84 (69%)
Frame = -3
Query: 569 ICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFALRSV 390
ICQRACK+AIR++I EI E + D+D PVPEI+RAH EEAM+ A RSV
Sbjct: 584 ICQRACKMAIRESINKEIQLEELKKIGQLDENADID---PVPEITRAHVEEAMRGARRSV 640
Query: 389 SDNDIRKYEMFAQTLQQSRGFGTN 318
SD DIR+Y+MF +LQQSR FG +
Sbjct: 641 SDADIRRYDMFKTSLQQSRTFGAS 664
>UniRef50_Q1JSD1 Cluster: Transitional endoplasmic reticulum ATPase;
n=1; Toxoplasma gondii|Rep: Transitional endoplasmic
reticulum ATPase - Toxoplasma gondii
Length = 792
Score = 62.1 bits (144), Expect = 9e-09
Identities = 34/81 (41%), Positives = 50/81 (61%)
Frame = -3
Query: 575 TEICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFALR 396
TEICQRA K A+R++I+AE+ R R + E+DPVP IS+ HF+EA K A R
Sbjct: 687 TEICQRAAKNAVRESIQAEVARGRP---------LAEGEKDPVPFISKKHFDEAFKGARR 737
Query: 395 SVSDNDIRKYEMFAQTLQQSR 333
SV ++ ++ Y F +++ R
Sbjct: 738 SVPEDMVKVYTQFNSMMKRRR 758
>UniRef50_A7AVE1 Cluster: Cell division cycle protein ATPase,
putative; n=1; Babesia bovis|Rep: Cell division cycle
protein ATPase, putative - Babesia bovis
Length = 922
Score = 60.9 bits (141), Expect = 2e-08
Identities = 36/81 (44%), Positives = 45/81 (55%)
Frame = -3
Query: 572 EICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFALRS 393
EIC RA + AIR++IE EI R R + EEDPVP I+ HF AM A +S
Sbjct: 851 EICHRAAREAIRESIEHEIKRGRR---------LKEGEEDPVPYITNEHFRVAMANARKS 901
Query: 392 VSDNDIRKYEMFAQTLQQSRG 330
V DI++YE F + L S G
Sbjct: 902 VRKEDIKRYEQFKKKLASSTG 922
>UniRef50_Q4MZM6 Cluster: Cell division cycle protein 48, putative;
n=1; Theileria parva|Rep: Cell division cycle protein 48,
putative - Theileria parva
Length = 954
Score = 56.0 bits (129), Expect = 6e-07
Identities = 30/72 (41%), Positives = 45/72 (62%)
Frame = -3
Query: 572 EICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFALRS 393
EIC RA + AIR++IE EI R+R ++ E+DPVP I+ HF+ A++ + +S
Sbjct: 886 EICHRAAREAIRESIEEEIKRKRP---------LEKGEKDPVPFITNKHFQVALRNSRKS 936
Query: 392 VSDNDIRKYEMF 357
V +DI+ YE F
Sbjct: 937 VEQSDIQLYESF 948
>UniRef50_Q4UBT9 Cluster: Cell divison cycle CDC48 homologue,
putative or transitional endoplasmic reticulum ATPase,
putative; n=1; Theileria annulata|Rep: Cell divison
cycle CDC48 homologue, putative or transitional
endoplasmic reticulum ATPase, putative - Theileria
annulata
Length = 905
Score = 46.0 bits (104), Expect = 6e-04
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = -3
Query: 572 EICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMK 408
EIC RA + AIR++IEAEI R+R ++ E+DPVP I+ HF+ A+K
Sbjct: 820 EICHRAAREAIRESIEAEIKRKRP---------LEKGEKDPVPYITNKHFQIALK 865
>UniRef50_A5KAB5 Cluster: Cell division cycle ATPase, putative; n=1;
Plasmodium vivax|Rep: Cell division cycle ATPase,
putative - Plasmodium vivax
Length = 1089
Score = 43.6 bits (98), Expect = 0.003
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = -3
Query: 575 TEICQRACKLAIRQAIEAEIHRE---RSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKF 405
T +CQ A AI++ I R+ R D D DPVP +++ HF+ A K
Sbjct: 1005 TNLCQSAVNEAIKETIRLVSQRKGGPEKRSGAKANGGAD-DHYDPVPTLAKKHFDLAFKN 1063
Query: 404 ALRSVSDNDIRKYEMFAQTL 345
A S+ D+ KYE F + L
