Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1883
         (723 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    24   1.4  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    24   1.4  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        24   1.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.6  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   7.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   7.6  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   7.6  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 359 RKRNPKRKTMTHTNCFP 409
           RK +P+  T+ HT+C P
Sbjct: 343 RKVSPRVNTIKHTSCIP 359


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 359 RKRNPKRKTMTHTNCFP 409
           RK +P+  T+ HT+C P
Sbjct: 343 RKVSPRVNTIKHTSCIP 359


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +2

Query: 578 TDVSDRISSEVNPSPCESESTSNSPPSLLEDATLPAPFSLLEPST 712
           T     + +E+ PSP    STS + P     A  P P   + PS+
Sbjct: 312 TPTPTSVMTELYPSPVPGHSTSPNLPLTHNIAHNPYPSHSIYPSS 356


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 47  FYFLREYYNTKF-LRRYCNSILNVTKICN 130
           FY++ +    +F + R CN +  V K+ N
Sbjct: 232 FYYMHQQIIARFNIERLCNGLKRVVKLSN 260


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 386 LFCV*GFVFDRHLLFDIFVFLLLTLSMILL 297
           LFC    +F  HLLF + ++      +ILL
Sbjct: 267 LFCCAFIIFTMHLLFLLCIYYFYCALIILL 296


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 708 DGSKRLKGAGSVASSSRDGGEFEVDSDS 625
           D  KR+K  G    S  +G + E D D+
Sbjct: 7   DCPKRMKWEGGEEGSPEEGDKLEGDEDT 34


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 12/49 (24%), Positives = 22/49 (44%)
 Frame = -1

Query: 633  SDSQGLGLTSLDIRSETSVPGSGLGLFAFGSAWSKLHRGDVPPRYPHGI 487
            S   G+  T +  ++E  VP + + + A   +   +     PP  P+GI
Sbjct: 1182 SGGDGVRTTPIHCQTEQDVPEAPIAVKALVMSTDSILASWKPPVEPNGI 1230


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -1

Query: 717 NNVDGSKRLKGAGSVASSSRDGGEFEVDSDS 625
           NN + +    GA SV SSS      E DS S
Sbjct: 137 NNTNFNNNSNGASSVGSSSPFDKLIEEDSRS 167


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -1

Query: 717 NNVDGSKRLKGAGSVASSSRDGGEFEVDSDS 625
           NN + +    GA SV SSS      E DS S
Sbjct: 85  NNTNFNNNSNGASSVGSSSPFDKLIEEDSRS 115


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -1

Query: 717 NNVDGSKRLKGAGSVASSSRDGGEFEVDSDS 625
           NN + +    GA SV SSS      E DS S
Sbjct: 268 NNTNFNNNSNGASSVGSSSPFDKLIEEDSRS 298


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,038
Number of Sequences: 336
Number of extensions: 3221
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)