Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1884
(577 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein. 137 3e-32
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 137 3e-32
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 137 3e-32
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 137 3e-32
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 137 3e-32
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 137 3e-32
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 137 3e-32
BC111958-1|AAI11959.1| 710|Homo sapiens ral guanine nucleotide ... 32 1.3
BC101756-1|AAI01757.1| 710|Homo sapiens ral guanine nucleotide ... 32 1.3
BC034491-1|AAH34491.1| 406|Homo sapiens chromosome 12 open read... 32 1.3
BC027600-1|AAH27600.1| 406|Homo sapiens chromosome 12 open read... 32 1.3
BC026075-1|AAH26075.1| 406|Homo sapiens chromosome 12 open read... 32 1.3
BC024183-1|AAH24183.1| 406|Homo sapiens chromosome 12 open read... 32 1.3
AK074082-1|BAB84908.1| 497|Homo sapiens FLJ00153 protein protein. 32 1.3
BX000476-1|CAI41974.1| 384|Homo sapiens protein phosphatase 2 (... 29 8.9
AL954664-1|CAI41961.1| 384|Homo sapiens protein phosphatase 2 (... 29 8.9
AL732314-1|CAI41583.1| 384|Homo sapiens protein phosphatase 2 (... 29 8.9
AK074045-1|BAB84871.1| 678|Homo sapiens FLJ00103 protein protein. 29 8.9
>BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein.
Length = 475
Score = 137 bits (331), Expect = 3e-32
Identities = 74/121 (61%), Positives = 85/121 (70%), Gaps = 2/121 (1%)
Frame = -3
Query: 575 TEICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFALR 396
TEICQRACKLAIR++IE+EI RER R M+++E+DPVPEI R HFEEAM+FA R
Sbjct: 357 TEICQRACKLAIRESIESEIRRERERQTNPS--AMEVEEDDPVPEIRRDHFEEAMRFARR 414
Query: 395 SVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXGDQP--TFQEEGGDDDL 222
SVSDNDIRKYEMFAQTLQQSRGFG +FRFP+ G + E DDDL
Sbjct: 415 SVSDNDIRKYEMFAQTLQQSRGFG-SFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDL 473
Query: 221 Y 219
Y
Sbjct: 474 Y 474
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 137 bits (331), Expect = 3e-32
Identities = 74/121 (61%), Positives = 85/121 (70%), Gaps = 2/121 (1%)
Frame = -3
Query: 575 TEICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFALR 396
TEICQRACKLAIR++IE+EI RER R M+++E+DPVPEI R HFEEAM+FA R
Sbjct: 688 TEICQRACKLAIRESIESEIRRERERQTNPS--AMEVEEDDPVPEIRRDHFEEAMRFARR 745
Query: 395 SVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXGDQP--TFQEEGGDDDL 222
SVSDNDIRKYEMFAQTLQQSRGFG +FRFP+ G + E DDDL
Sbjct: 746 SVSDNDIRKYEMFAQTLQQSRGFG-SFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDL 804
Query: 221 Y 219
Y
Sbjct: 805 Y 805
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 137 bits (331), Expect = 3e-32
Identities = 74/121 (61%), Positives = 85/121 (70%), Gaps = 2/121 (1%)
Frame = -3
Query: 575 TEICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFALR 396
TEICQRACKLAIR++IE+EI RER R M+++E+DPVPEI R HFEEAM+FA R
Sbjct: 688 TEICQRACKLAIRESIESEIRRERERQTNPS--AMEVEEDDPVPEIRRDHFEEAMRFARR 745
Query: 395 SVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXGDQP--TFQEEGGDDDL 222
SVSDNDIRKYEMFAQTLQQSRGFG +FRFP+ G + E DDDL
Sbjct: 746 SVSDNDIRKYEMFAQTLQQSRGFG-SFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDL 804
Query: 221 Y 219
Y
Sbjct: 805 Y 805
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 137 bits (331), Expect = 3e-32
Identities = 74/121 (61%), Positives = 85/121 (70%), Gaps = 2/121 (1%)
Frame = -3
Query: 575 TEICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFALR 396
TEICQRACKLAIR++IE+EI RER R M+++E+DPVPEI R HFEEAM+FA R