Sbjct: 1064 ARISIRPEDVLKYERFKEKL 1083
>UniRef50_Q4YQQ6 Cluster: Cell division cycle ATPase, putative; n=3;
Plasmodium (Vinckeia)|Rep: Cell division cycle ATPase,
putative - Plasmodium berghei
Length = 932
Score = 40.7 bits (91), Expect = 0.024
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Frame = -3
Query: 575 TEICQRACKLAIRQAIEA-EIHRERSRXXXXXXAVMD----MDEEDPVPEISRAHFEEAM 411
T +CQ A AI++ I + + +S ++ DPVP +S+ HF+ A
Sbjct: 845 TNLCQSAVNEAIKETIYLINLKKGKSNKNDKKKKSRGGQNYLENYDPVPTLSKKHFDVAF 904
Query: 410 KFALRSVSDNDIRKYEMFAQTL 345
K A S+ D+ KYE F + L
Sbjct: 905 KNARISIQPEDVLKYEKFKEKL 926
>UniRef50_Q8TA24 Cluster: Putative transitional endoplasmic
reticulum ATPase; n=1; Heterodera glycines|Rep: Putative
transitional endoplasmic reticulum ATPase - Heterodera
glycines (Soybean cyst nematode worm)
Length = 89
Score = 40.3 bits (90), Expect = 0.032
Identities = 27/77 (35%), Positives = 35/77 (45%)
Frame = -3
Query: 362 MFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXGDQPTFQEEGGDDDLYS*TVSRSRPRGI 183
MFAQTLQQ RGFGT+F+FP + DDDLYS +V+ I
Sbjct: 1 MFAQTLQQQRGFGTSFKFPGEGKKSSSGRGGN------EAGNDDDDLYSQSVNIDYSEVI 54
Query: 182 STISIDQN*RPVCLSCV 132
S+ C+ C+
Sbjct: 55 SSDDEQNMSLFNCIGCI 71
>UniRef50_Q7QWL6 Cluster: GLP_762_31096_33708; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_762_31096_33708 - Giardia lamblia
ATCC 50803
Length = 870
Score = 37.5 bits (83), Expect = 0.22
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
Frame = -3
Query: 572 EICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDM--------------DEEDPVPE-- 441
EIC RACK +IR+ +E R S + +D + E+ + E
Sbjct: 719 EICSRACKYSIRENVEG-FSRAMSAFESMKKSWLDSHGGVLTPEKEKEFAEHEEKISERF 777
Query: 440 ----ISRAHFEEAMKFALRSVSDNDIRKYEMFAQTLQQSRGFG 324
IS HFE+A++ + +S+S+ ++R++E+F Q+ G G
Sbjct: 778 SDTSISGRHFEQAIRESRKSISEEEMRRFEVFKQSYSGGIGDG 820
>UniRef50_Q6A846 Cluster: Putative ATP-dependent DNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent DNA
helicase - Propionibacterium acnes
Length = 1061
Score = 36.3 bits (80), Expect = 0.52
Identities = 25/77 (32%), Positives = 38/77 (49%)
Frame = +3
Query: 69 LRHYRIREPAGARRHVGVVGRHAGQTDRTLVLVYRDGGDAPRSRARHSLAVQVVVTPLLL 248
LRH R+ + A R + VV RH G+ D ++ +G RSR H+L+ VT +L
Sbjct: 344 LRHARVADGV-AWRSMAVVTRHGGELDVIATILAAEGIPVLRSRDEHALSDIYAVTHILN 402
Query: 249 ERGLVAR*STRAPCSSR 299
+ ++ A SSR
Sbjct: 403 ALEMAVALASGAQLSSR 419
>UniRef50_A4JRK0 Cluster: Transcriptional regulator, Fis family;
n=1; Burkholderia vietnamiensis G4|Rep: Transcriptional
regulator, Fis family - Burkholderia vietnamiensis
(strain G4 / LMG 22486) (Burkholderiacepacia (strain
R1808))
Length = 148
Score = 36.3 bits (80), Expect = 0.52
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +3
Query: 345 QGLREHLVLADVVVGHGAERELHRLLEV 428
Q L HLVLA + GHG ER+L RL+E+
Sbjct: 27 QSLEYHLVLAAIRAGHGNERQLSRLVEI 54
>UniRef50_Q1ENB0 Cluster: Isopentenyl-diphosphate delta-isomerase II
precursor; n=1; Guillardia theta|Rep:
Isopentenyl-diphosphate delta-isomerase II precursor -
Guillardia theta (Cryptomonas phi)
Length = 215
Score = 34.3 bits (75), Expect = 2.1
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 375 DVVVGHGAERELHRLLEVSAANLRNGVFLVHVHNGSGGLLL 497
D V+GHG+++ H + +SA + F + + NG G LLL
Sbjct: 107 DEVLGHGSKKYCHLMENISAGKALHRAFSIFLFNGRGELLL 147
>UniRef50_Q00T93 Cluster: 26S proteasome regulatory complex, ATPase
RPT1; n=2; Ostreococcus|Rep: 26S proteasome regulatory
complex, ATPase RPT1 - Ostreococcus tauri
Length = 930
Score = 34.3 bits (75), Expect = 2.1
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -3
Query: 455 DPVPEISRAHFEEAMKFALRSVSDNDIRKYEMFAQTLQQSRG 330
D P ++ AHFEEA SVS D +Y+ + L++ RG
Sbjct: 848 DATPRVTAAHFEEAFTKVQPSVSKADHARYDELRRKLRRERG 889
>UniRef50_Q82QP8 Cluster: Putative uncharacterized protein; n=1;
Streptomyces avermitilis|Rep: Putative uncharacterized
protein - Streptomyces avermitilis
Length = 555
Score = 33.5 bits (73), Expect = 3.6
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 240 LLLERGLVAR*STRAPCSSRVCWESEVGSEAAALLQGLRE 359
LL ER L A RA + CWE+E + AAL +G R+
Sbjct: 395 LLAERSLAAYQQLRAAARAADCWETERAAALAALREGTRQ 434
>UniRef50_A5NV47 Cluster: LigA; n=1; Methylobacterium sp. 4-46|Rep:
LigA - Methylobacterium sp. 4-46
Length = 475
Score = 33.5 bits (73), Expect = 3.6
Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 93 PAG--ARRHVGVVGRHAGQTDRTLVLVYRDGGDAPRSR 200
PAG RR G GRH G+ D+ V RD GD PR R
Sbjct: 359 PAGRAVRRCRGGGGRHGGRHDQHAVQPARDAGDPPRGR 396
>UniRef50_A1SE84 Cluster: NADH:flavin oxidoreductase/NADH oxidase;
n=1; Nocardioides sp. JS614|Rep: NADH:flavin
oxidoreductase/NADH oxidase - Nocardioides sp. (strain
BAA-499 / JS614)
Length = 699
Score = 33.5 bits (73), Expect = 3.6
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 273 STRAPCSSRVCWESEVGSEAAALLQGLREHLVLADVVVGHGAERELHRL 419
S +P S W+ E G A++ + EH LA + + HG + RL
Sbjct: 71 SDESPLHSSDIWDGEDGRRHKAMVDAVHEHGALASIELHHGGAHAMRRL 119
>UniRef50_A0EEE7 Cluster: Chromosome undetermined scaffold_91, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_91,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 772
Score = 33.5 bits (73), Expect = 3.6
Identities = 23/89 (25%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = -3
Query: 572 EICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFALRS 393
+ICQ A K A+++ I+ +E ++ + + D P+I+R HFE +++ +S
Sbjct: 670 QICQNAKKAALKE-IQMIDAQENAKGTSK-----NYQQLDSFPQITRQHFETSLQQTQKS 723
Query: 392 VSDNDIRKYEMFAQTL-QQSRGFGTNFRF 309
+ + I + + F ++L QQ + +F+F
Sbjct: 724 YTYHQISQIQGFQKSLVQQQKSNKADFKF 752
>UniRef50_UPI0000DD7F32 Cluster: PREDICTED: hypothetical protein
LOC286077; n=1; Homo sapiens|Rep: PREDICTED:
hypothetical protein LOC286077 - Homo sapiens
Length = 897
Score = 32.7 bits (71), Expect = 6.4
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = +2
Query: 188 PEVASETQFSCTGRRHPPPPGTWAGRPLKYPCPL*LPR 301
P V + T FS R H P P T R + P PL LPR
Sbjct: 312 PGVGAPTPFSFPKRAHLPVPATPGKRTCRRPAPLGLPR 349
>UniRef50_UPI0000E8193A Cluster: PREDICTED: similar to Chromosome 9
open reading frame 40; n=1; Gallus gallus|Rep:
PREDICTED: similar to Chromosome 9 open reading frame 40
- Gallus gallus
Length = 160
Score = 32.3 bits (70), Expect = 8.4
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = -2
Query: 561 ASLQAGHSPGHRGGDPSREESPAASRRCRYG 469
