Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1883
(723 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L08502-1|AAA28310.1| 766|Drosophila melanogaster developmental ... 34 0.23
AE014134-1110|AAF52400.1| 766|Drosophila melanogaster CG9554-PA... 34 0.23
AY084186-1|AAL89924.1| 834|Drosophila melanogaster RE69157p pro... 32 0.69
AE014134-2102|AAF53125.2| 371|Drosophila melanogaster CG31757-P... 32 0.69
AY119485-1|AAM50139.1| 846|Drosophila melanogaster GH07623p pro... 30 3.7
AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA... 30 3.7
AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB... 30 3.7
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA... 29 4.8
BT016109-1|AAV36994.1| 496|Drosophila melanogaster LD14545p pro... 29 8.5
AY069099-1|AAL39244.1| 562|Drosophila melanogaster GH11670p pro... 29 8.5
AE014296-1574|AAF50325.2| 562|Drosophila melanogaster CG32031-P... 29 8.5
AE014134-2133|AAF53147.2| 496|Drosophila melanogaster CG5304-PA... 29 8.5
>L08502-1|AAA28310.1| 766|Drosophila melanogaster developmental
protein eya II protein.
Length = 766
Score = 33.9 bits (74), Expect = 0.23
Identities = 21/42 (50%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 476 MVTLMPCGYLGGTSPRCSL--DHAEPKAKRPRPDPGTDVSDR 595
MVTLMP Y +PRC L EPK KRP+ D TD +R
Sbjct: 1 MVTLMPYNY---AAPRCGLIDKMIEPKVKRPKTD-HTDTHER 38
>AE014134-1110|AAF52400.1| 766|Drosophila melanogaster CG9554-PA,
isoform A protein.
Length = 766
Score = 33.9 bits (74), Expect = 0.23
Identities = 21/42 (50%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 476 MVTLMPCGYLGGTSPRCSL--DHAEPKAKRPRPDPGTDVSDR 595
MVTLMP Y +PRC L EPK KRP+ D TD +R
Sbjct: 1 MVTLMPYNY---AAPRCGLIDKMIEPKVKRPKTD-HTDTHER 38
>AY084186-1|AAL89924.1| 834|Drosophila melanogaster RE69157p
protein.
Length = 834
Score = 32.3 bits (70), Expect = 0.69
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +2
Query: 524 CSLDHAEPKAKRPRPDPGTDVSDRISSE---VNPSPCESESTSNSPPSLLEDATLPAPFS 694
CSL A P PG D D I S V+ +P ++ S PPS T+ P
Sbjct: 170 CSLQEASPGGAGAGVTPGADNQDSIESRTKGVSQAP-QTHSGPTGPPSNTSSETIAQPAP 228
Query: 695 LLEPS 709
L+P+
Sbjct: 229 KLQPA 233
>AE014134-2102|AAF53125.2| 371|Drosophila melanogaster CG31757-PA
protein.
Length = 371
Score = 32.3 bits (70), Expect = 0.69
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +2
Query: 524 CSLDHAEPKAKRPRPDPGTDVSDRISSE---VNPSPCESESTSNSPPSLLEDATLPAPFS 694
CSL A P PG D D I S V+ +P ++ S PPS T+ P
Sbjct: 170 CSLQEASPGGAGAGVTPGADNQDSIESRTKGVSQAP-QTHSGPTGPPSNTSSETIAQPAP 228
Query: 695 LLEPS 709
L+P+
Sbjct: 229 KLQPA 233
>AY119485-1|AAM50139.1| 846|Drosophila melanogaster GH07623p
protein.
Length = 846
Score = 29.9 bits (64), Expect = 3.7
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +2
Query: 545 PKAKRPRPDPGTDVSDRISSEVNPSPCESESTSNSPPSLLEDATLPAPFSLLEP 706
P+ P+ +P + S P P S PP +E PAP +L+ P
Sbjct: 98 PRPASPKVEPPPPAPPGVESPPGPQPPASPRFDPPPPHTIEPPPPPAPPTLVPP 151
>AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA,
isoform A protein.
