Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1884
         (577 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48334-9|CAA88314.1|  810|Caenorhabditis elegans Hypothetical pr...   135   2e-32
Z48045-12|CAA88105.1|  810|Caenorhabditis elegans Hypothetical p...   135   2e-32
Z49886-1|CAA90050.1|  809|Caenorhabditis elegans Hypothetical pr...   135   2e-32
U58750-2|AAB00642.1|  615|Caenorhabditis elegans Polo kinase pro...    29   3.1  
AF059024-1|AAC14425.1|  615|Caenorhabditis elegans polo-like kin...    29   3.1  
Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical p...    27   7.2  
Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical pr...    27   7.2  
AF016654-1|AAB66028.1|  731|Caenorhabditis elegans Hypothetical ...    27   7.2  
Z68753-3|CAA92988.3|  984|Caenorhabditis elegans Hypothetical pr...    27   9.5  
U41031-3|AAA82620.1|  164|Caenorhabditis elegans Hypothetical pr...    27   9.5  
U00063-2|AAK18961.1|  329|Caenorhabditis elegans Hypothetical pr...    27   9.5  
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    27   9.5  

>Z48334-9|CAA88314.1|  810|Caenorhabditis elegans Hypothetical
           protein C41C4.8 protein.
          Length = 810

 Score =  135 bits (327), Expect = 2e-32
 Identities = 66/92 (71%), Positives = 75/92 (81%), Gaps = 2/92 (2%)
 Frame = -3

Query: 575 TEICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEE--DPVPEISRAHFEEAMKFA 402
           TEICQRACKLAIR++IE EI +E+ R          M++E  DPVPEI+RAHFEEAMKFA
Sbjct: 693 TEICQRACKLAIRESIEREIRQEKERQDRSARGEELMEDELADPVPEITRAHFEEAMKFA 752

Query: 401 LRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFP 306
            RSV+DNDIRKYEMFAQTLQQSRGFG NF+FP
Sbjct: 753 RRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFP 784


>Z48045-12|CAA88105.1|  810|Caenorhabditis elegans Hypothetical
           protein C41C4.8 protein.
          Length = 810

 Score =  135 bits (327), Expect = 2e-32
 Identities = 66/92 (71%), Positives = 75/92 (81%), Gaps = 2/92 (2%)
 Frame = -3

Query: 575 TEICQRACKLAIRQAIEAEIHRERSRXXXXXXAVMDMDEE--DPVPEISRAHFEEAMKFA 402
           TEICQRACKLAIR++IE EI +E+ R          M++E  DPVPEI+RAHFEEAMKFA
Sbjct: 693 TEICQRACKLAIRESIEREIRQEKERQDRSARGEELMEDELADPVPEITRAHFEEAMKFA 752

Query: 401 LRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFP 306
            RSV+DNDIRKYEMFAQTLQQSRGFG NF+FP
Sbjct: 753 RRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFP 784


>Z49886-1|CAA90050.1|  809|Caenorhabditis elegans Hypothetical
           protein C06A1.1 protein.
          Length = 809

 Score =  135 bits (326), Expect = 2e-32
 Identities = 66/92 (71%), Positives = 74/92 (80%), Gaps = 2/92 (2%)
 Frame = -3

Query: 575 TEICQRACKLAIRQAIEAEIH--RERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFA 402
           TEICQRACKLAIR++IE EI   +ER         +M+ D  DPVPEI+RAHFEEAMKFA
Sbjct: 695 TEICQRACKLAIRESIEKEIRIEKERQDRQARGEELMEDDAVDPVPEITRAHFEEAMKFA 754

Query: 401 LRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFP 306
            RSV+DNDIRKYEMFAQTLQQSRGFG NF+FP
Sbjct: 755 RRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFP 786


>U58750-2|AAB00642.1|  615|Caenorhabditis elegans Polo kinase
           protein 3 protein.
          Length = 615

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = -2

Query: 396 LRVRQRHPQVRDVRADPAAEPRLRNQLQIPNKRGSYRGHGYFS 268
           LR R    Q ++ +  P   P + + +Q+P ++G++ G G F+
Sbjct: 5   LRTRGNSAQDKNKKHVPNVPPIIYDDMQVPYEKGAFLGEGGFA 47


>AF059024-1|AAC14425.1|  615|Caenorhabditis elegans polo-like kinase
           protein.
          Length = 615

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = -2

Query: 396 LRVRQRHPQVRDVRADPAAEPRLRNQLQIPNKRGSYRGHGYFS 268
           LR R    Q ++ +  P   P + + +Q+P ++G++ G G F+
Sbjct: 5   LRTRGNSAQDKNKKHVPNVPPIIYDDMQVPYEKGAFLGEGGFA 47


>Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical
           protein C34F6.10 protein.
          Length = 1441

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +2

Query: 191 EVASETQFSCTGRRHPPPPGTWAGRPLKYPCPL 289
           E+ S    S TG   P  P TW  +P  +P P+
Sbjct: 88  EMTSTEGTSSTGTGSPQEPKTWISQPGYHPVPI 120


>Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical
           protein C34F6.10 protein.
          Length = 1441

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +2

Query: 191 EVASETQFSCTGRRHPPPPGTWAGRPLKYPCPL 289
           E+ S    S TG   P  P TW  +P  +P P+
Sbjct: 88  EMTSTEGTSSTGTGSPQEPKTWISQPGYHPVPI 120


>AF016654-1|AAB66028.1|  731|Caenorhabditis elegans Hypothetical
           protein C17A2.5 protein.
          Length = 731

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -3

Query: 125 HHTNMAPGPGRFTYAIV 75
           +HT++ PGPG+F  A++
Sbjct: 491 NHTSLEPGPGKFKLAVI 507


>Z68753-3|CAA92988.3|  984|Caenorhabditis elegans Hypothetical
           protein ZC518.2 protein.
          Length = 984

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +2

Query: 188 PEVASETQFSCTGRRHPPPPGTWAGRPLKYPCP 286
           P  +  TQ S  G   PPPP     RP  +P P
Sbjct: 107 PSFSPATQPSMNGHHAPPPPA--VSRPPAFPTP 137


>U41031-3|AAA82620.1|  164|Caenorhabditis elegans Hypothetical
           protein C16B8.3 protein.
          Length = 164

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 221 TGRRHPPPPGTWAGRPLKY 277
           TG+  PPPPG + G P  Y
Sbjct: 146 TGQYPPPPPGQYPGYPRPY 164


>U00063-2|AAK18961.1|  329|Caenorhabditis elegans Hypothetical
           protein F56C9.6 protein.
          Length = 329

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -2

Query: 408 VRAPLRVRQRHPQVRDVRADPAAEPRLRN 322
           V +P+R+ QR+P+  D    P++EP+  N
Sbjct: 266 VPSPIRIGQRYPKRPDNMPKPSSEPKHLN 294


>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
            protein F59E12.9 protein.
          Length = 1621

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = -2

Query: 567  MPASLQAGHSPGHRGGDPSREESPAASRRCRYG 469
            MP  +  GH    RGG P R   P    R R G
Sbjct: 1435 MPPPVMGGHEGSWRGGPPMRGMPPLGMMRGRGG 1467


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,372,718
Number of Sequences: 27780
Number of extensions: 279286
Number of successful extensions: 905
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)