Sbjct: 526 TEICQRACKLAIRESIESEIRRERERQTNPS--AMEVEEDDPVPEIRRDHFEEAMRFARR 583
Query: 395 SVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXGDQP--TFQEEGGDDDL 222
SVSDNDIRKYEMFAQTLQQSRGFG +FRFP+ G + E DDDL
Sbjct: 584 SVSDNDIRKYEMFAQTLQQSRGFG-SFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDL 642
Query: 221 Y 219
Y
Sbjct: 643 Y 643
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 137 bits (331), Expect = 3e-32
Identities = 74/121 (61%), Positives = 85/121 (70%), Gaps = 2/121 (1%)
Frame = -3
Query: 575 TEICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFALR 396
TEICQRACKLAIR++IE+EI RER R M+++E+DPVPEI R HFEEAM+FA R
Sbjct: 688 TEICQRACKLAIRESIESEIRRERERQTNPS--AMEVEEDDPVPEIRRDHFEEAMRFARR 745
Query: 395 SVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXGDQP--TFQEEGGDDDL 222
SVSDNDIRKYEMFAQTLQQSRGFG +FRFP+ G + E DDDL
Sbjct: 746 SVSDNDIRKYEMFAQTLQQSRGFG-SFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDL 804
Query: 221 Y 219
Y
Sbjct: 805 Y 805
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 137 bits (331), Expect = 3e-32
Identities = 74/121 (61%), Positives = 85/121 (70%), Gaps = 2/121 (1%)
Frame = -3
Query: 575 TEICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFALR 396
TEICQRACKLAIR++IE+EI RER R M+++E+DPVPEI R HFEEAM+FA R
Sbjct: 688 TEICQRACKLAIRESIESEIRRERERQTNPS--AMEVEEDDPVPEIRRDHFEEAMRFARR 745
Query: 395 SVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXGDQP--TFQEEGGDDDL 222
SVSDNDIRKYEMFAQTLQQSRGFG +FRFP+ G + E DDDL
Sbjct: 746 SVSDNDIRKYEMFAQTLQQSRGFG-SFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDL 804
Query: 221 Y 219
Y
Sbjct: 805 Y 805
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 137 bits (331), Expect = 3e-32
Identities = 74/121 (61%), Positives = 85/121 (70%), Gaps = 2/121 (1%)
Frame = -3
Query: 575 TEICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFALR 396
TEICQRACKLAIR++IE+EI RER R M+++E+DPVPEI R HFEEAM+FA R
Sbjct: 688 TEICQRACKLAIRESIESEIRRERERQTNPS--AMEVEEDDPVPEIRRDHFEEAMRFARR 745
Query: 395 SVSDNDIRKYEMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXGDQP--TFQEEGGDDDL 222
SVSDNDIRKYEMFAQTLQQSRGFG +FRFP+ G + E DDDL
Sbjct: 746 SVSDNDIRKYEMFAQTLQQSRGFG-SFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDL 804
Query: 221 Y 219
Y
Sbjct: 805 Y 805
>BC111958-1|AAI11959.1| 710|Homo sapiens ral guanine nucleotide
dissociation stimulator-like 3 protein.
Length = 710
Score = 32.3 bits (70), Expect = 1.3
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -1
Query: 262 TSPRSRRR-GVTTTCTAKLCLARDLGASPPSR*TRTNVLSVCPACRPTTPTWRLAPAGS 89
+SPR RRR +T +AKL + S + SV P P++P R APAGS
Sbjct: 511 SSPRIRRRISLTKRLSAKLAREKSSSPSGSPGDPSSPTSSVSPGSPPSSPRSRDAPAGS 569
>BC101756-1|AAI01757.1| 710|Homo sapiens ral guanine nucleotide
dissociation stimulator-like 3 protein.
Length = 710
Score = 32.3 bits (70), Expect = 1.3
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -1
Query: 262 TSPRSRRR-GVTTTCTAKLCLARDLGASPPSR*TRTNVLSVCPACRPTTPTWRLAPAGS 89
+SPR RRR +T +AKL + S + SV P P++P R APAGS
Sbjct: 511 SSPRIRRRISLTKRLSAKLAREKSSSPSGSPGDPSSPTSSVSPGSPPSSPRSRDAPAGS 569
>BC034491-1|AAH34491.1| 406|Homo sapiens chromosome 12 open reading
frame 12 protein.
Length = 406
Score = 32.3 bits (70), Expect = 1.3
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 125 GATRRTNRQDVSSGLSRWWRCPEVASETQFSCTGRR-HPPPPGTWAGRPLKYPCPL*LPR 301
G R+ +Q G +W P V S + C G PPPPG W K+PCP+ + R
Sbjct: 61 GPPRKQPKQQHGPG---FWFQPPVCSN--WGCWGGPWRPPPPGFW-----KFPCPVQVFR 110
Query: 302 LLGI 313
+ G+
Sbjct: 111 VYGL 114
>BC027600-1|AAH27600.1| 406|Homo sapiens chromosome 12 open reading
frame 12 protein.