Length = 1109
Score = 29.9 bits (64), Expect = 3.7
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +2
Query: 545 PKAKRPRPDPGTDVSDRISSEVNPSPCESESTSNSPPSLLEDATLPAPFSLLEP 706
P+ P+ +P + S P P S PP +E PAP +L+ P
Sbjct: 361 PRPASPKVEPPPPAPPGVESPPGPQPPASPRFDPPPPHTIEPPPPPAPPTLVPP 414
>AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB,
isoform B protein.
Length = 1150
Score = 29.9 bits (64), Expect = 3.7
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +2
Query: 545 PKAKRPRPDPGTDVSDRISSEVNPSPCESESTSNSPPSLLEDATLPAPFSLLEP 706
P+ P+ +P + S P P S PP +E PAP +L+ P
Sbjct: 361 PRPASPKVEPPPPAPPGVESPPGPQPPASPRFDPPPPHTIEPPPPPAPPTLVPP 414
>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
protein.
Length = 2284
Score = 29.5 bits (63), Expect = 4.8
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Frame = +2
Query: 500 YLGGTSPRCSLDHAEPKAKRPRPDPGTDVSDRISSEVNPSP-CESESTSNSPPSLLEDAT 676
+L PRC EP RP P T + I+S P P C S S + +
Sbjct: 331 HLISPKPRCYPGSNEPGCPRPTSPPPTTIRIPIASTFTPRPRCYPGSNDPSCNETPQTTS 390
Query: 677 LPA-PFSLLEP 706
LP+ P +P
Sbjct: 391 LPSCPLGSTDP 401
>BT016109-1|AAV36994.1| 496|Drosophila melanogaster LD14545p
protein.
Length = 496
Score = 28.7 bits (61), Expect = 8.5
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -1
Query: 708 DGSKRLKGAGSVASSSRDGGEFEVDSDSQGLGLTSLDI-RSETSVPGSGLGLFAFGSAWS 532
D S+ + + + GG+FE + QGL L+S I T +PG GL FG W+
Sbjct: 57 DDSEAICEPDDIDEGTSVGGDFEWSEELQGLILSSFYIGYIVTHIPG-GLLAEKFGGKWT 115
>AY069099-1|AAL39244.1| 562|Drosophila melanogaster GH11670p
protein.
Length = 562
Score = 28.7 bits (61), Expect = 8.5
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 542 EPKAKRPRPDPGTDVSDRISSEVNPSPCESESTSNSPPSLLEDATLPAPFSLLEPST 712
E A +P+P+P V + + P+P ++ +S PP + +P P SL E +T
Sbjct: 93 EEPAPKPKPEP---VPSPVVAPPKPTPPPAKPSS--PPKQADKMPIPLPKSLTEANT 144
>AE014296-1574|AAF50325.2| 562|Drosophila melanogaster CG32031-PA,
isoform A protein.
Length = 562
Score = 28.7 bits (61), Expect = 8.5
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 542 EPKAKRPRPDPGTDVSDRISSEVNPSPCESESTSNSPPSLLEDATLPAPFSLLEPST 712
E A +P+P+P V + + P+P ++ +S PP + +P P SL E +T
Sbjct: 93 EEPAPKPKPEP---VPSPVVAPPKPTPPPAKPSS--PPKQADKMPIPLPKSLTEANT 144
>AE014134-2133|AAF53147.2| 496|Drosophila melanogaster CG5304-PA
protein.
Length = 496
Score = 28.7 bits (61), Expect = 8.5
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -1
Query: 708 DGSKRLKGAGSVASSSRDGGEFEVDSDSQGLGLTSLDI-RSETSVPGSGLGLFAFGSAWS 532
D S+ + + + GG+FE + QGL L+S I T +PG GL FG W+
Sbjct: 57 DDSEAICEPDDIDEGTSVGGDFEWSEELQGLILSSFYIGYIVTHIPG-GLLAEKFGGKWT 115
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,810,353
Number of Sequences: 53049
Number of extensions: 621312
Number of successful extensions: 2617
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2601
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -