Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1874
(879 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF231339-1|AAF71307.1| 572|Homo sapiens bHLH-PAS transcription ... 31 7.3
Y18880-1|CAB56154.1| 715|Homo sapiens midline 2 protein protein. 30 9.6
U53930-1|AAD10841.1| 312|Homo sapiens olfactory receptor 17-30 ... 30 9.6
U04681-1|AAA18345.1| 215|Homo sapiens olfactory receptor protein. 30 9.6
BT006663-1|AAP35309.1| 685|Homo sapiens midline 2 protein. 30 9.6
BC018091-1|AAH18091.1| 214|Homo sapiens N-6 adenine-specific DN... 30 9.6
BC017707-1|AAH17707.1| 685|Homo sapiens midline 2 protein. 30 9.6
AY625004-1|AAT48105.1| 685|Homo sapiens TRIM1 beta protein. 30 9.6
AL512652-2|CAH71794.1| 214|Homo sapiens novel protein protein. 30 9.6
AL109946-4|CAO72054.1| 685|Homo sapiens midline 2 protein. 30 9.6
AL109946-3|CAO72053.1| 715|Homo sapiens midline 2 protein. 30 9.6
AL034399-3|CAI42074.1| 685|Homo sapiens midline 2 protein. 30 9.6
AL034399-2|CAI42073.1| 715|Homo sapiens midline 2 protein. 30 9.6
AF399534-1|AAK95019.1| 215|Homo sapiens olfactory receptor prot... 30 9.6
AF399533-1|AAK95018.1| 215|Homo sapiens olfactory receptor prot... 30 9.6
AF196481-1|AAF07341.1| 685|Homo sapiens RING finger protein pro... 30 9.6
AF087923-1|AAF37313.1| 312|Homo sapiens olfactory receptor 17-3... 30 9.6
AF087922-1|AAF37312.1| 312|Homo sapiens olfactory receptor 17-3... 30 9.6
>AF231339-1|AAF71307.1| 572|Homo sapiens bHLH-PAS transcription
factor MOP9 protein.
Length = 572
Score = 30.7 bits (66), Expect = 7.3
Identities = 18/54 (33%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Frame = +1
Query: 58 PGCRNSAAADPFNLDVSMTHLLNENTNNNVKSTTGSKKSHS-PEKNRRNKLSGL 216
P R + +DP + + +T+LL+ T + +++GS+++HS EK RR+K++ L
Sbjct: 12 PRKRKGSDSDPSHQN-PLTYLLS--TRIEISASSGSREAHSQTEKRRRDKMNNL 62
>Y18880-1|CAB56154.1| 715|Homo sapiens midline 2 protein protein.
Length = 715
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +1
Query: 82 ADPFNLDVSMTHLLNENTNNNV---KSTTGSKKSHSPEK 189
+ PF LD MTH + +N+ + K + KKSH+PE+
Sbjct: 513 SQPFKLDPKMTHKKLKISNDGLQMEKDESSLKKSHTPER 551
>U53930-1|AAD10841.1| 312|Homo sapiens olfactory receptor 17-30
protein.
Length = 312
Score = 30.3 bits (65), Expect = 9.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 455 YYLFIDLRKLLWNVCATRHIIKLRII 378
+YLF D+ LLW C+ HII +I
Sbjct: 175 HYLFCDMYILLWLACSNTHIIHTALI 200
>U04681-1|AAA18345.1| 215|Homo sapiens olfactory receptor protein.
Length = 215
Score = 30.3 bits (65), Expect = 9.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 455 YYLFIDLRKLLWNVCATRHIIKLRII 378
+YLF D+ LLW C+ HII +I
Sbjct: 108 HYLFCDMYILLWLACSNTHIIHTALI 133
>BT006663-1|AAP35309.1| 685|Homo sapiens midline 2 protein.
Length = 685
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +1
Query: 82 ADPFNLDVSMTHLLNENTNNNV---KSTTGSKKSHSPEK 189
+ PF LD MTH + +N+ + K + KKSH+PE+
Sbjct: 483 SQPFKLDPKMTHKKLKISNDGLQMEKDESSLKKSHTPER 521
>BC018091-1|AAH18091.1| 214|Homo sapiens N-6 adenine-specific DNA
methyltransferase 2 (putative) protein.
Length = 214
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 746 RKIIICVITGGTISCESAPGRYHHPA*FCRESSNAFRFE 862
++ I V GG I+C SAP Y CRE+ + + FE
Sbjct: 65 QEAIAAVGEGGRIACVSAPSVYQKLRELCRENFSIYIFE 103
>BC017707-1|AAH17707.1| 685|Homo sapiens midline 2 protein.
Length = 685
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +1
Query: 82 ADPFNLDVSMTHLLNENTNNNV---KSTTGSKKSHSPEK 189
+ PF LD MTH + +N+ + K + KKSH+PE+
Sbjct: 483 SQPFKLDPKMTHKKLKISNDGLQMEKDESSLKKSHTPER 521
>AY625004-1|AAT48105.1| 685|Homo sapiens TRIM1 beta protein.
Length = 685
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +1
Query: 82 ADPFNLDVSMTHLLNENTNNNV---KSTTGSKKSHSPEK 189
+ PF LD MTH + +N+ + K + KKSH+PE+
Sbjct: 483 SQPFKLDPKMTHKKLKISNDGLQMEKDESSLKKSHTPER 521
>AL512652-2|CAH71794.1| 214|Homo sapiens novel protein protein.
Length = 214
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 746 RKIIICVITGGTISCESAPGRYHHPA*FCRESSNAFRFE 862
++ I V GG I+C SAP Y CRE+ + + FE
Sbjct: 65 QEAIAAVGEGGRIACVSAPSVYQKLRELCRENFSIYIFE 103
>AL109946-4|CAO72054.1| 685|Homo sapiens midline 2 protein.
Length = 685
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +1
Query: 82 ADPFNLDVSMTHLLNENTNNNV---KSTTGSKKSHSPEK 189
+ PF LD MTH + +N+ + K + KKSH+PE+
Sbjct: 483 SQPFKLDPKMTHKKLKISNDGLQMEKDESSLKKSHTPER 521
>AL109946-3|CAO72053.1| 715|Homo sapiens midline 2 protein.
Length = 715
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +1
Query: 82 ADPFNLDVSMTHLLNENTNNNV---KSTTGSKKSHSPEK 189
+ PF LD MTH + +N+ + K + KKSH+PE+
Sbjct: 513 SQPFKLDPKMTHKKLKISNDGLQMEKDESSLKKSHTPER 551
>AL034399-3|CAI42074.1| 685|Homo sapiens midline 2 protein.
Length = 685
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +1
Query: 82 ADPFNLDVSMTHLLNENTNNNV---KSTTGSKKSHSPEK 189
+ PF LD MTH + +N+ + K + KKSH+PE+
Sbjct: 483 SQPFKLDPKMTHKKLKISNDGLQMEKDESSLKKSHTPER 521
>AL034399-2|CAI42073.1| 715|Homo sapiens midline 2 protein.
Length = 715
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +1
Query: 82 ADPFNLDVSMTHLLNENTNNNV---KSTTGSKKSHSPEK 189
+ PF LD MTH + +N+ + K + KKSH+PE+
Sbjct: 513 SQPFKLDPKMTHKKLKISNDGLQMEKDESSLKKSHTPER 551
>AF399534-1|AAK95019.1| 215|Homo sapiens olfactory receptor
protein.
Length = 215
Score = 30.3 bits (65), Expect = 9.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 455 YYLFIDLRKLLWNVCATRHIIKLRII 378
+YLF D+ LLW C+ HII +I
Sbjct: 108 HYLFCDMYILLWLACSNTHIIHTALI 133
>AF399533-1|AAK95018.1| 215|Homo sapiens olfactory receptor
protein.
Length = 215
Score = 30.3 bits (65), Expect = 9.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 455 YYLFIDLRKLLWNVCATRHIIKLRII 378
+YLF D+ LLW C+ HII +I
Sbjct: 108 HYLFCDMYILLWLACSNTHIIHTALI 133
>AF196481-1|AAF07341.1| 685|Homo sapiens RING finger protein
protein.
Length = 685
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +1
Query: 82 ADPFNLDVSMTHLLNENTNNNV---KSTTGSKKSHSPEK 189
+ PF LD MTH + +N+ + K + KKSH+PE+
Sbjct: 483 SQPFKLDPKMTHKKLKISNDGLQMEKDESSLKKSHTPER 521
>AF087923-1|AAF37313.1| 312|Homo sapiens olfactory receptor 17-31
protein.
Length = 312
Score = 30.3 bits (65), Expect = 9.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 455 YYLFIDLRKLLWNVCATRHIIKLRII 378
+YLF D+ LLW C+ HII +I
Sbjct: 175 HYLFCDMYILLWLACSNTHIIHTALI 200
>AF087922-1|AAF37312.1| 312|Homo sapiens olfactory receptor 17-30
protein.
Length = 312
Score = 30.3 bits (65), Expect = 9.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 455 YYLFIDLRKLLWNVCATRHIIKLRII 378
+YLF D+ LLW C+ HII +I
Sbjct: 175 HYLFCDMYILLWLACSNTHIIHTALI 200
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,245,862
Number of Sequences: 237096
Number of extensions: 1821490
Number of successful extensions: 3346
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3346
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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