A G PG RGG P E+S AA RR R G
Sbjct: 53 AEAPPGKRPGLRGGSPRGEQSDAAGRRRRRG 83
>UniRef50_UPI0000DD7D03 Cluster: PREDICTED: hypothetical protein;
n=2; Catarrhini|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 132
Score = 32.3 bits (70), Expect = 8.4
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 574 RRYASEPASWPFARPSRRRSIARGVASSKPPLP 476
RR SEP SW +R SR R IA S++ P P
Sbjct: 69 RRRPSEPVSWQLSRRSRPRPIAGRQTSARRPPP 101
>UniRef50_UPI00015A58A4 Cluster: UPI00015A58A4 related cluster; n=1;
Danio rerio|Rep: UPI00015A58A4 UniRef100 entry - Danio
rerio
Length = 426
Score = 32.3 bits (70), Expect = 8.4
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2
Query: 188 PEVASETQFSCTGRRHPPPP 247
P V + SCTGRR PPPP
Sbjct: 190 PPVPEDQNISCTGRRPPPPP 209
>UniRef50_Q7XKG5 Cluster: OSJNBb0065J09.4 protein; n=4; Oryza
sativa|Rep: OSJNBb0065J09.4 protein - Oryza sativa
(Rice)
Length = 185
Score = 32.3 bits (70), Expect = 8.4
Identities = 23/92 (25%), Positives = 41/92 (44%)
Frame = +3
Query: 189 PRSRARHSLAVQVVVTPLLLERGLVAR*STRAPCSSRVCWESEVGSEAAALLQGLREHLV 368
P + R LA ++ + LLL + R+ + G EA A+++ +LV
Sbjct: 37 PPATGRRRLAASLLASQLLLLPAAATSVAGAFEFDLRITVPEQSGEEAEAVVKLHARNLV 96
Query: 369 LADVVVGHGAERELHRLLEVSAANLRNGVFLV 464
++ + REL L SAANL+ ++ +
Sbjct: 97 RVKGLIDARSWRELQAALRSSAANLKQDLYAI 128
>UniRef50_A1CKA8 Cluster: Cyclin; n=6; Trichocomaceae|Rep: Cyclin -
Aspergillus clavatus
Length = 586
Score = 32.3 bits (70), Expect = 8.4
Identities = 25/73 (34%), Positives = 33/73 (45%)
Frame = +2
Query: 62 PMSASLSHT*TGRGQAPCWCGGATRRTNRQDVSSGLSRWWRCPEVASETQFSCTGRRHPP 241
P + LS T + + P A R D++SG R R PE +SETQ +H P
Sbjct: 282 PTTPILSDEGTEKTRIPHAGSPANRPPAETDLNSGRKRS-REPESSSETQAGPPDSQHNP 340
Query: 242 PPGTWAGRPLKYP 280
P + GR K P
Sbjct: 341 PAPSNGGRSPKRP 353
>UniRef50_Q3MIN7 Cluster: Ral guanine nucleotide dissociation
stimulator-like 3; n=13; Theria|Rep: Ral guanine
nucleotide dissociation stimulator-like 3 - Homo sapiens
(Human)
Length = 710
Score = 32.3 bits (70), Expect = 8.4
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -1
Query: 262 TSPRSRRR-GVTTTCTAKLCLARDLGASPPSR*TRTNVLSVCPACRPTTPTWRLAPAGS 89
+SPR RRR +T +AKL + S + SV P P++P R APAGS
Sbjct: 511 SSPRIRRRISLTKRLSAKLAREKSSSPSGSPGDPSSPTSSVSPGSPPSSPRSRDAPAGS 569
>UniRef50_Q8TC90 Cluster: Uncharacterized protein C12orf12; n=6;
Eutheria|Rep: Uncharacterized protein C12orf12 - Homo
sapiens (Human)
Length = 406
Score = 32.3 bits (70), Expect = 8.4
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 125 GATRRTNRQDVSSGLSRWWRCPEVASETQFSCTGRR-HPPPPGTWAGRPLKYPCPL*LPR 301
G R+ +Q G +W P V S + C G PPPPG W K+PCP+ + R
Sbjct: 61 GPPRKQPKQQHGPG---FWFQPPVCSN--WGCWGGPWRPPPPGFW-----KFPCPVQVFR 110
Query: 302 LLGI 313
+ G+
Sbjct: 111 VYGL 114
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,043,170
Number of Sequences: 1657284
Number of extensions: 12860461
Number of successful extensions: 49020
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 46115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48972
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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