Length = 406
Score = 32.3 bits (70), Expect = 1.3
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 125 GATRRTNRQDVSSGLSRWWRCPEVASETQFSCTGRR-HPPPPGTWAGRPLKYPCPL*LPR 301
G R+ +Q G +W P V S + C G PPPPG W K+PCP+ + R
Sbjct: 61 GPPRKQPKQQHGPG---FWFQPPVCSN--WGCWGGPWRPPPPGFW-----KFPCPVQVFR 110
Query: 302 LLGI 313
+ G+
Sbjct: 111 VYGL 114
>BC026075-1|AAH26075.1| 406|Homo sapiens chromosome 12 open reading
frame 12 protein.
Length = 406
Score = 32.3 bits (70), Expect = 1.3
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 125 GATRRTNRQDVSSGLSRWWRCPEVASETQFSCTGRR-HPPPPGTWAGRPLKYPCPL*LPR 301
G R+ +Q G +W P V S + C G PPPPG W K+PCP+ + R
Sbjct: 61 GPPRKQPKQQHGPG---FWFQPPVCSN--WGCWGGPWRPPPPGFW-----KFPCPVQVFR 110
Query: 302 LLGI 313
+ G+
Sbjct: 111 VYGL 114
>BC024183-1|AAH24183.1| 406|Homo sapiens chromosome 12 open reading
frame 12 protein.
Length = 406
Score = 32.3 bits (70), Expect = 1.3
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 125 GATRRTNRQDVSSGLSRWWRCPEVASETQFSCTGRR-HPPPPGTWAGRPLKYPCPL*LPR 301
G R+ +Q G +W P V S + C G PPPPG W K+PCP+ + R
Sbjct: 61 GPPRKQPKQQHGPG---FWFQPPVCSN--WGCWGGPWRPPPPGFW-----KFPCPVQVFR 110
Query: 302 LLGI 313
+ G+
Sbjct: 111 VYGL 114
>AK074082-1|BAB84908.1| 497|Homo sapiens FLJ00153 protein protein.
Length = 497
Score = 32.3 bits (70), Expect = 1.3
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -1
Query: 262 TSPRSRRR-GVTTTCTAKLCLARDLGASPPSR*TRTNVLSVCPACRPTTPTWRLAPAGS 89
+SPR RRR +T +AKL + S + SV P P++P R APAGS
Sbjct: 308 SSPRIRRRISLTKRLSAKLAREKSSSPSGSPGDPSSPTSSVSPGSPPSSPRSRDAPAGS 366
>BX000476-1|CAI41974.1| 384|Homo sapiens protein phosphatase 2
(formerly 2A), regulatory subunit B'', beta protein.
Length = 384
Score = 29.5 bits (63), Expect = 8.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 140 TNRQDVSSGLSRWWRCPEVASETQFSCTGRRHPPP 244
T R DV++G W R E S GR PPP
Sbjct: 63 TRRSDVNAGALVWERGRRARFEAALSSAGRTAPPP 97
>AL954664-1|CAI41961.1| 384|Homo sapiens protein phosphatase 2
(formerly 2A), regulatory subunit B'', beta protein.
Length = 384
Score = 29.5 bits (63), Expect = 8.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 140 TNRQDVSSGLSRWWRCPEVASETQFSCTGRRHPPP 244
T R DV++G W R E S GR PPP
Sbjct: 63 TRRSDVNAGALVWERGRRARFEAALSSAGRTAPPP 97
>AL732314-1|CAI41583.1| 384|Homo sapiens protein phosphatase 2
(formerly 2A), regulatory subunit B'', beta protein.
Length = 384
Score = 29.5 bits (63), Expect = 8.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 140 TNRQDVSSGLSRWWRCPEVASETQFSCTGRRHPPP 244
T R DV++G W R E S GR PPP
Sbjct: 63 TRRSDVNAGALVWERGRRARFEAALSSAGRTAPPP 97
>AK074045-1|BAB84871.1| 678|Homo sapiens FLJ00103 protein protein.
Length = 678
Score = 29.5 bits (63), Expect = 8.9
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 491 AAGDSSRDGSPPRWPGEWPACRLAG 565
A G R PP PG WP+C L G
Sbjct: 644 AVGTGQRGVQPPPLPGCWPSCCLPG 668
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,751,107
Number of Sequences: 237096
Number of extensions: 2054623
Number of successful extensions: 7002
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6986
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -