Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1874
         (879 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative dodecenoy...    26   1.3  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        25   3.0  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   9.3  

>CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative
           dodecenoylCoA deltaisomerase protein.
          Length = 324

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 683 KQMFKIDFHGEGITSCNANQTRKIIICVITG 775
           +Q   I  H EG+        RK ++C ITG
Sbjct: 118 QQALSIVHHPEGVMGPTRRMIRKPLVCAITG 148


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 63  LQEFGGGGSFQLRCQYDTL 119
           L+ FGGGG     CQ  TL
Sbjct: 327 LERFGGGGERHKSCQIQTL 345


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
            topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 130  NTNNNVKSTTGSKKSHSPEKNRRNK 204
            + N N  S++G K SHS   + + K
Sbjct: 964  SNNTNSSSSSGKKSSHSGTNSSKRK 988


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 778,000
Number of Sequences: 2352
Number of extensions: 13650
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)