Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1874
         (879 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5C0A4 Cluster: SJCHGC09205 protein; n=1; Schistosoma j...    42   0.027
UniRef50_Q24333 Cluster: Elastin like protein; n=1; Drosophila m...    42   0.027
UniRef50_Q0P6N7 Cluster: Plasma memebrane H+-ATPase; n=1; Planta...    41   0.036
UniRef50_Q4YAZ4 Cluster: Putative uncharacterized protein; n=1; ...    40   0.063
UniRef50_Q86SD1 Cluster: Calumenin homologue; n=2; Eukaryota|Rep...    36   1.0  
UniRef50_UPI00015B4DD4 Cluster: PREDICTED: similar to ENSANGP000...    35   2.4  
UniRef50_Q1ZXG7 Cluster: Putative uncharacterized protein; n=1; ...    34   4.1  
UniRef50_Q54D34 Cluster: Putative uncharacterized protein rad17;...    34   5.5  
UniRef50_Q4DJV1 Cluster: Putative uncharacterized protein; n=3; ...    33   7.2  

>UniRef50_Q5C0A4 Cluster: SJCHGC09205 protein; n=1; Schistosoma
          japonicum|Rep: SJCHGC09205 protein - Schistosoma
          japonicum (Blood fluke)
          Length = 215

 Score = 41.5 bits (93), Expect = 0.027
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = +1

Query: 16 SRRAVAAALELVDPPGCRNSA 78
          S  AVAAALELVDPPGCRNSA
Sbjct: 3  SSTAVAAALELVDPPGCRNSA 23


>UniRef50_Q24333 Cluster: Elastin like protein; n=1; Drosophila
          melanogaster|Rep: Elastin like protein - Drosophila
          melanogaster (Fruit fly)
          Length = 110

 Score = 41.5 bits (93), Expect = 0.027
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = +1

Query: 16 SRRAVAAALELVDPPGCRNSA 78
          S  AVAAALELVDPPGCRNSA
Sbjct: 2  SSTAVAAALELVDPPGCRNSA 22


>UniRef50_Q0P6N7 Cluster: Plasma memebrane H+-ATPase; n=1;
          Plantago major|Rep: Plasma memebrane H+-ATPase -
          Plantago major (Common plantain)
          Length = 106

 Score = 41.1 bits (92), Expect = 0.036
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = +1

Query: 16 SRRAVAAALELVDPPGCRNSA 78
          S  AVAAALELVDPPGCRNSA
Sbjct: 3  SSPAVAAALELVDPPGCRNSA 23


>UniRef50_Q4YAZ4 Cluster: Putative uncharacterized protein; n=1;
          Plasmodium berghei|Rep: Putative uncharacterized
          protein - Plasmodium berghei
          Length = 89

 Score = 40.3 bits (90), Expect = 0.063
 Identities = 19/23 (82%), Positives = 19/23 (82%)
 Frame = +1

Query: 7  KRSSRRAVAAALELVDPPGCRNS 75
          K  S  AVAAALELVDPPGCRNS
Sbjct: 6  KSWSSTAVAAALELVDPPGCRNS 28


>UniRef50_Q86SD1 Cluster: Calumenin homologue; n=2; Eukaryota|Rep:
           Calumenin homologue - Ciona intestinalis (Transparent
           sea squirt)
          Length = 308

 Score = 36.3 bits (80), Expect = 1.0
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = +1

Query: 7   KRSSRRAVAAALELVDPPGCR 69
           K  S  AVAAALELVDPPGCR
Sbjct: 119 KSWSSTAVAAALELVDPPGCR 139


>UniRef50_UPI00015B4DD4 Cluster: PREDICTED: similar to
           ENSANGP00000010532; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000010532 - Nasonia
           vitripennis
          Length = 931

 Score = 35.1 bits (77), Expect = 2.4
 Identities = 19/53 (35%), Positives = 25/53 (47%)
 Frame = +1

Query: 52  DPPGCRNSAAADPFNLDVSMTHLLNENTNNNVKSTTGSKKSHSPEKNRRNKLS 210
           D P C NS  A+P   DV++T   N    NN    TG+ + H  E   R+  S
Sbjct: 280 DEPACVNSTTAEPLQ-DVNVTSDTNNEFTNNQVIPTGNVQLHEEETTNRSNES 331


>UniRef50_Q1ZXG7 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 379

 Score = 34.3 bits (75), Expect = 4.1
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1

Query: 100 DVSMTHLLNENTNNNVKSTTGSKKSHSPEKNRRNK 204
           D+SM H  N+  NNN  S      S  PEK RR +
Sbjct: 247 DISMNHYDNDTNNNNTFSRKNKPVSEKPEKRRRKQ 281


>UniRef50_Q54D34 Cluster: Putative uncharacterized protein rad17;
           n=1; Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein rad17 - Dictyostelium discoideum
           AX4
          Length = 1191

 Score = 33.9 bits (74), Expect = 5.5
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +1

Query: 70  NSAAADPFNLDVSMTHLLNENTNNNVKSTTGSKKSHSPEKNRRN 201
           N   ++ FN+  SM+++   NTN+N+ +TT    +++   N  N
Sbjct: 455 NIPRSNSFNIKTSMSNIKRNNTNSNINTTTTISNNNNNNNNNNN 498


>UniRef50_Q4DJV1 Cluster: Putative uncharacterized protein; n=3;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 470

 Score = 33.5 bits (73), Expect = 7.2
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = -2

Query: 191 FFSGLWLFLEPVVDLTLLFVFSFNKCVILTSKL 93
           FF G ++  + + ++ LLF+FSFN C+ +T  +
Sbjct: 52  FFFGSFILFKIIYEMKLLFIFSFNSCLRVTGSV 84


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 726,644,939
Number of Sequences: 1657284
Number of extensions: 12419456
Number of successful extensions: 70061
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 36486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62825
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)